We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PALM2AKAP2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
61.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
226.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
172.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
163.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
160.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
121.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
121.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
119.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
113.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
110.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
109.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
104.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
96.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
96.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
92.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
90.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
90.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
89.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
87.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
81.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
79.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
74.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
65.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
64.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
62.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
58.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
58.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
57.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
54.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
53.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
50.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
48.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
47.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
47.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
44.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
43.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
41.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
41.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
37.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
36.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
36.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
36.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
35.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
35.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
35.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
34.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
33.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
33.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
31.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
30.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
29.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
27.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
25.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
25.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
22.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
21.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
20.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
19.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
19.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
13.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
10.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
9.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
5.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PALM2AKAP2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
132.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
107.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
104.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
100.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
97.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
95.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
94.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
92.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
90.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
89.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
87.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
86.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
84.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
84.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
83.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
82.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
82.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
80.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
78.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
77.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
77.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
75.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
75.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
75.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
75.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
75.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
74.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
73.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
71.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
71.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
70.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
70.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
70.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
70.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
69.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
69.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
68.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
68.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
68.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
67.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
67.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
67.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
67.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
66.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
65.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
65.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
65.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
64.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
64.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
64.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
64.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
63.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
63.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
63.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
63.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
62.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
62.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
62.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
61.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
61.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
61.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
61.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
61.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
60.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
60.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
60.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
60.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
60.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
60.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
59.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
59.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
59.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
58.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
58.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
57.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
57.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
57.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
57.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
57.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
57.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
56.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
56.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
56.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
56.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
56.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
56.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
56.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
56.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
56.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
56.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
56.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
55.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
55.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
55.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
54.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
54.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
54.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
54.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
54.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
54.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
54.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
54.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
53.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
53.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
53.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
53.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
52.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
52.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
52.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
52.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
52.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
51.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
51.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
51.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
51.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
51.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
51.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
51.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
50.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
50.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
49.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
49.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
49.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
49.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
49.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
49.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
48.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
48.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
48.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
48.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
47.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
47.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
47.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
47.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
47.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
47.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
47.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
47.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
47.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
47.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
47.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
47.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
47.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
47.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
47.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
47.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
46.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
46.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
46.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
46.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
46.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
46.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
46.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
46.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
46.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
45.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
45.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
45.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
45.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
45.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
44.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
44.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
44.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
44.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
44.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
43.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
43.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
43.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
43.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
43.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
43.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
43.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
43.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
43.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
42.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
42.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
42.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
42.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
42.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
42.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
41.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
41.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
41.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
41.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
41.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
41.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
41.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
41.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
41.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
41.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
41.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
41.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
40.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
40.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
40.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
40.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
40.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
40.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
40.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
40.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
40.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
40.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
40.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
40.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
39.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
39.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
39.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
39.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
39.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
39.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
39.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
39.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
39.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
39.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
38.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
38.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
38.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
38.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
38.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
38.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
38.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
38.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
38.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
38.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
38.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
37.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
37.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
37.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
37.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
37.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
37.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
37.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
37.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
36.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
36.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
36.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
36.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
36.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
36.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
36.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
36.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
35.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
35.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
35.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
35.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
35.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
35.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
35.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
35.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
35.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
35.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
34.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
34.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
34.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
34.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
34.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
34.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
34.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
34.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
34.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
34.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
34.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
33.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
33.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
33.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
33.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
33.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
33.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
32.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
32.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
32.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
32.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
32.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
32.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
32.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
32.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
32.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
32.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
32.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
32.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
31.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
31.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
31.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
31.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
31.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
31.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
31.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
31.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
31.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
31.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
31.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
31.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
30.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
30.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
30.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
30.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
30.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
30.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
30.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
30.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
30.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
30.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
30.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
30.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
29.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
29.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
29.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
29.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
29.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
29.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
29.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
29.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
29.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
29.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
28.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
28.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
28.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
28.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
28.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
28.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
28.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
28.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
28.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
28.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
28.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
28.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
28.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
28.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
27.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
27.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
27.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
27.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
27.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
27.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
27.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
27.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
27.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
26.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
26.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
26.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
26.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
26.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
26.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
26.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
26.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
26.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
25.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
25.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
25.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
25.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
25.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
25.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
25.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
25.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
25.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
25.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
25.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
25.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
24.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
24.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
24.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
24.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
24.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
24.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
24.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
24.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
