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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BRAF is not prognostic in Colon Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
3.8
Number of samples
254
Samples
Sample
Description
TPM
TCGA-A6-5656-01A
0 years, male, white, stage:Stage I, alive, 1001 days
13.3
TCGA-A6-2674-01A
0 years, male, white, stage:Stage IV, alive, 1331 days
9.4
TCGA-A6-6781-01A
0 years, male, white, stage:Stage IIIC, alive, 598 days
8.9
TCGA-A6-6780-01A
0 years, male, white, stage:Stage IIA, alive, 612 days
8.2
TCGA-CM-6170-01A
0 years, female, white, stage:Stage I, alive, 457 days
7.8
TCGA-CM-6161-01A
0 years, female, white, stage:Stage I, alive, 457 days
7.0
TCGA-NH-A6GA-01A
0 years, male, black or african american, stage:Stage IIIC, dead, 302 days
7.0
TCGA-WS-AB45-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2130 days
7.0
TCGA-QG-A5Z1-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 256 days
6.5
TCGA-CM-6171-01A
0 years, female, white, stage:Stage I, alive, 427 days
6.5
TCGA-G4-6317-01A
0 years, female, white, stage:Stage IIIC, alive, 1095 days
6.4
TCGA-AZ-6607-01A
0 years, male, white, stage:Stage IV, dead, 97 days
6.4
TCGA-D5-6533-01A
0 years, female, white, stage:'--, alive, 775 days
6.4
TCGA-D5-6538-01A
0 years, female, white, stage:Stage IIIB, alive, 521 days
6.2
TCGA-G4-6310-01A
0 years, male, white, stage:Stage IIIB, alive, 1935 days
6.0
TCGA-AD-A5EK-01A
0 years, male, black or african american, stage:Stage I, alive, 500 days
6.0
TCGA-AM-5820-01A
0 years, female, white, stage:Stage IVA, alive, 14 days
5.9
TCGA-DM-A288-01A
0 years, male, white, stage:Stage IIIC, dead, 427 days
5.8
TCGA-CK-5912-01A
0 years, male, white, stage:Stage I, dead, 1493 days
5.8
TCGA-CM-6172-01A
0 years, female, white, stage:Stage IIIB, alive, 335 days
5.8
TCGA-D5-6922-01A
0 years, male, white, stage:Stage IIIA, alive, 308 days
5.7
TCGA-A6-6650-01A
0 years, female, black or african american, stage:Stage IIA, alive, 627 days
5.7
TCGA-DM-A285-01A
0 years, female, white, stage:Stage IV, dead, 179 days
5.7
TCGA-NH-A8F7-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
5.7
TCGA-CM-6167-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 456 days
5.6
TCGA-CM-6163-01A
0 years, male, white, stage:Stage I, alive, 427 days
5.6
TCGA-CM-6169-01A
0 years, male, black or african american, stage:Stage IIA, alive, 396 days
5.6
TCGA-A6-3810-01A
0 years, male, white, stage:Stage IIA, alive, 1111 days
5.6
TCGA-G4-6315-01A
0 years, male, white, stage:Stage IV, alive, 1883 days
5.5
TCGA-A6-3809-01A
0 years, female, white, stage:Stage IIB, alive, 996 days
5.5
TCGA-F4-6459-01A
0 years, female, white, stage:Stage IIIB, dead, 262 days
5.5
TCGA-F4-6704-01A
0 years, male, american indian or alaska native, stage:Stage IIIC, alive, 47 days
5.4
TCGA-CM-6165-01A
0 years, male, white, stage:Stage IIA, alive, 488 days
5.4
TCGA-DM-A1DB-01A
0 years, male, white, stage:Stage IIA, dead, 1348 days
5.4
TCGA-A6-6648-01A
0 years, male, white, stage:Stage IVA, alive, 766 days
5.4
TCGA-D5-6535-01A
0 years, female, white, stage:Stage IIIB, alive, 460 days
5.2
TCGA-A6-6140-01A
0 years, male, white, stage:Stage IIA, alive, 734 days
5.2
TCGA-CM-4751-01A
0 years, male, white, stage:Stage IIIB, alive, 822 days
5.1
TCGA-CM-6675-01A
0 years, male, black or african american, stage:Stage IVB, alive, 397 days
5.1
TCGA-CM-6168-01A
0 years, female, black or african american, stage:Stage IIA, alive, 395 days
5.1
TCGA-5M-AATE-01A
0 years, male, black or african american, stage:Stage IIA, alive, 1200 days
5.1
TCGA-A6-6652-01A
0 years, male, black or african american, stage:Stage IVA, alive, 751 days
5.0
TCGA-3L-AA1B-01A
0 years, female, black or african american, stage:Stage I, alive, 475 days
5.0
TCGA-AA-A02K-01A
0 years, male, stage:Stage IV, dead, 426 days
4.9
TCGA-G4-6320-01A
0 years, male, white, stage:Stage III, alive, 804 days
4.9
TCGA-A6-6138-01A
0 years, male, white, stage:Stage I, alive, 685 days
4.8
TCGA-CM-6680-01A
0 years, female, white, stage:Stage IIIB, alive, 366 days
4.8
TCGA-A6-6649-01A
0 years, male, white, stage:Stage IIIB, alive, 735 days
4.8
TCGA-D5-6924-01A
0 years, male, white, stage:Stage IIA, alive, 435 days
4.7
TCGA-A6-A566-01A
0 years, female, black or african american, stage:Stage IIIB, dead, 758 days
4.7
TCGA-A6-A565-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 494 days
4.7
TCGA-AA-3655-01A
0 years, male, stage:Stage II, alive, 1856 days
4.7
TCGA-G4-6303-01A
0 years, female, white, stage:Stage IV, dead, 2003 days
4.7
TCGA-CM-6679-01A
0 years, male, white, stage:Stage IIA, alive, 306 days
4.7
TCGA-SS-A7HO-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1829 days
4.7
TCGA-AA-3713-01A
0 years, male, stage:Stage IV, alive, 579 days
4.7
TCGA-F4-6461-01A
0 years, female, white, stage:Stage IIIC, dead, 338 days
4.7
TCGA-A6-5666-01A
0 years, male, white, stage:Stage IIC, alive, 995 days
4.6
TCGA-CA-6719-01A
0 years, male, asian, stage:Stage IIA, alive, 435 days
4.6
TCGA-CM-6676-01A
0 years, male, white, stage:Stage I, alive, 337 days
4.6
TCGA-G4-6626-01A
0 years, male, white, stage:Stage IIA, dead, 1 days
4.6
TCGA-CM-6164-01A
0 years, female, white, stage:Stage IIA, alive, 883 days
4.6
TCGA-A6-5659-01A
0 years, male, white, stage:Stage I, alive, 926 days
4.6
TCGA-DM-A1HA-01A
0 years, male, white, stage:Stage IIIC, alive, 2600 days
4.6
TCGA-AA-3496-01A
0 years, female, stage:Stage II, alive, 31 days
4.5
TCGA-5M-AAT4-01A
0 years, male, black or african american, stage:Stage IV, dead, 49 days
4.4
TCGA-F4-6854-01A
0 years, female, white, stage:Stage IIA, alive, 16 days
4.4
TCGA-AA-3489-01A
0 years, male, stage:Stage II, dead, 214 days
4.4
TCGA-A6-5667-01A
0 years, female, white, stage:Stage IIIB, alive, 887 days
4.4
TCGA-CK-5914-01A
0 years, male, white, stage:Stage IIIB, alive, 669 days
4.4
TCGA-AY-A69D-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
4.4
TCGA-D5-6923-01A
0 years, male, white, stage:Stage I, alive, 378 days
4.3
TCGA-AY-6196-01A
0 years, male, white, stage:Stage IIIC, alive, 6 days
4.3
TCGA-QG-A5Z2-01A
0 years, male, black or african american, stage:Stage I, alive, 952 days
4.3
TCGA-F4-6460-01A
0 years, female, white, stage:Stage IIIB, dead, 972 days
4.3
TCGA-G4-6314-01A
0 years, female, white, stage:Stage IV, alive, 1093 days
4.3
TCGA-DM-A1D6-01A
0 years, male, white, stage:Stage IIA, dead, 570 days
4.3
TCGA-D5-6898-01A
0 years, female, white, stage:Stage I, alive, 229 days
4.3
TCGA-G4-6293-01A
0 years, female, white, stage:Stage III, alive, 4051 days
4.3
TCGA-G4-6625-01A
0 years, female, white, stage:Stage IIA, alive, 2792 days
4.2
TCGA-F4-6855-01A
0 years, female, white, stage:Stage IIA, alive, 1442 days
4.2
TCGA-5M-AAT6-01A
0 years, female, black or african american, stage:Stage IV, dead, 290 days
4.2
TCGA-AZ-4323-01A
0 years, male, white, stage:Stage IV, dead, 43 days
4.2
TCGA-D5-6534-01A
0 years, female, white, stage:Stage IIA, alive, 1316 days
4.2
TCGA-A6-2686-01A
0 years, female, white, stage:Stage IIA, dead, 1126 days
4.2
TCGA-A6-A567-01A
0 years, male, black or african american, stage:Stage IV, dead, 1881 days
4.1
TCGA-CM-5348-01A
0 years, male, white, stage:Stage IIIB, alive, 699 days
4.1
TCGA-A6-A56B-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 1711 days
4.1
TCGA-T9-A92H-01A
0 years, male, black or african american, stage:Stage IIA, alive, 362 days
4.1
TCGA-D5-7000-01A
0 years, female, white, stage:Stage I, alive, 312 days
4.0
TCGA-A6-6654-01A
0 years, female, white, stage:Stage IIIB, alive, 726 days
4.0
TCGA-AD-6890-01A
0 years, male, white, stage:'--, alive, 746 days
4.0
TCGA-NH-A6GC-01A
0 years, female, black or african american, stage:Stage IVB, alive, 389 days
4.0
TCGA-AD-6888-01A
0 years, male, white, stage:Stage IIIB, dead, 472 days
4.0
TCGA-A6-5664-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 672 days
4.0
TCGA-G4-6627-01A
0 years, male, white, stage:Stage IIA, alive, 2175 days
4.0
TCGA-A6-5662-01A
0 years, male, white, stage:Stage IVA, alive, 718 days
4.0
TCGA-D5-6537-01A
0 years, male, white, stage:Stage IIIB, dead, 146 days
4.0
TCGA-CA-6717-01A
0 years, male, asian, stage:Stage IIA, alive, 388 days
4.0
TCGA-CK-5916-01A
0 years, female, white, stage:Stage I, dead, 643 days
4.0
TCGA-AZ-6603-01A
0 years, female, white, stage:'--, dead, 899 days
4.0
TCGA-AY-6197-01A
0 years, male, white, stage:Stage IIA, alive, 652 days
3.9
TCGA-A6-5657-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 962 days
3.9
TCGA-A6-2675-01A
0 years, male, white, stage:Stage IIA, alive, 1321 days
3.9
TCGA-D5-6931-01A
0 years, male, white, stage:Stage IIIC, alive, 365 days
3.9
TCGA-CK-6748-01A
0 years, female, white, stage:Stage IV, alive, 61 days
3.9
TCGA-G4-6311-01A
0 years, male, white, stage:Stage III, alive, 1199 days
3.9
TCGA-AD-6963-01A
0 years, male, white, stage:'--, alive, 834 days
3.9
TCGA-AA-3662-01A
0 years, female, stage:Stage IV, alive, 184 days
3.9
TCGA-CM-6162-01A
0 years, female, white, stage:Stage IIIB, alive, 365 days
3.9
TCGA-DM-A28E-01A
0 years, female, white, stage:Stage IIA, alive, 3648 days
3.8
TCGA-A6-5661-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1020 days
3.8
TCGA-A6-6651-01A
0 years, female, white, stage:Stage IIIB, alive, 662 days
3.8
TCGA-A6-6137-01A
0 years, male, white, stage:Stage IIIB, alive, 824 days
3.8
TCGA-CA-6718-01A
