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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
4.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
3.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
2.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
1.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
1.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
1.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC34A2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
607.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
443.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
409.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
368.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
233.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
230.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
202.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
196.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
166.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
159.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
159.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
159.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
157.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
154.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
151.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
137.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
137.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
135.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
117.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
116.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
114.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
112.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
111.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
107.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
106.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
93.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
91.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
91.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
91.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
88.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
87.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
86.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
86.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
85.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
84.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
83.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
80.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
80.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
77.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
75.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
71.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
67.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
64.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
63.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
61.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
58.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
57.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
56.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
56.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
56.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
54.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
54.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
53.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
53.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
51.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
51.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
51.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
50.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
48.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
47.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
45.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
45.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
44.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
42.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
41.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
41.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
40.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
40.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
40.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
40.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
40.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
39.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
39.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
38.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
37.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
36.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
36.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
34.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
34.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
33.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
32.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
32.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
31.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
31.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
31.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
31.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
31.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
30.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
30.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
30.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
30.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
29.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
29.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
29.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
29.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
29.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
29.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
29.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
28.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
27.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
27.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
27.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
26.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
25.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
25.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
25.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
25.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
24.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
24.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
24.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
23.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
23.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
23.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
23.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
23.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
22.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
22.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
22.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
22.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
22.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
22.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
22.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
21.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
21.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
21.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
21.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
21.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
21.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
21.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
20.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
20.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
20.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
20.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
20.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
19.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
19.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
19.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
19.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
19.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
18.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
18.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
18.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
18.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
17.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
17.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
17.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
17.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
17.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
17.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
17.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
16.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
16.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
16.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
15.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
15.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
14.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
14.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
14.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
14.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
13.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
13.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
13.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
13.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
13.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
12.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
12.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
12.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
12.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
11.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
11.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
11.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
11.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
11.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
11.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
11.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
10.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
10.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
10.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
9.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
9.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
9.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
9.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
9.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
9.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
9.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
9.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
9.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
8.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
8.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
8.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
7.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
7.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
7.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
7.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
7.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
7.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
7.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
7.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
6.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
6.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
6.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
6.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
6.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
6.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
6.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
6.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
6.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
6.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
6.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
6.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
5.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
5.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
5.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
5.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
5.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
5.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
5.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
5.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
5.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
5.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
5.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