24.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
24.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
24.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
24.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
23.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
23.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
23.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
23.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
23.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
23.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
23.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
23.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
23.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
23.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
23.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
22.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
22.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
22.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
22.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
22.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
22.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
22.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
22.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
21.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
21.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
21.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
21.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
21.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
21.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
21.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
20.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
20.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
20.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
20.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
20.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
20.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
20.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
20.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
20.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
20.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
20.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
19.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
19.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
19.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
19.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
19.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
19.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
19.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
19.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
19.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
19.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
19.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
19.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
18.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
18.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
18.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
18.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
18.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
18.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
18.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
18.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
18.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
18.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
18.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
17.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
17.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
17.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
17.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
17.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
17.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
17.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
17.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
17.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
17.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
16.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
16.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
16.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
16.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
16.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
16.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
15.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
15.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
15.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
15.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
15.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
15.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
15.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
14.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
14.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
14.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
13.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
13.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
13.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
13.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
13.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
13.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
12.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
12.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
12.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
12.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
12.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
12.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
11.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
11.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
11.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
11.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
11.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
10.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
10.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
9.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
9.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
7.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
7.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
7.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
6.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
3.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
3.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PALM2AKAP2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
125.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
85.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
80.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
79.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
78.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
75.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
74.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
72.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
68.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
68.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
64.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
63.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
63.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
63.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
61.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
57.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
57.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
56.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
55.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
54.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
53.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
53.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
52.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
52.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
51.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
51.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
51.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
50.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
49.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
49.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
48.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
48.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
48.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
48.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
47.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
47.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
47.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
46.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
46.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
46.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
45.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
45.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
45.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
45.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
44.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
43.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
41.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
41.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
41.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
40.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
40.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
40.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
38.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
38.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
37.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
36.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
36.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
36.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
35.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
35.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
35.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
35.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
34.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
34.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
34.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
33.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
32.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
31.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
31.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
30.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
29.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
29.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
29.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
29.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
28.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
25.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
23.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
23.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
23.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
23.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
22.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
22.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
21.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
20.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
20.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
19.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
19.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
18.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
16.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
16.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
15.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
14.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
13.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
12.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PALM2AKAP2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
115.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
75.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
51.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
44.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
42.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
42.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
37.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
37.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
36.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
36.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
33.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
33.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
31.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
30.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
29.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
28.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
27.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
26.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
26.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
26.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
25.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
25.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
24.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
24.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
24.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
24.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
24.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
24.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
23.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
23.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
23.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
22.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
22.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
22.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
22.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
22.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
21.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
21.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
21.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
21.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
21.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
21.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
20.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
20.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
20.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
20.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
20.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
19.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
19.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
19.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
19.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
18.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
18.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
18.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
18.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
18.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
18.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
17.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
17.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
17.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
17.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
17.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
16.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
16.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
16.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
16.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
16.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
16.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
16.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
16.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
15.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
15.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
15.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
15.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
15.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
15.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
15.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
15.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
15.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
15.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
14.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
14.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
14.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
14.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
14.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
14.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
14.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
14.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
14.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
14.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
14.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
13.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
13.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
13.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
13.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
13.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
13.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
12.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
12.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
12.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
12.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
12.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
12.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
12.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
12.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
11.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
11.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
11.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
11.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
10.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
10.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
10.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
10.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
10.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
10.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
10.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
10.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
10.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
10.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
9.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
9.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
9.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
9.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
9.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
9.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
9.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
9.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
9.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
9.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
9.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
9.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
9.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
9.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
9.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
8.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
8.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
8.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
8.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
8.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
8.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
8.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
8.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
8.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
8.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
8.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
8.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
8.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
8.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
8.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
8.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
8.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
8.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
8.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
8.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
8.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
8.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
8.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
7.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
7.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
7.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
7.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
7.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
7.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
7.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
7.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
7.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
7.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
7.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
6.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
6.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
6.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
6.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
6.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
6.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
6.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
6.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
6.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
6.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
6.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
6.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
6.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
6.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
6.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
5.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
5.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
5.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
5.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
5.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
5.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
5.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
5.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
5.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
5.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
5.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
5.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
5.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
5.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
5.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
5.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
4.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
4.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
4.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
4.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
4.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
4.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
4.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
4.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
4.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
4.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
4.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
4.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
4.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
4.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
4.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
3.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
3.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
3.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
3.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
2.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
2.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
2.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
2.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