0 years, male, asian, stage:Stage IIA, dead, 306 days
3.8
TCGA-AY-6386-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 542 days
3.8
TCGA-DM-A1D8-01A
0 years, female, white, stage:'--, dead, 383 days
3.8
TCGA-QG-A5YX-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1003 days
3.7
TCGA-CA-6716-01A
0 years, male, asian, stage:Stage IIA, alive, 371 days
3.7
TCGA-F4-6807-01A
0 years, female, white, stage:Stage IIIC, alive, 1309 days
3.6
TCGA-DM-A28A-01A
0 years, male, white, stage:Stage IIIC, dead, 805 days
3.6
TCGA-G4-6297-01A
0 years, female, white, stage:Stage IV, alive, 2506 days
3.6
TCGA-AA-3697-01A
0 years, male, stage:Stage II, alive, 2587 days
3.6
TCGA-NH-A50V-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 588 days
3.6
TCGA-CA-6715-01A
0 years, male, asian, stage:Stage IIIB, alive, 383 days
3.6
TCGA-AZ-6601-01A
0 years, male, white, stage:Stage II, dead, 3042 days
3.6
TCGA-G4-6295-01A
0 years, female, white, stage:Stage II, alive, 254 days
3.5
TCGA-G4-6323-01A
0 years, male, black or african american, stage:Stage IA, alive, 419 days
3.5
TCGA-CM-6677-01A
0 years, female, white, stage:Stage IIA, alive, 337 days
3.5
TCGA-F4-6806-01A
0 years, female, white, stage:Stage I, alive, 1260 days
3.5
TCGA-AD-6899-01A
0 years, male, white, stage:Stage IIIC, dead, 176 days
3.5
TCGA-D5-6539-01A
0 years, female, white, stage:'--, alive, 380 days
3.5
TCGA-F4-6808-01A
0 years, female, white, stage:Stage I, alive, 1024 days
3.5
TCGA-DM-A28H-01A
0 years, male, white, stage:Stage IIIC, alive, 3561 days
3.5
TCGA-QL-A97D-01A
0 years, female, black or african american, stage:Stage I, alive, 666 days
3.4
TCGA-CM-5868-01A
0 years, female, white, stage:Stage IVA, alive, 518 days
3.4
TCGA-DM-A280-01A
0 years, female, white, stage:Stage IIA, dead, 236 days
3.4
TCGA-F4-6570-01A
0 years, female, white, stage:Stage IIA, dead, 188 days
3.4
TCGA-G4-6322-01A
0 years, male, white, stage:Stage IIIB, alive, 792 days
3.4
TCGA-DM-A1D7-01A
0 years, male, white, stage:Stage IIA, dead, 405 days
3.4
TCGA-NH-A50U-01A
0 years, male, black or african american, stage:Stage IVA, dead, 334 days
3.4
TCGA-DM-A1D4-01A
0 years, male, white, stage:Stage IIA, dead, 2821 days
3.3
TCGA-AY-A54L-01A
0 years, female, black or african american, stage:Stage I, alive, 525 days
3.3
TCGA-AY-A8YK-01A
0 years, male, black or african american, stage:Stage IVA, alive, 573 days
3.3
TCGA-A6-4105-01A
0 years, male, white, stage:Stage IIA, dead, 442 days
3.3
TCGA-DM-A0XF-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
3.3
TCGA-QG-A5YV-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1301 days
3.3
TCGA-AY-A71X-01A
0 years, female, black or african american, stage:Stage I, alive, 588 days
3.3
TCGA-D5-6530-01A
0 years, male, white, stage:Stage I, alive, 621 days
3.3
TCGA-F4-6569-01A
0 years, male, white, stage:Stage I, alive, 1087 days
3.3
TCGA-DM-A1DA-01A
0 years, female, white, stage:Stage IIIC, dead, 228 days
3.3
TCGA-AD-6965-01A
0 years, male, white, stage:Stage IIIC, alive, 805 days
3.3
TCGA-F4-6463-01A
0 years, male, white, stage:Stage IIA, alive, 1087 days
3.3
TCGA-CA-5255-01A
0 years, male, asian, stage:Stage IIA, alive, 376 days
3.3
TCGA-DM-A1D9-01A
0 years, female, white, stage:Stage IIA, alive, 4270 days
3.3
TCGA-F4-6703-01A
0 years, male, white, stage:Stage IIA, alive, 1456 days
3.2
TCGA-CM-5862-01A
0 years, male, white, stage:Stage IVA, dead, 153 days
3.2
TCGA-G4-6299-01A
0 years, male, white, stage:Stage IIIC, alive, 2268 days
3.2
TCGA-F4-6805-01A
0 years, female, white, stage:Stage IIA, alive, 1047 days
3.2
TCGA-AA-3511-01A
0 years, male, stage:Stage II, alive, 212 days
3.2
TCGA-AA-3660-01A
0 years, female, stage:Stage II, alive, 2375 days
3.2
TCGA-AU-6004-01A
0 years, female, white, stage:Stage I, alive, 824 days
3.2
TCGA-A6-5665-01A
0 years, female, white, stage:Stage IIA, alive, 671 days
3.2
TCGA-D5-6540-01A
0 years, male, white, stage:Stage I, alive, 491 days
3.2
TCGA-G4-6294-01A
0 years, male, white, stage:Stage IV, dead, 858 days
3.2
TCGA-NH-A50T-01A
0 years, female, black or african american, stage:Stage IIA, alive, 553 days
3.2
TCGA-CK-5913-01A
0 years, female, white, stage:Stage IIA, alive, 1561 days
3.2
TCGA-AZ-6598-01A
0 years, female, white, stage:Stage II, dead, 1503 days
3.2
TCGA-CM-5349-01A
0 years, female, white, stage:Stage IIA, alive, 915 days
3.2
TCGA-CA-5797-01A
0 years, male, asian, stage:Stage IIA, alive, 383 days
3.2
TCGA-CM-5864-01A
0 years, male, white, stage:Stage I, alive, 457 days
3.2
TCGA-NH-A8F8-01A
0 years, male, black or african american, stage:Stage IV, dead, 511 days
3.2
TCGA-CM-5863-01A
0 years, female, white, stage:Stage IIIB, alive, 457 days
3.1
TCGA-D5-6928-01A
0 years, male, white, stage:Stage IIA, alive, 354 days
3.1
TCGA-D5-6920-01A
0 years, female, white, stage:Stage IIA, alive, 377 days
3.1
TCGA-4T-AA8H-01A
0 years, female, black or african american, stage:Stage IIA, alive, 385 days
3.1
TCGA-RU-A8FL-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 1177 days
3.1
TCGA-AZ-5407-01A
0 years, female, white, stage:Stage I, alive, 2683 days
3.1
TCGA-G4-6628-01A
0 years, male, white, stage:Stage I, alive, 2424 days
3.1
TCGA-DM-A28G-01A
0 years, male, white, stage:Stage IIA, dead, 1849 days
3.1
TCGA-AZ-5403-01A
0 years, male, white, stage:Stage II, dead, 1910 days
3.1
TCGA-D5-6531-01A
0 years, male, white, stage:Stage IIA, alive, 540 days
3.1
TCGA-D5-6532-01A
0 years, male, white, stage:Stage IIA, alive, 555 days
3.1
TCGA-DM-A28F-01A
0 years, male, white, stage:Stage IIIB, dead, 1094 days
3.0
TCGA-AD-6548-01A
0 years, female, white, stage:Stage I, alive, 650 days
3.0
TCGA-A6-5660-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 888 days
3.0
TCGA-D5-5538-01A
0 years, female, white, stage:Stage IIIB, dead, 1661 days
3.0
TCGA-DM-A1D0-01A
0 years, female, white, stage:Stage IIA, alive, 3974 days
3.0
TCGA-AD-6901-01A
0 years, male, white, stage:'--, dead, 682 days
3.0
TCGA-D5-5539-01A
0 years, male, white, stage:Stage IIIA, alive, 596 days
3.0
TCGA-A6-6782-01A
0 years, male, white, stage:Stage IIB, alive, 617 days
3.0
TCGA-F4-6809-01A
0 years, female, white, stage:Stage IVA, dead, 403 days
3.0
TCGA-A6-6142-01A
0 years, female, white, stage:Stage IVA, alive, 763 days
3.0
TCGA-CA-5254-01A
0 years, female, asian, stage:Stage IIA, alive, 386 days
2.9
TCGA-DM-A28M-01A
0 years, male, white, stage:Stage IIA, alive, 2895 days
2.9
TCGA-A6-A5ZU-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 293 days
2.9
TCGA-AZ-6599-01A
0 years, male, white, stage:Stage I, dead, 206 days
2.9
TCGA-CM-5861-01A
0 years, female, white, stage:Stage IIA, alive, 457 days
2.9
TCGA-DM-A1HB-01A
0 years, male, white, stage:Stage IIIB, alive, 4126 days
2.9
TCGA-CK-4952-01A
0 years, female, white, stage:Stage IIIC, alive, 475 days
2.9
TCGA-D5-6926-01A
0 years, male, white, stage:Stage IIIB, alive, 275 days
2.9
TCGA-NH-A6GB-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 476 days
2.9
TCGA-AZ-6600-01A
0 years, male, black or african american, stage:Stage IV, dead, 368 days
2.9
TCGA-D5-6927-01A
0 years, male, white, stage:Stage IIA, alive, 287 days
2.9
TCGA-CM-6674-01A
0 years, male, white, stage:Stage IIA, alive, 394 days
2.8
TCGA-AZ-6605-01A
0 years, male, white, stage:Stage IIIB, dead, 159 days
2.8
TCGA-AA-3663-01A
0 years, male, stage:Stage II, alive, 212 days
2.8
TCGA-4N-A93T-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 146 days
2.8
TCGA-G4-6309-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2600 days
2.8
TCGA-CM-5860-01A
0 years, male, white, stage:Stage IIA, alive, 974 days
2.7
TCGA-G4-6306-01A
0 years, male, white, stage:'--, alive, 1359 days
2.7
TCGA-AD-6964-01A
0 years, male, white, stage:'--, dead, 331 days
2.7
TCGA-CK-6747-01A
0 years, female, white, stage:Stage IIA, alive, 820 days
2.7
TCGA-D5-5537-01A
0 years, male, white, stage:'--, dead, 1381 days
2.6
TCGA-DM-A28C-01A
0 years, male, white, stage:Stage IIA, dead, 2475 days
2.6
TCGA-AA-3526-01A
0 years, male, stage:Stage I, alive, 580 days
2.6
TCGA-G4-6304-01A
0 years, female, white, stage:Stage IIB, alive, 1631 days
2.6
TCGA-D5-6529-01A
0 years, male, white, stage:Stage IIA, alive, 614 days
2.6
TCGA-AY-5543-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1004 days
2.6
TCGA-G4-6588-01A
0 years, female, white, stage:Stage IIA, alive, 796 days
2.5
TCGA-CM-5344-01A
0 years, female, white, stage:Stage IIIB, alive, 670 days
2.5
TCGA-F4-6856-01A
0 years, male, white, stage:Stage I, alive, 1074 days
2.5
TCGA-G4-6586-01A
0 years, female, white, stage:Stage IIA, alive, 1089 days
2.5
TCGA-CM-6166-01A
0 years, female, white, stage:Stage I, alive, 669 days
2.5
TCGA-AZ-6606-01A
0 years, male, white, stage:Stage IV, dead, 357 days
2.5
TCGA-AA-A02Y-01A
0 years, male, stage:Stage I, alive, 1216 days
2.5
TCGA-A6-6141-01A
0 years, male, black or african american, stage:Stage IIA, alive, 255 days
2.4
TCGA-DM-A28K-01A
0 years, male, white, stage:Stage IIA, alive, 2988 days
2.4
TCGA-QG-A5YW-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 896 days
2.4
TCGA-AD-6895-01A
0 years, male, white, stage:Stage IIIB, alive, 763 days
2.4
TCGA-D5-6536-01A
0 years, male, white, stage:Stage IIA, alive, 543 days
2.4
TCGA-CM-6678-01A
0 years, female, white, stage:Stage IVA, alive, 335 days
2.3
TCGA-CK-6751-01A
0 years, female, white, stage:Stage I, alive, 518 days
2.3
TCGA-D5-6932-01A