5.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
5.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
5.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
5.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
4.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
4.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
4.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
4.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
4.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
4.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
4.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
4.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
4.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
4.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
4.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
3.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
3.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
3.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
3.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
3.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
3.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
3.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
3.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
3.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
3.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
3.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
3.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
3.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
3.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
3.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
2.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
2.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
2.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
2.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
2.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
2.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
2.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
2.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
2.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
2.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
2.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
2.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
2.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
2.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
1.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
1.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
1.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
1.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
1.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
1.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
1.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
1.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
1.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
1.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
1.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
1.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
1.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
1.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
1.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
1.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
1.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
1.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
1.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
1.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
1.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
1.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
1.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
1.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
1.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
1.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
1.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
1.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
1.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
1.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
1.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
1.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
1.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
1.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
1.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
1.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
1.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
1.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
1.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
1.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
1.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
1.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
1.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
0.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
0.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
0.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
0.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
0.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
0.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
0.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
0.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
0.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
0.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
0.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
0.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
0.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
0.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
0.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
0.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
0.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
0.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
0.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
0.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
0.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
0.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
0.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
0.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
0.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
0.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
0.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
0.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
0.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
0.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
0.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
0.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
0.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
0.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
0.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
0.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
0.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
0.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
0.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
0.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
0.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
0.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
0.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
0.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
0.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
0.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
0.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
0.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
0.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
0.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
0.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
0.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
0.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
0.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
0.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
0.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
0.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
0.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
0.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
0.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
0.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
0.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
0.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
0.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
0.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
0.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
0.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
0.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
0.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
0.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
0.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
0.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
0.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
0.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
0.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
0.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
0.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
0.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
0.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
0.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
0.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
0.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
0.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
0.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
0.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
0.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
0.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
0.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
0.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
0.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
0.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
0.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
0.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
0.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
0.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
0.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
0.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
0.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
0.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
0.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
0.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
0.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
0.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
0.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
0.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
0.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
0.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
0.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
0.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
0.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
0.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
0.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
0.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
0.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
0.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
0.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
0.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
0.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
0.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
0.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
0.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
0.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
0.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
0.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
0.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
0.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
0.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
0.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
0.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
0.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
0.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
0.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
0.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
0.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
0.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
0.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
0.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
0.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
0.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
0.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
0.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
0.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
0.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
0.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
0.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
0.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
0.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
0.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