0 years, male, white, stage:Stage IIA, alive, 346 days
2.3
TCGA-G4-6307-01A
0 years, female, white, stage:Stage IIIB, alive, 1674 days
2.3
TCGA-A6-6653-01A
0 years, male, white, stage:Stage I, alive, 742 days
2.3
TCGA-AZ-4616-01A
0 years, female, white, stage:Stage IV, dead, 156 days
2.3
TCGA-CK-4950-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2599 days
2.2
TCGA-DM-A282-01A
0 years, female, white, stage:Stage IIA, alive, 4233 days
2.2
TCGA-AD-5900-01A
0 years, male, white, stage:Stage I, alive, 370 days
2.2
TCGA-AM-5821-01A
0 years, female, white, stage:Stage IIA, alive, 28 days
2.2
TCGA-AU-3779-01A
0 years, female, white, stage:Stage IIA, alive, 441 days
2.2
TCGA-DM-A0X9-01A
0 years, female, white, stage:Stage IIA, alive, 3641 days
2.2
TCGA-AZ-6608-01A
0 years, female, white, stage:Stage IIIA, dead, 59 days
2.2
TCGA-AD-6889-01A
0 years, male, asian, stage:Stage IIA, dead, 2532 days
2.1
TCGA-G4-6321-01A
0 years, female, white, stage:Stage III, alive, 672 days
2.0
TCGA-D5-6541-01A
0 years, male, white, stage:Stage IIA, alive, 474 days
2.0
TCGA-D5-6929-01A
0 years, female, white, stage:Stage IV, alive, 408 days
2.0
TCGA-AA-3685-01A
0 years, male, stage:Stage II, alive, 1127 days
1.8
TCGA-CM-4743-01A
0 years, male, white, stage:Stage IIA, alive, 701 days
1.8
TCGA-CM-4744-01A
0 years, male, white, stage:Stage I, alive, 609 days
1.7
TCGA-DM-A0XD-01A
0 years, male, white, stage:Stage IIA, dead, 743 days
1.6
TCGA-D5-6930-01A
0 years, male, white, stage:Stage IIA, alive, 406 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BRAF is not prognostic in Colon Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.7
Number of samples
486
Samples
Sample
Description
TPM
U0420
0 years, male, NA, stage:T4N1M1, alive, 417 days
31.0
U0937
0 years, male, NA, stage:T2N0M0, dead, 1558 days
20.8
U3024
0 years, female, NA, stage:T3N0M0, alive, 463 days
19.2
U3032
0 years, female, NA, stage:T3N1M0, alive, 449 days
18.2
U1253
0 years, female, NA, stage:T3N0M0, dead, 165 days
18.0
U0340
0 years, female, NA, stage:T4N2M1, dead, 438 days
17.8
U2964
0 years, male, NA, stage:T3N1M0, alive, 637 days
17.5
U0087
0 years, female, NA, stage:T3N2M0, dead, 337 days
17.3
U3034
0 years, female, NA, stage:T3N1M0, alive, 443 days
17.3
U0203
0 years, male, NA, stage:T3N0M0, dead, 827 days
17.3
U0267
0 years, male, NA, stage:T4N0M0, dead, 445 days
17.0
U0185
0 years, male, NA, stage:T1N0M0, alive, 1248 days
16.7
U1094
0 years, female, NA, stage:T4N1M0, alive, 1267 days
16.1
U2995
0 years, female, NA, stage:T3N1M0, alive, 491 days
16.0
U2947
0 years, female, NA, stage:T3N0M0, alive, 543 days
16.0
U3038
0 years, male, NA, stage:T3N0M0, alive, 328 days
15.9
U0984
0 years, female, NA, stage:T4N0M0, alive, 1287 days
15.8
U0161
0 years, male, NA, stage:T4N2M1, alive, 42 days
15.8
U1022
0 years, male, NA, stage:T4N2M0, dead, 61 days
15.8
U0257
0 years, male, NA, stage:T3N1M0, dead, 2508 days
15.8
U0144
0 years, male, NA, stage:T3N0M0, alive, 1218 days
15.7
U0363
0 years, male, NA, stage:T3N1M0, alive, 3601 days
15.6
U0348
0 years, female, NA, stage:T3N0M0, alive, 533 days
15.3
U1301
0 years, female, NA, stage:T4N2M0, dead, 877 days
15.2
U1447
0 years, male, NA, stage:T4N1M0, alive, 988 days
15.2
U0148
0 years, male, NA, stage:T3N0M0, alive, 1780 days
15.1
U0095
0 years, male, NA, stage:T4N1M0, dead, 1034 days
15.1
U0414
0 years, male, NA, stage:T3N0M0, alive, 1691 days
15.1
U3037
0 years, male, NA, stage:T3N1M0, alive, 405 days
14.9
U3039
0 years, male, NA, stage:T4N1M1, dead, 366 days
14.8
U2953
0 years, female, NA, stage:T4aN0M0, alive, 541 days
14.8
U2999
0 years, female, NA, stage:T2N0M0, alive, 581 days
14.8
U0225
0 years, male, NA, stage:T3N1M0, alive, 581 days
14.8
U0180
0 years, male, NA, stage:T3N0M1, dead, 965 days
14.7
U0416
0 years, male, NA, stage:T1N1M0, alive, 1228 days
14.6
U0124
0 years, female, NA, stage:T1N0M0, alive, 2430 days
14.6
U0313
0 years, male, NA, stage:T4N1M0, dead, 1142 days
14.6
U0131
0 years, female, NA, stage:T4N2M1, alive, 238 days
14.6
U0972
0 years, female, NA, stage:T1N0M0, alive, 2473 days
14.4
U0463
0 years, male, NA, stage:T3N0M0, alive, 946 days
14.3
U0068
0 years, female, NA, stage:T3N1M0, alive, 1991 days
14.3
U1040
0 years, male, NA, stage:T2N0M0, alive, 1029 days
14.3
U0263
0 years, female, NA, stage:T3N0M1, alive, 362 days
14.3
U1208
0 years, female, NA, stage:T1N0M0, alive, 834 days
14.3
U0976
0 years, female, NA, stage:T3N2M0, dead, 97 days
14.2
U0171
0 years, female, NA, stage:T3N1M0, dead, 1920 days
14.2
U1095
0 years, female, NA, stage:T3N1M1, alive, 2425 days
14.2
U0447
0 years, male, NA, stage:T4N1M0, dead, 1819 days
14.2
U0441
0 years, female, NA, stage:T2N1M0, alive, 2738 days
14.1
U0312
0 years, female, NA, stage:T4N2M1, alive, 499 days
14.1
U0352
0 years, female, NA, stage:T4N2M0, dead, 385 days
14.1
U0389
0 years, female, NA, stage:T3N1M0, dead, 927 days
14.1
U0472
0 years, male, NA, stage:TXN2M0, alive, 542 days
14.0
U0929
0 years, male, NA, stage:T4N1M0, alive, 436 days
14.0
U2979
0 years, male, NA, stage:T3N2M0, alive, 616 days
13.9
U3048
0 years, male, NA, stage:T4N2M0, alive, 535 days
13.9
U0967
0 years, male, NA, stage:T2N0M0, dead, 1691 days
13.9
U0411
0 years, female, NA, stage:T3N1M0, alive, 1868 days
13.8
U0245
0 years, female, NA, stage:T3N1M0, dead, 564 days
13.8
U0106
0 years, female, NA, stage:T3N1M0, dead, 653 days
13.7
U0309
0 years, female, NA, stage:T3N0M0, dead, 1898 days
13.7
U0302
0 years, male, NA, stage:T1N0M0, alive, 892 days
13.7
U0438
0 years, female, NA, stage:T3N0M0, alive, 2009 days
13.7
U0285
0 years, female, NA, stage:T3N0M0, alive, 2165 days
13.7
U1155
0 years, male, NA, stage:T4N1M0, alive, 1815 days
13.7
U0210
0 years, male, NA, stage:T3N0M0, dead, 1800 days
13.6
U3008
0 years, female, NA, stage:T2N0M0, alive, 473 days
13.5
U0387
0 years, male, NA, stage:T2N0M0, alive, 1327 days
13.4
U0247
0 years, female, NA, stage:T3N1M0, alive, 2538 days
13.4
U0288
0 years, male, NA, stage:T1N0M0, alive, 1513 days
13.4
U1130
0 years, male, NA, stage:T2N1M0, alive, 913 days
13.4
U1321
0 years, male, NA, stage:T3N1M0, alive, 2578 days
13.4
U0177
0 years, female, NA, stage:T3N0M0, alive, 355 days
13.3
U1127
0 years, female, NA, stage:T3N0M0, alive, 3465 days
13.3
U0394
0 years, male, NA, stage:T2N1M0, alive, 969 days
13.2
U0316
0 years, male, NA, stage:T3N2M0, alive, 2012 days
13.2
U0240
0 years, female, NA, stage:T3N1M0, dead, 800 days
13.2
U2928
0 years, male, NA, stage:T2N0M0, alive, 563 days
13.2
U0181
0 years, female, NA, stage:T1N0M0, alive, 3623 days
13.2
U0123
0 years, male, NA, stage:T3N0M0, dead, 1880 days
13.1
U2882
0 years, female, NA, stage:T3N1M0, alive, 637 days
13.1
U2927
0 years, male, NA, stage:T3N1M0, alive, 564 days
13.1
U1401
0 years, female, NA, stage:T3N0M0, alive, 1482 days
13.1
U0094
0 years, female, NA, stage:T3N2M0, alive, 741 days
13.1
U0408
0 years, female, NA, stage:T4N0M0, dead, 2100 days
13.0
U1049
0 years, female, NA, stage:T3N1M0, alive, 1200 days
13.0
U0135
0 years, female, NA, stage:T3N0M0, alive, 1738 days
12.9
U1031
0 years, male, NA, stage:T1N1M0, alive, 1625 days
12.9
U0369
0 years, female, NA, stage:T3N0M0, dead, 1095 days
12.9
U2975
0 years, male, NA, stage:T4N1M0, alive, 514 days
12.9
U0098
0 years, male, NA, stage:T3N0M0, dead, 2473 days
12.9
U1486
0 years, female, NA, stage:T4N0M0, alive, 1606 days
12.8
U0908
0 years, female, NA, stage:T3N0M1, dead, 40 days
12.8
U0392
0 years, male, NA, stage:T3N2M0, alive, 489 days
12.8
U0269
0 years, female, NA, stage:T3N0M0, alive, 2530 days
12.7
U1291
0 years, female, NA, stage:T3N0M0, alive, 2000 days
12.7
U0143
0 years, male, NA, stage:T3N2M0, alive, 2313 days
12.7
U1483
0 years, female, NA, stage:T3N0M0, alive, 1094 days
12.7
U1241
0 years, male, NA, stage:T3N1M0, dead, 49 days
12.7
U1103
0 years, female, NA, stage:T4N2M0, alive, 975 days
12.7
U0358
0 years, female, NA, stage:T4N1M0, alive, 2290 days
12.6
U1160
0 years, male, NA, stage:T3N1M0, alive, 1557 days
12.6
U0882
0 years, male, NA, stage:T3N0M0, alive, 1675 days
12.6
U1352
0 years, male, NA, stage:T3N2M1, dead, 741 days
12.6
U0942
0 years, male, NA, stage:T3N0M0, alive, 665 days
12.5
U0375
0 years, male, NA, stage:T3N0M0, dead, 666 days
12.5
U0152
0 years, male, NA, stage:T3N1M0, alive, 989 days
12.5
U2861
0 years, male, NA, stage:T3N0M0, alive, 652 days
12.5
U2971
0 years, male, NA, stage:T4aN0M0, alive, 629 days
12.5
U0223
0 years, male, NA, stage:T4N1M0, alive, 1812 days
12.4
U1317
0 years, male, NA, stage:T4N1M0, alive, 965 days
12.4
U0589
0 years, female, NA, stage:T3N0M0, alive, 1176 days
12.4
U1045
0 years, female, NA, stage:T4N2M0, alive, 1239 days
12.4
U1212
0 years, female, NA, stage:T2N0M0, alive, 69 days
12.4
U1338
0 years, female, NA, stage:T4N1M0, dead, 716 days
12.3
U0292
0 years, male, NA, stage:T4N1M0, alive, 1666 days
12.3
U1239
0 years, male, NA, stage:T2N0M0, dead, 1998 days
12.3
U2956
0 years, female, NA, stage:T3N0M0, alive, 540 days
12.3
U1018
0 years, male, NA, stage:T4N1M1, dead, 1693 days
12.3
U0199
0 years, female, NA, stage:T4N2M0, alive, 1372 days
12.3
U0462
0 years, female, NA, stage:T4N1M0, alive, 1017 days
12.3
U0122
0 years, female, NA, stage:T2N0M0, dead, 159 days
12.3
U0297
0 years, female, NA, stage:T3N2M0, alive, 1196 days
12.2
U0202
0 years, male, NA, stage:T3N0M0, dead, 2670 days
12.2
U2774
0 years, female, NA, stage:T3N0M0, alive, 783 days
12.2
U0966
0 years, male, NA, stage:T4N0M0, dead, 1513 days
12.2
U0187
0 years, male, NA, stage:T3N2M0, alive, 1632 days
12.2
U0175
0 years, male, NA, stage:T3N2M0, alive, 1875 days
12.2
U0916
0 years, female, NA, stage:T3N0M0, alive, 1578 days
12.2
U0326
0 years, female, NA, stage:T3N0M0, alive, 3178 days
12.2
U0200
0 years, female, NA, stage:T3N0M0, alive, 2614 days
12.2
U1343
0 years, female, NA, stage:T4N2M0, alive, 3178 days
12.2
U0321
0 years, female, NA, stage:T3N0M0, alive, 1029 days
12.1
U0345
0 years, female, NA, stage:T3N0M0, alive, 2127 days
12.1
U0179
0 years, male, NA, stage:T3N1M0, dead, 1043 days
12.1
U1037
0 years, male, NA, stage:T4N0M0, alive, 1658 days
12.1
U2792
0 years, male, NA, stage:T2N1M0, alive, 758 days
12.1
U1448
0 years, male, NA, stage:T3N0M1, dead, 1512 days
12.1
U0178
0 years, female, NA, stage:T3N1M0, dead, 2096 days
12.1
U1274
0 years, male, NA, stage:T2N1M0, alive, 1198 days
12.1
U0347
0 years, female, NA, stage:T4N1M1, alive, 628 days
12.1
U3051
0 years, male, NA, stage:T3N2M0, alive, 415 days
12.1
U0182
0 years, female, NA, stage:T4N1M0, dead, 260 days
12.0
U1366
0 years, male, NA, stage:T3N1M0, alive, 2010 days
12.0
U0332
0 years, female, NA, stage:T3N0M0, alive, 2101 days
12.0
U2842
0 years, female, NA, stage:T4N2M0, alive, 675 days
11.9
U1374
0 years, male, NA, stage:T4N0M0, alive, 827 days
11.9
U1046
0 years, female, NA, stage:T4N2M1, dead, 697 days
11.9
U0141
0 years, male, NA, stage:T3N2M0, alive, 2079 days
11.9
U0465
0 years, male, NA, stage:T3N0M0, alive, 2383 days
11.9
U3029
0 years, male, NA, stage:T2N0M0, alive, 475 days
11.9
U1251
0 years, male, NA, stage:T4N2M0, alive, 126 days
11.9
U0427
0 years, male, NA, stage:T2N0M0, alive, 1193 days
11.9
U1162
0 years, male, NA, stage:T2N1M0, dead, 354 days
11.8
U0108
0 years, female, NA, stage:T3N0M1, alive, 535 days
11.8
U0157
0 years, male, NA, stage:T4N0M0, dead, 131 days
11.8
U0328
0 years, male, NA, stage:T4N0M0, dead, 1362 days
11.8
U0103
0 years, female, NA, stage:T3N1M0, alive, 1197 days
11.8
U0136
0 years, female, NA, stage:T3N0M0, dead, 2795 days
11.8
U0259
0 years, female, NA, stage:T4N2M0, alive, 76 days
11.8
U1303
0 years, male, NA, stage:T4N1M0, alive, 2283 days
11.7
U0451
0 years, female, NA, stage:T4N2M0, alive, 3023 days
11.7
U1474
0 years, female, NA, stage:T1N0MX, alive, 2012 days
11.7
U1060
0 years, male, NA, stage:T3N0M0, alive, 2442 days
11.7
U1104
0 years, female, NA, stage:T4N0M0, alive, 1109 days
11.7
U0176
0 years, male, NA, stage:T3N1M0, alive, 2600 days
11.6
U0063
0 years, male, NA, stage:T1N0M0, dead, 1779 days
11.6
U2942
0 years, male, NA, stage:T2N0M0, alive, 549 days
11.6
U1034
0 years, male, NA, stage:T4N0M0, alive, 1575 days
11.6
U0229
0 years, female, NA, stage:TXN2M1, dead, 2115 days
11.6
U2843
0 years, female, NA, stage:T3N0M0, alive, 674 days
11.6
U2959
0 years, male, NA, stage:T3N2M0, alive, 536 days
11.6
U0295
0 years, male, NA, stage:T3N0M0, dead, 2572 days
11.6
U2754
0 years, male, NA, stage:T4N0M0, alive, 809 days
11.6
U0397
0 years, male, NA, stage:T4N0M0, alive, 1663 days
11.6
U2848
0 years, female, NA, stage:T4N2M0, alive, 669 days
11.6
U0950
0 years, female, NA, stage:T4N1M0, alive, 1834 days
11.5
U0158
0 years, male, NA, stage:T1N0M0, dead, 3101 days
11.5
U1041
0 years, male, NA, stage:T2N0M0, alive, 1108 days
11.5
U0129
0 years, male, NA, stage:T4N0M0, dead, 1265 days
11.5
U0442
0 years, male, NA, stage:T3N0M0, alive, 619 days
11.4
U1075
0 years, female, NA, stage:T3N0M0, alive, 1290 days
11.4
U2753
0 years, female, NA, stage:T2N0M0, alive, 813 days
11.4
U1421
0 years, female, NA, stage:T3N1M0, alive, 1905 days
11.3
U1432
0 years, female, NA, stage:T3N1M0, alive, 577 days
11.3
U0319
0 years, male, NA, stage:T3N0M0, alive, 2801 days
11.3
U0222
0 years, female, NA, stage:T3N2M1, alive, 1779 days
11.3
U0386
0 years, female, NA, stage:T4N1M1, alive, 2592 days
11.3
U1327
0 years, female, NA, stage:T3N0M0, alive, 1613 days
11.2
U3005
0 years, male, NA, stage:T3N0M0, alive, 478 days
11.2
U1107
0 years, male, NA, stage:T3N0M0, alive, 329 days
11.2
U0960
0 years, male, NA, stage:T3N0M0, alive, 1009 days
11.2
U3122
0 years, female, NA, stage:T3N0M1, dead, 91 days
11.2
U0469
0 years, male, NA, stage:T3N0M0, dead, 409 days
11.2
U0338
0 years, female, NA, stage:T3N0M0, alive, 1016 days
11.2
U0384
0 years, male, NA, stage:T2N1M1, alive, 1024 days
11.1
U0002
0 years, female, NA, stage:T3N2M0, alive, 3691 days
11.1
U0474
0 years, male, NA, stage:T3N1M0, alive, 1017 days
11.1
U0306
0 years, male, NA, stage:T3N1M0, dead, 717 days
11.1
U1188
0 years, female, NA, stage:T3N0M0, dead, 967 days
11.1
U2948
0 years, female, NA, stage:T3N1M0, alive, 543 days
11.0
U0102
0 years, female, NA, stage:T4N2M0, dead, 670 days
11.0
U1204
0 years, male, NA, stage:T4N2M0, alive, 2214 days
11.0
U0085
0 years, male, NA, stage:T4N1M0, dead, 1698 days
11.0
U1429
0 years, female, NA, stage:T3N0M0, alive, 1660 days
11.0
U1073
0 years, female, NA, stage:T3N1M0, alive, 1359 days
10.9
U0262
0 years, female, NA, stage:T2N0M0, alive, 2534 days
10.9
U0275
0 years, female, NA, stage:T3N2M0, alive, 549 days
10.9
U1145
0 years, female, NA, stage:T3N0M0, dead, 445 days
10.9
U0464
0 years, male, NA, stage:T3N0M0, alive, 918 days
10.9
U0121
0 years, male, NA, stage:T4N2M0, alive, 655 days
10.9
U0365
0 years, female, NA, stage:T4N1M0, dead, 313 days
10.9
U2958
0 years, female, NA, stage:T1N0M0, alive, 536 days
10.9
U1369
0 years, male, NA, stage:T3N0M0, dead, 1604 days
10.9
U0083
0 years, male, NA, stage:T4N0M0, dead, 731 days
10.9
U1344
0 years, female, NA, stage:T3N1M0, alive, 1450 days
10.8
U0249
0 years, female, NA, stage:T4N2M0, dead, 874 days
10.8
U0471
0 years, female, NA, stage:T3N1M0, alive, 1673 days
10.8
U0398
0 years, female, NA, stage:T3N0M0, alive, 721 days
10.8
U0209
0 years, male, NA, stage:T3N1M0, alive, 2109 days
10.8
U0376
0 years, male, NA, stage:T2N1M0, alive, 965 days
10.8
U0073
0 years, male, NA, stage:T4N0MX, dead, 318 days
10.8
U0385
0 years, male, NA, stage:T3N0M0, alive, 902 days
10.8
U0166
0 years, female, NA, stage:T3N0M0, alive, 763 days
10.8
U2837
0 years, female, NA, stage:T4N1M0, alive, 681 days
10.7
U1396
0 years, female, NA, stage:T4N0M0, alive, 1168 days
10.7
U1111
0 years, female, NA, stage:T3N0M0, dead, 1631 days
10.7
U0934
0 years, female, NA, stage:T3N0M0, alive, 1185 days
10.7
U3025
0 years, male, NA, stage:T4N2M1, alive, 377 days
10.7
U0067
0 years, female, NA, stage:T3N0M0, alive, 2180 days
10.7
U0333
0 years, female, NA, stage:T3N2M0, dead, 1959 days
10.7
U1220
0 years, male, NA, stage:T3N2M0, dead, 1953 days
10.7
U0204
0 years, male, NA, stage:T3N0M0, dead, 770 days
10.7
U1059
0 years, male, NA, stage:T3N1M0, alive, 2790 days
10.7
U0303
0 years, female, NA, stage:T3N0M0, alive, 2847 days
10.7
U1067
0 years, male, NA, stage:T3N0M0, alive, 1570 days
10.6
U0460
0 years, female, NA, stage:T3N0M0, dead, 2069 days
10.6
U3018
0 years, male, NA, stage:T4N1M0, alive, 463 days
10.6
U2896
0 years, female, NA, stage:T3N1M0, alive, 609 days
10.6
U0473
0 years, male, NA, stage:T3N1M0, alive, 786 days
10.6
U3100
0 years, male, NA, stage:T3N1M0, dead, 1608 days
10.6
U0254
0 years, female, NA, stage:T3N1M0, alive, 659 days
10.5
U0370
0 years, female, NA, stage:T3N0M0, alive, 1047 days
10.5
U0445
0 years, female, NA, stage:T3N0M0, alive, 1851 days
10.5
U0119
0 years, female, NA, stage:T3N0M0, alive, 3259 days
10.5
U0104
0 years, female, NA, stage:T4N0M0, dead, 1639 days
10.5
U0362
0 years, male, NA, stage:T3N0M0, alive, 1148 days
10.5
U0196
0 years, male, NA, stage:T3N0M0, alive, 2086 days
10.5
U0066
0 years, male, NA, stage:T3N0M0, dead, 2486 days
10.5
U1074
0 years, male, NA, stage:T3N0M0, dead, 1043 days
10.5
U0105
0 years, female, NA, stage:T2N0M0, dead, 2158 days
10.4
U0467
0 years, female, NA, stage:T3N0M0, alive, 1848 days
10.4
U1250
0 years, male, NA, stage:T2N0M0, alive, 597 days
10.4
U0221
0 years, male, NA, stage:T3N0M0, alive, 569 days
10.3
U1044
0 years, male, NA, stage:T4N0M0, alive, 3146 days
10.3
U0110
0 years, female, NA, stage:T3N1M1, dead, 878 days
10.3
U0342
0 years, male, NA, stage:T4N2M0, alive, 305 days
10.3
U0320
0 years, female, NA, stage:T4N2M1, alive, 188 days
10.3
U0162
0 years, female, NA, stage:T3N0M0, alive, 1488 days
10.3
U0134
0 years, male, NA, stage:T3N0M0, alive, 2009 days
10.3
U0081
0 years, male, NA, stage:T3N2M0, dead, 248 days
10.2
U0146
0 years, female, NA, stage:T3N2M0, dead, 733 days
10.2
U0287
0 years, female, NA, stage:T2N0M0, alive, 1897 days
10.2
U0382
0 years, female, NA, stage:T3N0M0, alive, 2550 days
10.1
U0217
0 years, female, NA, stage:T3N0M0, dead, 538 days
10.1
U0400
0 years, male, NA, stage:T4N0M0, dead, 1073 days
10.1
U2819
0 years, female, NA, stage:T3N0M0, alive, 708 days
10.1
U0236
0 years, male, NA, stage:T3N1M0, alive, 1842 days
10.0
U0403
0 years, male, NA, stage:T3N1M1, dead, 1809 days
10.0
U1349
0 years, female, NA, stage:T3N1M0, alive, 1899 days
10.0
U0987
0 years, female, NA, stage:T3N0M0, alive, 2482 days
10.0
U0273
0 years, male, NA, stage:T2N1M0, alive, 2641 days
10.0
U0590
0 years, female, NA, stage:T3N0M0, alive, 661 days
10.0
U0421
0 years, male, NA, stage:T3N1M0, alive, 674 days
10.0
U2935
0 years, male, NA, stage:T4N1M0, alive, 555 days
10.0
U0991
0 years, male, NA, stage:T4N2M0, dead, 534 days
10.0
U0399
0 years, female, NA, stage:T4N2M0, dead, 547 days