0.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
0.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
0.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
0.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
0.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
0.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
0.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
0.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
0.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
0.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
0.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
0.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
0.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
0.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
0.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
0.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
0.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC34A2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
247.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
188.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
165.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
164.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
149.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
140.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
110.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
88.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
68.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
64.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
57.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
50.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
43.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
43.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
40.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
38.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
31.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
31.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
31.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
26.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
26.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
26.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
25.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
24.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
24.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
23.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
17.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
16.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
16.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
14.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
14.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
13.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
11.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
10.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
10.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
10.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
9.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
9.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
9.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
9.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
9.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
8.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
7.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
6.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
5.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
3.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
3.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
3.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
2.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
2.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
2.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
1.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
1.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
1.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
1.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
1.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
0.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
0.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
0.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
0.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
0.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
0.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
0.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
0.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
0.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
0.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
0.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
0.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
0.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
0.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
0.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
0.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
0.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
0.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
0.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
0.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
0.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
0.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
0.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
0.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
0.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
0.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
0.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
0.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
0.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
0.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
0.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
0.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
0.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
0.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
0.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
0.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
0.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
0.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
0.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
0.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC34A2 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
171.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
1190.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
1016.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
980.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
936.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
812.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
780.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
744.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
666.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
653.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
646.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
580.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
564.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
530.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
517.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
501.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
500.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
495.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
494.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
488.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
484.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
480.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
478.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
477.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
476.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
451.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
442.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
414.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
412.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
410.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
407.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
396.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
369.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
361.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
358.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
356.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
355.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
348.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
340.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
336.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
329.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
327.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
323.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
323.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
322.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
322.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
318.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
317.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
310.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
310.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
308.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
307.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
305.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
300.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
297.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
294.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
293.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
292.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
289.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
284.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
284.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
282.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
278.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
277.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
276.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
271.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
262.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
261.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
255.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
255.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
255.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
254.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
253.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
252.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
252.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
251.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
242.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
241.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
236.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
236.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
233.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
229.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
226.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
220.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
220.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
217.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
216.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
214.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
213.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
211.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
207.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
207.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
203.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
203.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
201.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
200.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
200.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
199.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
197.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
196.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
192.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
190.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
190.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
190.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
189.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
188.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
187.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
181.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
178.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
175.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
175.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
174.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
168.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
168.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