10.0
U0172
0 years, male, NA, stage:T4N0M0, dead, 678 days
10.0
U0214
0 years, male, NA, stage:T4N1M1, alive, 788 days
10.0
U1264
0 years, female, NA, stage:T3N0M0, dead, 1583 days
10.0
U2798
0 years, male, NA, stage:T3N0M0, alive, 751 days
10.0
U0091
0 years, male, NA, stage:T3N0M0, alive, 520 days
9.9
U0413
0 years, male, NA, stage:T2N0M0, alive, 1228 days
9.9
U0367
0 years, female, NA, stage:T3N1M0, alive, 3075 days
9.9
U1071
0 years, female, NA, stage:T4N0M1, alive, 1514 days
9.9
U1017
0 years, male, NA, stage:T3N0M0, alive, 615 days
9.9
U1332
0 years, male, NA, stage:T3N0M0, alive, 1672 days
9.9
U0939
0 years, male, NA, stage:T3N1M0, alive, 2960 days
9.9
U0448
0 years, male, NA, stage:T3N2M0, alive, 3615 days
9.9
U1078
0 years, female, NA, stage:T3N0M0, alive, 1016 days
9.9
U1276
0 years, male, NA, stage:T3N0M0, alive, 2474 days
9.8
U0235
0 years, female, NA, stage:T3N0M0, alive, 1327 days
9.8
U0277
0 years, male, NA, stage:T2N1M0, alive, 270 days
9.8
U0456
0 years, male, NA, stage:T4N0M0, dead, 2222 days
9.8
U0260
0 years, male, NA, stage:T1N0M1, alive, 2928 days
9.8
U0107
0 years, male, NA, stage:T3N0M0, dead, 2354 days
9.8
U0215
0 years, male, NA, stage:T3N0M0, alive, 1269 days
9.8
U1086
0 years, female, NA, stage:T1N0M0, alive, 2907 days
9.8
U3043
0 years, female, NA, stage:T3N2M0, alive, 287 days
9.8
U1122
0 years, female, NA, stage:T3N2M0, alive, 1675 days
9.7
U0383
0 years, male, NA, stage:T3N2M1, dead, 595 days
9.7
U0151
0 years, female, NA, stage:T3N0M0, alive, 2014 days
9.7
U1267
0 years, male, NA, stage:T3N1M0, dead, 2869 days
9.7
U0207
0 years, female, NA, stage:T3N0M0, dead, 2593 days
9.7
U2780
0 years, male, NA, stage:T3N0M0, alive, 778 days
9.7
U0377
0 years, female, NA, stage:T3N2M0, alive, 3720 days
9.7
U0092
0 years, male, NA, stage:T3N0M0, alive, 2779 days
9.6
U1184
0 years, male, NA, stage:T4N1M0, alive, 290 days
9.6
U0082
0 years, female, NA, stage:T3N1M0, dead, 2339 days
9.6
U0069
0 years, female, NA, stage:T4N2M0, dead, 135 days
9.6
U0149
0 years, female, NA, stage:T3N2M0, alive, 1715 days
9.6
U0090
0 years, female, NA, stage:T3N0M0, dead, 1258 days
9.6
U0401
0 years, male, NA, stage:T4N1M0, alive, 1715 days
9.6
U0078
0 years, female, NA, stage:T3N0M0, alive, 1183 days
9.6
U0208
0 years, female, NA, stage:T3N1M0, dead, 1233 days
9.6
U0455
0 years, female, NA, stage:T3N2M0, alive, 2445 days
9.5
U0153
0 years, female, NA, stage:T3N0M0, dead, 1718 days
9.5
U0300
0 years, male, NA, stage:T2N0M0, alive, 974 days
9.5
U0428
0 years, male, NA, stage:T4N1M1, alive, 1016 days
9.5
U0357
0 years, female, NA, stage:T3N0M0, alive, 2285 days
9.5
U0356
0 years, male, NA, stage:T4N1M0, alive, 536 days
9.5
U0100
0 years, female, NA, stage:T3N0M0, dead, 1920 days
9.5
U0424
0 years, male, NA, stage:T3N0M0, alive, 2192 days
9.5
U0335
0 years, female, NA, stage:T3N1M0, alive, 2464 days
9.5
U0252
0 years, male, NA, stage:T3N1M0, dead, 1761 days
9.4
U1446
0 years, female, NA, stage:T3N0M0, alive, 2314 days
9.4
U0183
0 years, male, NA, stage:T3N1M1, dead, 2957 days
9.4
U1252
0 years, female, NA, stage:T4N2M0, alive, 1309 days
9.4
U0381
0 years, male, NA, stage:T3N1M0, dead, 71 days
9.4
U0977
0 years, female, NA, stage:T4N2M0, dead, 140 days
9.4
U0344
0 years, male, NA, stage:T2N1M0, dead, 818 days
9.4
U1183
0 years, male, NA, stage:T4N2M0, alive, 959 days
9.3
U0109
0 years, female, NA, stage:T4N2M1, alive, 144 days
9.3
U3022
0 years, male, NA, stage:T2N0M0, alive, 484 days
9.3
U0117
0 years, female, NA, stage:T2N0M0, dead, 1078 days
9.3
U1150
0 years, female, NA, stage:T3N0M0, alive, 15 days
9.3
U3012
0 years, male, NA, stage:T3N0M0, alive, 472 days
9.3
U0435
0 years, female, NA, stage:T2N0M0, alive, 3616 days
9.3
U0315
0 years, female, NA, stage:T2N0M0, alive, 1973 days
9.3
U1240
0 years, male, NA, stage:T4N0M0, alive, 765 days
9.3
U1386
0 years, male, NA, stage:T3N1M0, alive, 1518 days
9.2
U1292
0 years, female, NA, stage:T4N1M0, alive, 1147 days
9.2
U0278
0 years, female, NA, stage:T2N0M0, alive, 763 days
9.2
U1129
0 years, male, NA, stage:T3N0M0, dead, 118 days
9.2
U0113
0 years, male, NA, stage:T4N2M0, alive, 1102 days
9.2
U0125
0 years, female, NA, stage:T1N0M0, dead, 668 days
9.2
U0993
0 years, male, NA, stage:T4N2M0, alive, 1267 days
9.2
U1304
0 years, female, NA, stage:TXNXM0, alive, 1081 days
9.2
U0289
0 years, female, NA, stage:T3N0M0, alive, 3511 days
9.2
U3030
0 years, female, NA, stage:T3N0M0, alive, 380 days
9.2
U1147
0 years, male, NA, stage:T3N0M0, dead, 282 days
9.1
U0378
0 years, female, NA, stage:T4N1M0, dead, 815 days
9.1
U0165
0 years, female, NA, stage:T2N0M0, alive, 1702 days
9.1
U2981
0 years, male, NA, stage:T3N0M0, alive, 508 days
9.1
U0368
0 years, male, NA, stage:T2N0M0, alive, 801 days
9.1
U0955
0 years, female, NA, stage:T3N0M0, alive, 2170 days
9.1
U0089
0 years, female, NA, stage:T1NXM0, dead, 2365 days
9.1
U0168
0 years, male, NA, stage:T3N0M0, dead, 948 days
9.1
U0233
0 years, female, NA, stage:T3N1M0, alive, 975 days
9.0
U0308
0 years, male, NA, stage:T4N1M0, alive, 1075 days
9.0
U1120
0 years, male, NA, stage:T4N1M1, alive, 823 days
9.0
U1069
0 years, female, NA, stage:T3N0M0, dead, 2187 days
9.0
U0439
0 years, male, NA, stage:T3N1M0, alive, 1418 days
9.0
U0072
0 years, male, NA, stage:T3N0M0, alive, 2772 days
9.0
U0268
0 years, male, NA, stage:T3N0M0, alive, 2978 days
8.9
U0084
0 years, male, NA, stage:T3N0M0, dead, 1662 days
8.9
U0336
0 years, female, NA, stage:T3N0M0, alive, 1100 days
8.9
U0290
0 years, male, NA, stage:T4N2M0, dead, 593 days
8.8
U2889
0 years, male, NA, stage:T4N0M0, alive, 623 days
8.8
U1257
0 years, male, NA, stage:T3N0M0, alive, 833 days
8.8
U2782
0 years, male, NA, stage:T3N1M1, alive, 773 days
8.8
U0193
0 years, male, NA, stage:T3N1M0, dead, 876 days
8.8
U0436
0 years, male, NA, stage:T4N1M1, alive, 960 days
8.8
U0244
0 years, female, NA, stage:T3N1M0, alive, 3184 days
8.8
U1099
0 years, female, NA, stage:T3N0M0, alive, 2068 days
8.8
U0075
0 years, male, NA, stage:T3N0M0, dead, 3 days
8.8
U1454
0 years, female, NA, stage:T3N0M0, alive, 393 days
8.8
U1258
0 years, male, NA, stage:T3N1M0, alive, 1373 days
8.8
U0999
0 years, male, NA, stage:T3N2M0, alive, 860 days
8.7
U0227
0 years, female, NA, stage:T4N2M0, alive, 291 days
8.7
U1062
0 years, female, NA, stage:T4N0M0, alive, 1689 days
8.7
U0440
0 years, female, NA, stage:T4N0M0, dead, 2743 days
8.7
U2891
0 years, male, NA, stage:T3N1M0, alive, 619 days
8.7
U1246
0 years, female, NA, stage:T3N0M0, alive, 1441 days
8.7
U0191
0 years, male, NA, stage:T3N1M0, alive, 900 days
8.7
U0938
0 years, female, NA, stage:T3N0M0, dead, 1231 days
8.7
U0323
0 years, male, NA, stage:T2N0M0, dead, 1016 days
8.6
U1213
0 years, female, NA, stage:T2N0M0, alive, 560 days
8.6
U0355
0 years, male, NA, stage:T4N1M0, dead, 1038 days
8.6
U0127
0 years, female, NA, stage:T3N0M0, dead, 2753 days
8.6
U0198
0 years, male, NA, stage:T3N1M0, alive, 1272 days
8.6
U0444
0 years, female, NA, stage:T4N1M0, alive, 1841 days
8.5
U0111
0 years, male, NA, stage:T2N0M0, alive, 1117 days
8.5
U0373
0 years, female, NA, stage:T3N0M0, alive, 1822 days
8.5
U0070
0 years, male, NA, stage:T1N0M0, dead, 1319 days
8.5
U1347
0 years, female, NA, stage:T3N0M0, alive, 1401 days
8.5
U1065
0 years, female, NA, stage:T3N2M0, alive, 2954 days
8.5
U1032
0 years, male, NA, stage:T3N1M0, alive, 2113 days
8.5
U0248
0 years, male, NA, stage:T3N0M0, alive, 1870 days
8.5
U0218
0 years, female, NA, stage:T3N0M0, alive, 714 days
8.4
U0349
0 years, male, NA, stage:T3N1M0, alive, 2682 days
8.4
U0361
0 years, male, NA, stage:T3N0M0, alive, 686 days
8.4
U0307
0 years, male, NA, stage:T3N0M0, alive, 2921 days
8.4
U0449
0 years, female, NA, stage:T3N0M0, alive, 1851 days
8.4
U0256
0 years, male, NA, stage:T3N0M0, alive, 738 days
8.3
U1158
0 years, female, NA, stage:T3N1M0, alive, 721 days
8.3
U2815
0 years, female, NA, stage:T3N0M0, alive, 717 days
8.3
U0360
0 years, female, NA, stage:T3N0M0, dead, 1016 days
8.3
U1102
0 years, male, NA, stage:T2N0M0, alive, 1354 days
8.3
U3042
0 years, male, NA, stage:T3N0M0, alive, 324 days
8.2
U0101
0 years, male, NA, stage:T3N1M1, alive, 1878 days
8.2
U0186
0 years, female, NA, stage:T2N0M0, alive, 3726 days
8.2
U0115
0 years, female, NA, stage:T3N0M0, dead, 1738 days
8.2
U0459
0 years, female, NA, stage:T3N0M0, alive, 966 days
8.2
U0446
0 years, male, NA, stage:T2N0M0, alive, 1446 days
8.2
U0280
0 years, male, NA, stage:T3N1M1, alive, 2731 days
8.1
U3050
0 years, female, NA, stage:T3N0M0, alive, 407 days
8.1
U1228
0 years, male, NA, stage:T3N0M0, alive, 1333 days
8.1
U0145
0 years, male, NA, stage:T3N1M1, alive, 623 days
8.1
U0099
0 years, female, NA, stage:T3N0M0, dead, 986 days
8.1
U0224
0 years, female, NA, stage:T3N0M0, alive, 2367 days
8.1
U0156
0 years, female, NA, stage:T4N1M0, alive, 1573 days
8.1
U0195
0 years, male, NA, stage:T3N0M0, alive, 3326 days
8.0
U1235
0 years, female, NA, stage:T2N0M0, alive, 1319 days
8.0
U3000
0 years, female, NA, stage:T3N0M0, alive, 584 days
8.0
U0453
0 years, male, NA, stage:T3N0M0, alive, 2859 days
8.0
U1201
0 years, male, NA, stage:T3N2M0, alive, 1484 days
8.0
U1047
0 years, female, NA, stage:T4N2M0, alive, 3592 days
8.0
U1436
0 years, female, NA, stage:T3N0M0, alive, 1745 days
7.9
U1346
0 years, female, NA, stage:T3N0M0, alive, 1137 days
7.9
U0429
0 years, female, NA, stage:T3N0M1, alive, 1099 days
7.9
U0404
0 years, female, NA, stage:T3N2M0, dead, 204 days
7.8
U1072
0 years, male, NA, stage:T1N0M0, alive, 1446 days
7.8
U0396
0 years, male, NA, stage:T4N2M0, alive, 2243 days
7.8
U0933
0 years, male, NA, stage:T3N2M0, dead, 1960 days
7.8
U0133
0 years, female, NA, stage:T3N0M0, alive, 773 days
7.8
U0231
0 years, female, NA, stage:T2N0M0, alive, 991 days
7.8
U0266
0 years, female, NA, stage:T3N1M0, dead, 2221 days
7.8
U0318
0 years, male, NA, stage:T3N0M0, alive, 762 days
7.7
U0390
0 years, male, NA, stage:T3N1M0, alive, 871 days
7.7
U2856
0 years, female, NA, stage:T4N1M1, alive, 660 days
7.7
U0004
0 years, female, NA, stage:T4N0M0, alive, 3649 days
7.7
U0443
0 years, male, NA, stage:T3N0M0, alive, 1677 days
7.6
U0433
0 years, male, NA, stage:T4N1M1, dead, 440 days
7.6
U2902
0 years, female, NA, stage:T2N0M0, alive, 596 days
7.6
U1141
0 years, female, NA, stage:T4N1M1, dead, 596 days
7.5
U2747
0 years, female, NA, stage:T4N1M0, dead, 54 days
7.5
U1472
0 years, female, NA, stage:T3N1M0, alive, 1316 days
7.5
U0170
0 years, male, NA, stage:T4N1M0, dead, 832 days
7.5
U1114
0 years, female, NA, stage:TXNXM1, dead, 473 days
7.4
U0898
0 years, female, NA, stage:T4aN0M0, dead, 340 days
7.4
U0379
0 years, male, NA, stage:T2N0M0, alive, 1819 days
7.4
U1392
0 years, male, NA, stage:T3N0M0, alive, 1513 days
7.4
U0239
0 years, male, NA, stage:T2N0M0, alive, 67 days
7.4
U2803
0 years, male, NA, stage:T3N1M0, alive, 744 days
7.3
U0142
0 years, female, NA, stage:T4N1M0, alive, 2340 days
7.2
U0189
0 years, female, NA, stage:T3N0M0, dead, 1823 days
7.2
U0281
0 years, male, NA, stage:T3N2M0, alive, 933 days
7.2
U0970
0 years, female, NA, stage:T4N1M0, alive, 939 days
7.1
U0314
0 years, female, NA, stage:T1N0M0, dead, 2436 days
7.1
U0250
0 years, female, NA, stage:T4N0M0, dead, 906 days
7.1
U0270
0 years, female, NA, stage:T1N0M0, alive, 2187 days
7.1
U0327
0 years, male, NA, stage:T4N0M0, alive, 833 days
7.0
U0450
0 years, female, NA, stage:T3N1M0, alive, 763 days
7.0
U0163
0 years, male, NA, stage:T4N0M0, alive, 697 days
6.9
U0154
0 years, male, NA, stage:T3N0M0, alive, 820 days
6.9
U0211
0 years, female, NA, stage:T3N1M0, alive, 1236 days
6.9
U0949
0 years, female, NA, stage:T3N0M1, dead, 594 days
6.8
U1013
0 years, female, NA, stage:T2N1M0, alive, 1439 days
6.8
U0253
0 years, female, NA, stage:T3N0M0, alive, 958 days
6.7
U0350
0 years, female, NA, stage:T4N0M0, alive, 770 days
6.6
U1473
0 years, female, NA, stage:T3N0M0, alive, 1553 days
6.6
U0169
0 years, male, NA, stage:T4N2M0, alive, 616 days
6.6
U0167
0 years, male, NA, stage:T3N1M0, alive, 1820 days
6.5
U0246
0 years, female, NA, stage:T4N0M0, dead, 1192 days
6.5
U0274
0 years, male, NA, stage:T3N0M0, dead, 1570 days
6.4
U0126
0 years, male, NA, stage:T3N0M0, dead, 2876 days
6.4
U0354
0 years, male, NA, stage:T3N1M0, alive, 430 days
6.3
U0915
0 years, female, NA, stage:T3N0M0, alive, 1613 days
6.2
U1007
0 years, male, NA, stage:T3N0M0, alive, 1333 days
6.2
U0426
0 years, male, NA, stage:T3N0M0, dead, 976 days
6.1
U0112
0 years, female, NA, stage:T3N0M1, alive, 551 days
6.1
U0234
0 years, male, NA, stage:T1N1M0, alive, 990 days
6.0
U0317
0 years, female, NA, stage:T3N2M0, alive, 3209 days
5.9
U1384
0 years, male, NA, stage:T4N1M0, alive, 1319 days
0.4
U0074
0 years, female, NA, stage:T3N0M0, dead, 1438 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BRAF is not prognostic in Rectum Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4.0
Number of samples
88
Samples
Sample
Description
TPM
TCGA-EI-6508-01A
0 years, female, white, stage:Stage IIIB, alive, 636 days
7.3
TCGA-DC-6157-01A
0 years, male, black or african american, stage:Stage I, alive, 1581 days
6.8
TCGA-F5-6464-01A
0 years, female, white, stage:Stage IIIC, dead, 303 days
6.7
TCGA-F5-6811-01A
0 years, female, white, stage:Stage IIA, alive, 979 days
6.7
TCGA-DC-6158-01A
0 years, male, white, stage:Stage I, dead, 334 days
6.5
TCGA-AF-6655-01A
0 years, male, white, stage:Stage IIIA, alive, 609 days
6.3
TCGA-CL-5917-01A
0 years, female, white, stage:Stage IIIC, alive, 2376 days
6.2
TCGA-DC-6156-01A
0 years, male, white, stage:Stage IVA, alive, 943 days
6.2
TCGA-AH-6644-01A
0 years, male, white, stage:'--, alive, 838 days
5.6
TCGA-DC-6683-01A
0 years, male, white, stage:Stage IIIB, alive, 762 days
5.6
TCGA-AG-4022-01A
0 years, female, stage:Stage II, alive, 1400 days
5.4
TCGA-AG-3731-01A
0 years, male, stage:Stage IV, alive, 1126 days
5.4
TCGA-F5-6864-01A
0 years, female, white, stage:Stage IIIB, alive, 379 days
5.3
TCGA-AF-2687-01A
0 years, male, white, stage:Stage IIIC, alive, 1427 days
5.1
TCGA-EI-6507-01A
0 years, male, white, stage:Stage IIA, alive, 607 days
5.1
TCGA-DY-A0XA-01A
0 years, female, white, stage:Stage IIA, alive, 3846 days
5.1
TCGA-F5-6702-01A
0 years, male, white, stage:Stage IVA, dead, 869 days
5.0
TCGA-AF-A56K-01A
0 years, male, black or african american, stage:Stage IIA, alive, 2635 days
4.9
TCGA-DC-6160-01A
0 years, male, white, stage:Stage I, alive, 1339 days
4.8
TCGA-EI-6514-01A
0 years, female, white, stage:Stage IIA, alive, 496 days
4.8
TCGA-AG-3742-01A
0 years, female, stage:Stage I, alive, 30 days
4.8
TCGA-AF-6672-01A
0 years, male, white, stage:Stage IV, alive, 748 days
4.7
TCGA-EI-6917-01A
0 years, male, white, stage:Stage IIIA, alive, 531 days
4.7
TCGA-AG-3732-01A
0 years, female, stage:Stage I, alive, 1003 days
4.5
TCGA-AH-6643-01A
0 years, male, white, stage:Stage IIIC, dead, 1314 days
4.5
TCGA-EF-5831-01A
0 years, male, white, stage:Stage IIA, alive, 127 days
4.5
TCGA-F5-6571-01A
0 years, female, white, stage:Stage IIA, alive, 1288 days
4.4
TCGA-G5-6235-01A
0 years, male, white, stage:Stage IIIB, alive, 1696 days
4.4
TCGA-AF-6136-01A
0 years, female, white, stage:Stage IIIB, alive, 741 days
4.3
TCGA-AG-4021-01A
0 years, female, stage:Stage IV, dead, 121 days
4.2
TCGA-DY-A1DE-01A
0 years, female, white, stage:Stage IIA, alive, 3932 days
4.2
TCGA-G5-6233-01A
0 years, male, white, stage:'--, dead, 556 days
4.2
TCGA-EI-6885-01A
0 years, female, white, stage:Stage IV, alive, 415 days
4.1
TCGA-EI-6881-01A
0 years, male, white, stage:Stage IIIA, alive, 499 days
4.1
TCGA-DY-A1DC-01A
0 years, female, white, stage:Stage IIA, dead, 1258 days
4.1
TCGA-DT-5265-01A
0 years, male, asian, stage:Stage II, alive, 384 days
4.0
TCGA-EI-7002-01A
0 years, male, white, stage:Stage IV, alive, 364 days
4.0
TCGA-EI-7004-01A
0 years, female, white, stage:'--, alive, 257 days
4.0
TCGA-EI-6511-01A
0 years, male, white, stage:Stage IIIB, alive, 482 days
4.0
TCGA-AH-6903-01A
0 years, male, white, stage:Stage IIIB, alive, 592 days
4.0
TCGA-F5-6814-01A
0 years, male, white, stage:Stage IIA, alive, 1131 days
4.0
TCGA-EI-6510-01A
0 years, female, white, stage:'--, alive, 556 days
3.9
TCGA-F5-6465-01A
0 years, female, white, stage:Stage IIA, alive, 1506 days
3.9
TCGA-EI-6513-01A
0 years, male, white, stage:Stage IIIB, alive, 497 days
3.9
TCGA-AH-6544-01A
0 years, male, white, stage:'--, alive, 1173 days
3.9
TCGA-AF-A56N-01A
0 years, female, black or african american, stage:Stage IIA, alive, 360 days
3.9
TCGA-EI-6882-01A
0 years, male, white, stage:Stage IIA, alive, 262 days
3.8
TCGA-AG-3592-01A
0 years, male, stage:Stage IIA, alive, 1035 days
3.8
TCGA-F5-6863-01A
0 years, female, white, stage:Stage IIIB, dead, 361 days
3.8
TCGA-DC-6682-01A
0 years, male, white, stage:Stage IIA, alive, 762 days
3.8
TCGA-AH-6547-01A
0 years, female, white, stage:'--, dead, 76 days
3.8
TCGA-G5-6641-01A
0 years, male, white, stage:Stage IIIA, alive, 804 days
3.7
TCGA-EI-6884-01A
0 years, male, white, stage:Stage IIIA, alive, 328 days
3.7
TCGA-EI-6883-01A
0 years, male, white, stage:Stage IIC, alive, 350 days
3.7
TCGA-AH-6549-01A
0 years, male, white, stage:'--, alive, 532 days
3.6
TCGA-DY-A1DG-01A
0 years, male, white, stage:Stage IVA, dead, 1566 days
3.6
TCGA-F5-6813-01A
0 years, male, white, stage:Stage IIIC, dead, 598 days
3.6
TCGA-CI-6620-01A
0 years, female, white, stage:Stage IVA, alive, 1009 days
3.5
TCGA-AF-2693-01A
0 years, male, white, stage:Stage I, alive, 1155 days
3.5
TCGA-DC-6154-01A
0 years, female, white, stage:Stage IVA, alive, 365 days
3.5
TCGA-AH-6897-01A
0 years, male, white, stage:Stage I, alive, 804 days
3.5
TCGA-CI-6621-01A
0 years, male, white, stage:Stage IIIB, alive, 419 days
3.4
TCGA-DY-A1DD-01A
0 years, female, white, stage:Stage IIIB, dead, 1741 days
3.3
TCGA-G5-6572-01A
0 years, male, white, stage:'--, dead, 1432 days
3.3
TCGA-DC-6681-01A
0 years, female, white, stage:Stage IVA, alive, 790 days
3.3
TCGA-CL-4957-01A
0 years, female, stage:'--, dead, 425 days
3.2
TCGA-AF-A56L-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2007 days
3.1
TCGA-DC-5869-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 943 days
3.1
TCGA-F5-6812-01A
0 years, male, white, stage:Stage IIA, alive, 1110 days
3.1
TCGA-DY-A1H8-01A
0 years, female, white, stage:Stage IIIA, dead, 992 days
3.1
TCGA-EI-6506-01A
0 years, female, white, stage:Stage IIA, alive, 625 days
3.1
TCGA-AF-5654-01A
0 years, female, white, stage:Stage I, dead, 512 days
3.0
TCGA-CI-6622-01A
0 years, male, white, stage:Stage IIB, alive, 1362 days
2.9
TCGA-AF-3911-01A
0 years, male, white, stage:Stage IIIC, alive, 1148 days
2.8
TCGA-AG-3902-01A
0 years, male, stage:Stage IIA, alive, 974 days
2.8
TCGA-EI-6512-01A
0 years, female, white, stage:Stage IIIB, alive, 538 days