167.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
166.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
166.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
165.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
165.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
161.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
159.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
156.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
153.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
152.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
149.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
145.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
142.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
141.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
141.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
141.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
139.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
138.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
137.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
136.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
135.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
135.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
133.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
132.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
131.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
130.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
130.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
128.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
127.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
125.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
123.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
121.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
120.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
119.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
119.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
118.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
114.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
113.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
112.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
112.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
109.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
108.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
108.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
103.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
101.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
98.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
96.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
93.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
92.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
90.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
90.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
89.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
86.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
86.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
83.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
81.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
75.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
73.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
69.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
64.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
58.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
53.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
52.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
51.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
50.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
49.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
49.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
48.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
47.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
45.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
45.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
42.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
42.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
41.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
41.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
40.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
38.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
38.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
35.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
34.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
34.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
33.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
30.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
29.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
26.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
23.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
22.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
21.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
20.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
19.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
18.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
18.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
18.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
16.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
16.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
13.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
13.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
12.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
12.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
10.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
10.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
10.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
9.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
9.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
9.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
7.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
7.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
7.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
6.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
5.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
5.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
4.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
3.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
3.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
3.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
2.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
2.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
1.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
1.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
1.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
1.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
1.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
1.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
1.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
1.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
1.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
1.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
1.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
1.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
0.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
0.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
0.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
0.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
0.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
0.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
0.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
0.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
0.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
0.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
0.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
0.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
0.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
0.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
0.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
0.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011410003
Tumor
3.7
CPT0086820003
Tumor
3.3
CPT0020120003
Tumor
3.3
CPT0065430003
Tumor
2.3
CPT0012280003
Tumor
2.3
CPT0078800003
Tumor
2.2
CPT0084590001
Normal
2.2
CPT0001180009
Tumor
2.2
CPT0014160003
Tumor
2.2
CPT0015730003
Tumor
2.1
CPT0017850003
Tumor
2.0
CPT0023350003
Tumor
1.7
CPT0012550003
Tumor
1.7
CPT0075170001
Normal
1.7
CPT0025230003
Tumor
1.4
CPT0007320003
Tumor
1.4
CPT0010110003
Tumor
1.1
CPT0065750003
Tumor
1.0
CPT0001270001
Normal
0.9
CPT0025050003
Tumor
0.9
CPT0064370003
Tumor
0.8
CPT0092190003
Normal
0.8
CPT0001190001
Normal
0.7
CPT0077310003
Tumor
0.6
CPT0086360003
Tumor
0.6
CPT0079380003
Tumor
0.6
CPT0002350011
Tumor
0.5
CPT0092290003
Tumor
0.5
CPT0077320001
Normal
0.5
CPT0024670003
Tumor
0.5
CPT0019130003
Tumor
0.3
CPT0069190001
Normal
0.2
CPT0078510003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0063640001
Normal
0.2
CPT0092160003
Tumor
0.2
CPT0076350001
Normal
0.1
CPT0066480003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0066520001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0012180003
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0087040003
Tumor
-0.3
CPT0015810003
Tumor
-0.3
CPT0088710001
Normal
-0.3
CPT0065820001
Normal
-0.3
CPT0089040001
Normal
-0.3
CPT0009000003
Tumor
-0.4
CPT0079430001
Normal
-0.4
CPT0088630003
Tumor
-0.4
CPT0000890001
Normal
-0.4
CPT0014130001
Normal
-0.5
CPT0069160003
Tumor
-0.5
CPT0065810003
Tumor
-0.5
CPT0017450001
Normal
-0.5
CPT0079410003
Tumor
-0.5
CPT0006900003
Tumor
-0.5
CPT0001350001
Normal
-0.5
CPT0065690003
Tumor
-0.6
CPT0017410003
Tumor
-0.6
CPT0088500001
Normal
-0.6
CPT0092310003
Normal
-0.6
CPT0001510001
Normal
-0.7
CPT0025580004
Tumor
-0.7
CPT0015910003
Tumor
-0.7
CPT0078530001
Normal
-0.7
CPT0063320003
Tumor
-0.7
CPT0018250001
Normal
-0.7
CPT0023360001
Normal
-0.7
CPT0063330001
Normal
-0.7
CPT0025880003
Tumor
-0.8
CPT0082010001
Normal
-0.8
CPT0025060001
Normal
-0.8
CPT0025170003
Tumor
-0.8
CPT0092800003
Normal
-0.8
CPT0014370004
Tumor
-0.8
CPT0081620001
Normal
-0.8
CPT0084560003
Tumor
-0.9
CPT0014450004
Tumor
-0.9
CPT0006730001
Normal
-0.9
CPT0085670003
Tumor
-0.9
CPT0092790003
Tumor
-0.9
CPT0014350001
Normal
-0.9
CPT0089460004
Tumor
-0.9
CPT0081600003
Tumor
-0.9
CPT0088970003
Tumor
-0.9
CPT0078940001
Normal
-0.9
CPT0078930003
Tumor
-0.9
CPT0088640003
Normal
-1.0
CPT0012090003
Normal
-1.0
CPT0001220008
Tumor
-1.0
CPT0012640003
Normal
-1.0
CPT0075720003
Tumor
-1.0
CPT0086830003
Normal
-1.0
CPT0000870016
Tumor
-1.0
CPT0071150004
Tumor
-1.0
CPT0001540009
Tumor
-1.1
CPT0069010001
Normal
-1.1
CPT0006440003
Tumor
-1.1
CPT0025350003
Tumor
-1.1
CPT0092730003
Tumor
-1.1
CPT0012920003
Normal
-1.1
CPT0025610001
Normal
-1.1
CPT0079510001
Normal
-1.1
CPT0092740003
Normal
-1.1
CPT0000640003
Tumor
-1.1
CPT0001230001
Normal
-1.1
CPT0026420001
Normal
-1.1
CPT0079300001
Normal
-1.2
CPT0075130003
Tumor
-1.2
CPT0006950001
Normal
-1.2
CPT0089020003
Tumor
-1.2
CPT0087050003
Normal
-1.2
CPT0013790003
Normal
-1.2
CPT0007470001
Normal
-1.2
CPT0079230003
Tumor
-1.2
CPT0014470001
Normal
-1.2
CPT0025110003
Tumor
-1.3
CPT0088900003
Tumor
-1.3
CPT0089480003
Normal
-1.3
CPT0079000001
Normal
-1.3
CPT0011240003
Tumor
-1.3
CPT0066430001
Normal
-1.3
CPT0076330003
Tumor
-1.3
CPT0001500009
Tumor
-1.3
CPT0086030003
Tumor
-1.3
CPT0000780007
Tumor
-1.3
CPT0025290003
Tumor
-1.4
CPT0088570001
Normal
-1.4
CPT0081990003
Tumor
-1.4
CPT0086870003
Tumor
-1.4
CPT0001550001
Normal
-1.4
CPT0020020001
Normal
-1.5
CPT0065870003
Tumor
-1.5
CPT0086370003
Normal
-1.5
CPT0026410003
Tumor
-1.5
CPT0078670001
Normal
-1.5
CPT0020130001
Normal
-1.5
CPT0010170001
Normal
-1.5
CPT0009020003
Normal
-1.5
CPT0025920001
Normal
-1.5
CPT0012570003
Normal
-1.6
CPT0002270011
Tumor
-1.6
CPT0086890003
Normal
-1.6
CPT0019160001
Normal
-1.6
CPT0000790001
Normal
-1.6
CPT0002370001
Normal
-1.6
CPT0066470004
Tumor
-1.6
CPT0006630003
Tumor
-1.6
CPT0078990003
Tumor
-1.6
CPT0075560003
Tumor
-1.6
CPT0001260009
Tumor
-1.6
CPT0077140001
Normal
-1.7
CPT0077500001
Normal
-1.7
CPT0081880003
Tumor
-1.7
CPT0065450001
Normal
-1.7
CPT0009080003
Normal
-1.7
CPT0012900004
Tumor
-1.7
CPT0023690003
Tumor
-1.7
CPT0012770003
Normal
-1.8
CPT0012670003
Tumor
-1.8
CPT0079480003
Tumor
-1.9
CPT0088780001
Normal
-1.9
CPT0009060003
Tumor
-1.9
CPT0007860003
Tumor
-1.9
CPT0077110003
Tumor
-1.9
CPT0079180003
Tumor
-2.0
CPT0063630003
Tumor
-2.0
CPT0012080003
Tumor
-2.0
CPT0086970003
Normal
-2.0
CPT0007870001
Normal
-2.1
CPT0086950003
Tumor
-2.1
CPT0064400001
Normal
-2.1
CPT0088920001
Normal
-2.2
CPT0012370003
Tumor
-2.3
CPT0001340003
Tumor
-2.3
CPT0023710001
Normal
-2.4
CPT0078660003
Tumor
-2.4
CPT0078840001
Normal
-2.6
CPT0088760003
Tumor
-2.7
CPT0077490003
Tumor
-3.0
CPT0088550004
Tumor
-3.0
CPT0010160003
Tumor
-3.1
CPT0088690003
Tumor
-3.1
CPT0078830003
Tumor
-3.2
CPT0079270003
Tumor
-3.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