2.8
TCGA-EF-5830-01A
0 years, male, white, stage:Stage IIB, alive, 106 days
2.7
TCGA-AG-3591-01A
0 years, female, stage:Stage IIA, alive, 1035 days
2.7
TCGA-BM-6198-01A
0 years, male, white, stage:Stage IIIB, alive, 646 days
2.7
TCGA-EI-6509-01A
0 years, male, white, stage:Stage IIIC, alive, 517 days
2.7
TCGA-DC-4749-01A
0 years, male, white, stage:Stage I, alive, 762 days
2.6
TCGA-DC-4745-01A
0 years, female, white, stage:Stage IIIB, alive, 639 days
2.6
TCGA-DY-A1DF-01A
0 years, female, white, stage:Stage IIIC, dead, 734 days
2.6
TCGA-AF-2690-01A
0 years, female, white, stage:Stage IIIC, dead, 524 days
2.5
TCGA-F5-6861-01A
0 years, female, white, stage:Stage IIA, alive, 1160 days
2.5
TCGA-AF-4110-01A
0 years, male, white, stage:Stage IVA, alive, 912 days
2.4
TCGA-DC-5337-01A
0 years, male, white, stage:Stage I, alive, 792 days
1.2
TCGA-DC-6155-01A
0 years, female, white, stage:Stage IIIA, alive, 425 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BRAF is not prognostic in Rectum Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.8
Number of samples
207
Samples
Sample
Description
TPM
U2836
0 years, male, NA, stage:T3N0M0, alive, 322 days
21.5
U0216
0 years, male, NA, stage:T2N0M0, alive, 2684 days
20.4
U2955
0 years, male, NA, stage:T3N1M0, alive, 181 days
17.8
U0173
0 years, male, NA, stage:T2N0M0, dead, 2375 days
17.1
U0593
0 years, male, NA, stage:T4bN0M0, alive, 876 days
16.8
U0713
0 years, male, NA, stage:T2N0M0, alive, 359 days
15.8
U0641
0 years, female, NA, stage:T3N0M0, dead, 1626 days
15.6
U0651
0 years, male, NA, stage:T3N0M0, alive, 1354 days
15.3
U0093
0 years, male, NA, stage:T3N2M0, dead, 1118 days
15.0
U0512
0 years, male, NA, stage:T3N0M0, alive, 2550 days
14.7
U0293
0 years, male, NA, stage:T3N1M0, alive, 2717 days
14.2
U0603
0 years, male, NA, stage:T2N1M0, alive, 1904 days
14.2
U0296
0 years, male, NA, stage:T3N0M0, alive, 2610 days
14.1
U0538
0 years, female, NA, stage:T3N1M0, alive, 1308 days
14.0
U0138
0 years, male, NA, stage:T3N1M0, dead, 2472 days
13.9
U0650
0 years, female, NA, stage:T2N2M0, alive, 1331 days
13.9
U0750
0 years, female, NA, stage:T3N2M0, dead, 1393 days
13.9
U0220
0 years, male, NA, stage:T2N0M0, alive, 1066 days
13.8
U2972
0 years, male, NA, stage:T3N0M0, alive, 161 days
13.8
U0137
0 years, male, NA, stage:T3N1M0, dead, 1799 days
13.7
U0159
0 years, female, NA, stage:T3N1M0, alive, 1517 days
13.6
U3023
0 years, female, NA, stage:T2N0M0, alive, 404 days
13.5
U0800
0 years, male, NA, stage:T3N2M1, dead, 411 days
13.5
U0558
0 years, female, NA, stage:T3N2M0, alive, 2011 days
13.4
U0645
0 years, male, NA, stage:T3N0M0, alive, 1567 days
13.3
U0591
0 years, male, NA, stage:T2N0M0, alive, 1023 days
13.2
U0478
0 years, male, NA, stage:T4N2M0, alive, 2051 days
13.2
U0584
0 years, male, NA, stage:T3N2M0, alive, 2705 days
13.0
U0282
0 years, male, NA, stage:T3N2M0, dead, 1869 days
13.0
U0343
0 years, female, NA, stage:T2N0M0, alive, 701 days
12.9
U2761
0 years, female, NA, stage:T3N1M0, alive, 447 days
12.9
U0647
0 years, female, NA, stage:T3N0M0, alive, 1476 days
12.9
U0194
0 years, male, NA, stage:T3N1M0, alive, 680 days
12.8
U0264
0 years, male, NA, stage:T4N2M0, alive, 2020 days
12.8
U0422
0 years, female, NA, stage:T3N2M1, dead, 1710 days
12.8
U0415
0 years, male, NA, stage:T3N1M0, alive, 2526 days
12.8
U0237
0 years, male, NA, stage:T3N1M0, alive, 2492 days
12.7
U0351
0 years, female, NA, stage:T3N2M0, alive, 2886 days
12.7
U0695
0 years, male, NA, stage:T3N0M0, alive, 566 days
12.7
U0458
0 years, male, NA, stage:T3N2M0, alive, 1073 days
12.6
U0339
0 years, male, NA, stage:T3N2M0, alive, 2155 days
12.6
U0637
0 years, male, NA, stage:T3N1M0, alive, 1997 days
12.5
U0359
0 years, male, NA, stage:T3N2M0, dead, 2443 days
12.5
U0255
0 years, female, NA, stage:T3N2M0, dead, 1079 days
12.5
U0502
0 years, male, NA, stage:T4N1M0, alive, 1065 days
12.5
U0861
0 years, female, NA, stage:T4N2M1, dead, 184 days
12.4
U0648
0 years, female, NA, stage:T3N0M0, alive, 1415 days
12.4
U0279
0 years, male, NA, stage:T2N1M0, dead, 176 days
12.4
U0402
0 years, female, NA, stage:T3N1M0, dead, 2487 days
12.4
U2991
0 years, female, NA, stage:T1N0M0, alive, 135 days
12.3
U0213
0 years, male, NA, stage:T3N1M0, alive, 3018 days
12.3
U3049
0 years, male, NA, stage:T2N0M0, alive, 533 days
12.2
U0604
0 years, male, NA, stage:T3N1M0, alive, 1522 days
12.1
U0857
0 years, male, NA, stage:T4N2M1, dead, 954 days
12.1
U0592
0 years, female, NA, stage:T2N0M0, dead, 670 days
12.1
U0276
0 years, male, NA, stage:T3N1M1, alive, 934 days
12.1
U0353
0 years, female, NA, stage:T1N0M0, alive, 2912 days
12.0
U0601
0 years, female, NA, stage:T4N1M0, alive, 1368 days
12.0
U0553
0 years, female, NA, stage:T3N2M0, alive, 1704 days
12.0
U0366
0 years, male, NA, stage:T3NXM1, alive, 895 days
11.9
U0311
0 years, female, NA, stage:T3N1M0, alive, 1176 days
11.8
U0346
0 years, male, NA, stage:T4N2M0, alive, 1148 days
11.8
U0077
0 years, female, NA, stage:T2N0M0, dead, 588 days
11.8
U0534
0 years, female, NA, stage:T3N2M0, alive, 1361 days
11.7
U0242
0 years, male, NA, stage:T3N0M0, alive, 2950 days
11.7
U0468
0 years, female, NA, stage:T3N0M0, alive, 1921 days
11.7
U0605
0 years, male, NA, stage:T2N0M0, alive, 952 days
11.7
U0325
0 years, male, NA, stage:T3N0M0, dead, 1947 days
11.6
U0485
0 years, male, NA, stage:T3N0M0, dead, 2737 days
11.6
U0001
0 years, female, NA, stage:T3N0M0, alive, 3188 days
11.6
U0212
0 years, male, NA, stage:T3N0M1, alive, 1330 days
11.5
U0294
0 years, male, NA, stage:T4N0M1, alive, 561 days
11.5
U2834
0 years, male, NA, stage:T3N1M0, alive, 323 days
11.4
U0508
0 years, male, NA, stage:T3N1M0, alive, 1120 days
11.4
U0251
0 years, male, NA, stage:T2N0M0, alive, 1906 days
11.4
U0406
0 years, female, NA, stage:T4N2M1, dead, 778 days
11.4
U0409
0 years, female, NA, stage:T3N1M0, alive, 934 days
11.4
U0466
0 years, male, NA, stage:T3N0M0, alive, 1381 days
11.4
U0578
0 years, male, NA, stage:T2N2M0, alive, 1724 days
11.3
U0581
0 years, female, NA, stage:T3N2M0, alive, 1660 days
11.3
U0498
0 years, female, NA, stage:T4N1M0, alive, 1906 days
11.3
U0640
0 years, male, NA, stage:T2N0M0, alive, 1696 days
11.2
U0657
0 years, female, NA, stage:T2N0M0, dead, 1109 days
11.2
U0568
0 years, male, NA, stage:T4N1M0, alive, 1287 days
11.1
U0539
0 years, male, NA, stage:T4N2M0, alive, 2017 days
11.1
U2994
0 years, female, NA, stage:T4N1M0, alive, 132 days
11.0
U0305
0 years, male, NA, stage:T3N1M0, alive, 2676 days
11.0
U0096
0 years, female, NA, stage:T4N2M1, dead, 257 days
11.0
U0299
0 years, female, NA, stage:T4N2M0, alive, 43426 days
11.0
U0434
0 years, male, NA, stage:T2N0M0, alive, 2558 days
11.0
U0120
0 years, female, NA, stage:T3N0M0, alive, 3233 days
10.9
U0654
0 years, male, NA, stage:T3N2M0, alive, 1220 days
10.9
U0241
0 years, female, NA, stage:T2N1M0, alive, 552 days
10.9
U0431
0 years, female, NA, stage:T3N1M0, alive, 695 days
10.9
U0405
0 years, male, NA, stage:T3N1M0, alive, 829 days
10.9
U0552
0 years, male, NA, stage:T3N2M0, alive, 1701 days
10.8
U0862
0 years, male, NA, stage:T4N2M1, dead, 1064 days
10.8
U0533
0 years, male, NA, stage:T3N2M0, alive, 2248 days
10.7
U3047
0 years, male, NA, stage:T3N2M0, alive, 205 days
10.7
U0088
0 years, male, NA, stage:T3N1M1, dead, 260 days
10.7
U0602
0 years, male, NA, stage:T2N0M0, alive, 1385 days
10.7
U2779
0 years, male, NA, stage:T3N0M0, alive, 419 days
10.7
U0228
0 years, male, NA, stage:T2N0M0, alive, 963 days
10.7
U0550
0 years, male, NA, stage:T3N2M0, alive, 2191 days
10.7
U0638
0 years, male, NA, stage:T2N0M0, alive, 1801 days
10.6
U0652
0 years, male, NA, stage:T3N0M0, alive, 1319 days
10.6
U0147
0 years, female, NA, stage:T3N0M0, dead, 2085 days
10.6
U0542
0 years, male, NA, stage:T3N2M0, dead, 1482 days
10.6
U0577
0 years, female, NA, stage:T3N2M0, alive, 2474 days
10.6
U0418
0 years, male, NA, stage:T4N1M0, alive, 1246 days
10.5
U0557
0 years, female, NA, stage:T3N2M0, alive, 2009 days
10.4
U0494
0 years, male, NA, stage:T4N2M0, alive, 1290 days
10.4
U0594
0 years, male, NA, stage:T3N0M0, alive, 2852 days
10.4
U0649
0 years, male, NA, stage:T2N0M0, alive, 1424 days
10.4
U2960
0 years, male, NA, stage:T3N1M0, alive, 176 days
10.4
U0454
0 years, male, NA, stage:T3N1M0, alive, 2997 days
10.3
U0271
0 years, female, NA, stage:T3N1M0, alive, 2414 days
10.3
U0331
0 years, male, NA, stage:T3N1M1, dead, 906 days
10.3
U0572
0 years, female, NA, stage:T3N1M0, alive, 2621 days
10.3
U0643
0 years, female, NA, stage:T2N1M0, dead, 1583 days
10.2
U0776
0 years, male, NA, stage:T4N2M0, alive, 1702 days
10.2
U0848
0 years, male, NA, stage:T3N1M1, dead, 1185 days
10.2
U0238
0 years, male, NA, stage:T3N0M0, dead, 868 days
10.2
U0230
0 years, female, NA, stage:T1N1M0, alive, 3152 days
10.2
U0852
0 years, male, NA, stage:T3N2M1, alive, 1651 days
10.2
U2943
0 years, male, NA, stage:T3N0M0, alive, 189 days
10.2
U0556
0 years, male, NA, stage:T3N2M0, alive, 2037 days
10.1
U0793
0 years, male, NA, stage:T3N1M1, dead, 195 days
10.1
U0600
0 years, male, NA, stage:T3N1M0, alive, 1659 days
10.1
U0116
0 years, male, NA, stage:T3N1M0, dead, 930 days
10.1
U0805
0 years, male, NA, stage:T3N1M1, dead, 731 days
10.1
U0417
0 years, female, NA, stage:T3N2M1, dead, 893 days
10.0
U0555
0 years, male, NA, stage:T3N2M0, alive, 2043 days
10.0
U0380
0 years, male, NA, stage:T2N0M0, alive, 2155 days
10.0
U0155
0 years, male, NA, stage:T2N0M0, dead, 1672 days
10.0
U0079
0 years, male, NA, stage:T4N2M0, dead, 1891 days
9.9
U0232
0 years, female, NA, stage:T2N0M0, dead, 994 days
9.9
U0565
0 years, male, NA, stage:T4N1M0, alive, 1452 days
9.8
U0243
0 years, female, NA, stage:T3N2M0, alive, 2975 days
9.8
U0205
0 years, female, NA, stage:T3N2M0, alive, 2984 days
9.7
U0118
0 years, female, NA, stage:T3N2M0, dead, 350 days
9.6
U2764
0 years, male, NA, stage:T3N2M0, alive, 440 days
9.6
U0596
0 years, male, NA, stage:T3N0M0, alive, 2233 days
9.6
U0174
0 years, male, NA, stage:T3N0M0, alive, 450 days
9.6
U0188
0 years, female, NA, stage:T3N1M0, alive, 2134 days
9.6
U0809
0 years, female, NA, stage:T3N1M1, dead, 275 days
9.5
U0802
0 years, male, NA, stage:T3N2M1, dead, 338 days
9.5
U0132
0 years, male, NA, stage:T3N1M0, alive, 1798 days
9.5
U0820
0 years, male, NA, stage:T3NXM1, dead, 622 days
9.5
U0190
0 years, male, NA, stage:T3N0M0, alive, 2367 days
9.4
U0814
0 years, female, NA, stage:T3N1M1, dead, 482 days
9.3
U0391
0 years, female, NA, stage:T3N0M0, alive, 1179 days
9.3
U0561
0 years, female, NA, stage:T3N2M0, alive, 1577 days
9.3
U0675
0 years, female, NA, stage:T4N1M0, dead, 89 days
9.3
U0407
0 years, male, NA, stage:T3N1M0, dead, 2027 days
9.3
U0671
0 years, male, NA, stage:T3N1M0, dead, 785 days
9.2
U0334
0 years, male, NA, stage:T3N1M0, alive, 3171 days
9.2
U0128
0 years, female, NA, stage:T3N1M0, alive, 449 days
9.2
U0694
0 years, male, NA, stage:T4N0M0, dead, 489 days
9.2
U0329
0 years, male, NA, stage:T3N1M0, dead, 805 days
9.1
U0532
0 years, male, NA, stage:T3N0M0, dead, 730 days
9.1
U0656
0 years, male, NA, stage:T3N2M0, alive, 1150 days
9.1
U0371
0 years, female, NA, stage:T3N0M0, alive, 2688 days
9.1
U0865
0 years, female, NA, stage:T3N1M1, dead, 856 days
9.0
U0430
0 years, male, NA, stage:T3N2M0, dead, 2472 days
9.0
U0663
0 years, female, NA, stage:T3N1M0, alive, 762 days
9.0
U0388
0 years, male, NA, stage:T2N1M0, alive, 2186 days
8.9
U0080
0 years, female, NA, stage:T3N0M0, dead, 489 days
8.9
U0470
0 years, female, NA, stage:T2N2M0, alive, 961 days
8.9
U0097
0 years, male, NA, stage:T3N0M1, dead, 2903 days
8.9
U0258
0 years, male, NA, stage:T4N1M2, dead, 195 days
8.8
U0322
0 years, male, NA, stage:T4N2M0, alive, 1694 days
8.8
U0803
0 years, female, NA, stage:T3N1M1, dead, 495 days
8.8
U0324
0 years, female, NA, stage:T4N1M0, alive, 938 days
8.7
U0511
0 years, female, NA, stage:T3N0M0, dead, 2387 days
8.7
U0114
0 years, male, NA, stage:T3N0M0, alive, 1910 days
8.7
U0304
0 years, male, NA, stage:T3N2M0, alive, 2065 days
8.7
U0707
0 years, male, NA, stage:T3N1M0, alive, 518 days
8.6
U0192
0 years, male, NA, stage:T3N0M0, alive, 2081 days
8.6
U0423
0 years, female, NA, stage:T4N2M0, alive, 2735 days
8.6
U0086
0 years, female, NA, stage:T3N1M0, dead, 594 days
8.6
U0535
0 years, female, NA, stage:T4N1M0, alive, 2473 days
8.5
U0457
0 years, male, NA, stage:T3N0M0, alive, 833 days
8.5
U0374
0 years, female, NA, stage:T2N0M0, alive, 1067 days
8.4
U0437
0 years, male, NA, stage:T1N1M0, alive, 849 days
8.4
U0849
0 years, female, NA, stage:T4N0M1, dead, 267 days
8.4
U0484
0 years, male, NA, stage:T4N2M0, alive, 1275 days
8.4
U0642
0 years, male, NA, stage:T3N0M0, alive, 1603 days
8.3
U0658
0 years, male, NA, stage:T3N2M0, alive, 1108 days
8.3
U0140
0 years, male, NA, stage:T3N2M0, alive, 2655 days
8.2
U0686
0 years, female, NA, stage:T4bN0M0, dead, 123 days
8.2
U0497
0 years, female, NA, stage:T3N1M0, alive, 1414 days
8.1
U0514
0 years, female, NA, stage:T2N2M0, alive, 2799 days
8.1
U0545
0 years, male, NA, stage:T3N0M0, alive, 2340 days
8.0
U0595
0 years, male, NA, stage:T2N0M0, alive, 2535 days
8.0
U0562
0 years, female, NA, stage:T3N1M0, alive, 3092 days
7.9
U0364
0 years, female, NA, stage:T4N2M1, dead, 151 days
7.9
U0587
0 years, male, NA, stage:T3N1M0, alive, 2107 days
7.9
U0576
0 years, male, NA, stage:T3N2M0, alive, 2540 days
7.8
U0666
0 years, male, NA, stage:T3N1M0, alive, 709 days
7.7
U0492
0 years, male, NA, stage:T3N2M0, alive, 1114 days
7.6
U0284
0 years, male, NA, stage:T3N2M0, alive, 581 days
7.5
U0030
0 years, female, NA, stage:T2N0M0, dead, 987 days
7.4
U0519
0 years, male, NA, stage:T4N2M0, dead, 519 days
7.2
U0298
0 years, male, NA, stage:T3N1M0, alive, 513 days
6.9
U0804
0 years, female, NA, stage:T3N2M1, dead, 380 days
6.9
U0579
0 years, female, NA, stage:T4aN0M0, alive, 2845 days
6.6
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COLON ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
197
Samples
Sample ID
Sample type
nRPX
411d9597-c785-4de5-b449-29a80d_D2
Normal
0.8
b2400046-1d25-429d-a821-6040a6
Tumor
0.8
7cc7f69f-99f5-4b23-a9e0-ba0dc8_D8
Tumor
0.7
e74089a9-f78c-4ffe-8174-aef71b_D2
Normal
0.6
c7aeb685-31b3-445e-8177-a3e729_D3
Tumor
0.5
d8805fa4-30f9-4417-907e-fdc50c_D2
Normal
0.5
4c9dcc8c-ccdc-4336-8e23-107feb_D2
Normal
0.5
02cde0c0-6840-495b-9b11-007d82_D2
Normal
0.5
154115ac-2ec2-439d-b55e-0464ee_D2
Normal
0.5
a313f6ef-5994-4d49-9e66-c26911_D2
Normal
0.4
65867ab1-5eab-44a8-b2bb-d27263_D2
Normal
0.4
176d1b96-8c6e-44fe-8a32-e15194_D2
Normal
0.4
fc9b09af-23b8-4ffe-b6c6-41236d_D2
Normal
0.4
51590333-cfe5-4ce5-b8ff-58fa3c_D2
Normal
0.4
82157a70-12f1-4913-b548-d98881_D2
Normal
0.4
64ed43a2-f083-43cb-9d0d-118495_D2
Normal
0.4
642fc6c3-8d4a-4e3d-ad0a-cc088a_D2
Tumor
0.4
b3696374-c6c0-49dd-833e-596e26_D2
Normal
0.4
bc574f73-89ba-44d7-992e-82622c_D3
Tumor
0.3
58a92726-4d1f-4e44-8938-52b97d_D3
Tumor
0.3
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Tumor
0.3
92c1ebb5-ac1d-4bf5-a14f-516e1d_D3
Tumor
0.3
3a17283c-a0f4-4514-956b-080d11_D2
Normal
0.3
d0511ea6-43c3-4c61-b08e-cf49b7_D3
Tumor
0.3
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Normal
0.3
9bf309bc-0fb6-4060-aba2-888eb3_D2
Tumor
0.3
cd6a4013-2958-44b9-a4f1-45c9e4_D2
Tumor
0.3
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Normal
0.3
820a3f08-5bb1-44b3-a133-ee167e_D2
Tumor
0.3
3e8019e8-125f-4615-a1fa-a448e9_D2
Normal
0.3
067db520-1b1f-4569-9414-e37a6e_D2
Normal
0.3
54565eae-05c5-4dae-bde9-ae4874_D2
Normal
0.3
66b829db-1cdd-460d-b2f3-0e9ca9_D3
Tumor
0.3
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Tumor
0.3
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Normal
0.3
8fab37a4-cdf9-4ce8-9081-7b9148_D2
Normal
0.3
853ecf90-71e6-4156-a56f-a34b65_D2
Normal
0.3
d7608884-a0d6-4e9e-aac7-6cd813_D3
Tumor
0.2
1425a1a1-c835-47a2-a9b9-4db5d0_D8
Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
6d9f8b06-f28c-4e9b-823b-33ebb7_D2
Normal
0.2
694e8df1-d9ee-473b-bec1-4f9237_D2
Normal
0.2
515040a4-bbfb-4a15-9e53-e7b6e6_D2
Normal
0.2
c65afd57-530c-4366-b2c8-463a46_D2
Tumor
0.2
8980bb9d-65c1-41cb-9f90-dddd5f_D2
Normal
0.2
6797a69d-2f74-44b9-8147-cd4fac_D2
Normal
0.2
2666323d-522f-4f0a-823c-ff8866_D2
Normal
0.2
bda3787a-1397-4716-bb17-4992a8_D2
Normal
0.2
bd67de01-ad7d-431a-9ad6-4dd5a1
Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Tumor
0.2
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Normal
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
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Normal
0.1
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Tumor
0.1
da747cee-5026-4923-af63-ad9f81_D2
Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
5de06adb-e00d-4114-8d76-04bd30_D2
Normal
0.1
23e938d0-92b8-4aea-90c1-4385df_D2
Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
0aef1fe8-ca61-4113-81d0-d82ee7_D2
Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
3765c09a-fff7-4b37-bf2b-452b23_D2
Normal
0.0
2f8b02e4-1848-4abc-a95e-dd9eb5_D3
Tumor
0.0
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Normal
0.0
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Tumor
0.0
1f79fed9-f0d4-4c45-acd2-ea1441_D2
Normal
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
1136008b-97ce-49b0-bf24-abbea6_D2
Normal
0.0
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Tumor
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.2
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Tumor
-0.2
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Normal
-0.2
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Tumor
-0.2
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Normal
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Normal
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Normal
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Normal
-0.2
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Tumor
-0.2
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Tumor
-0.2
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Tumor
-0.3
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Tumor
-0.3
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Normal
-0.3
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Tumor
-0.3
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Tumor
-0.3
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Normal
-0.3
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Tumor
-0.4
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Tumor
-0.4
5557e478-3e6f-475b-8acc-1b4159_D8
Tumor
-0.4
c1b66358-d103-493c-b8ec-92c43b_D1
Tumor
-0.4
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Tumor
-0.6
efee6bb9-69dd-46c2-85b3-b55962_D2
Normal
-0.8
c6ae57a7-65a0-438e-bae2-97b1c8_D3
Tumor
-0.9
Show allShow less
COLORECTAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
