We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
8.3
nTPM
HPA Brain:
58.4
nTPM
GTEx:
8.3
nTPM
FANTOM5:
38.1
Scaled Tags Per Million
Pig:
39.9
nTPM
Mouse:
67.8
nTPM
Allen mouse:
5.4
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
58.4
Sample id
Sample description
nTPM
Amygdala nTPM: 45.8
1987
Female, age 91, left hemisphere
55.5
2517
Female, age 94, left hemisphere
50.6
2514
Male, age 75, right hemisphere
46.4
2695
Female, age 67, right hemisphere
41.8
2814
Male, age 76, right hemisphere
34.8
Basal amygdala nTPM: 58.4
2243
Female, age 91, right hemisphere
73.2
2685
Female, age 94, left hemisphere
65.5
2110
Male, age 80, left hemisphere
64.4
2609
Male, age 75, right hemisphere
52.5
1955
Male, age 76, both hemispheres
52.1
2827
Female, age 67, right hemisphere
42.9
Central amygdala nTPM: 52.3
2239
Male, age 80, left hemisphere
79.1
2826
Female, age 94, left hemisphere
65.9
2515
Male, age 75, right hemisphere
46.0
2701
Female, age 91, right hemisphere
44.4
1905
Male, age 76, both hemispheres
25.8
Corticomedial amygdala nTPM: 51.2
2429
Female, age 94, left hemisphere
65.1
2829
Male, age 80, left hemisphere
59.2
2535
Female, age 67, right hemisphere
51.9
2242
Female, age 91, right hemisphere
46.3
2240
Male, age 76, both hemispheres
44.4
2428
Male, age 75, right hemisphere
40.5
Lateral amygdala nTPM: 57.8
2534
Female, age 94, left hemisphere
81.1
2256
Male, age 80, left hemisphere
70.9
2255
Female, age 91, right hemisphere
57.3
1883
Male, age 76, both hemispheres
53.5
2516
Male, age 75, right hemisphere
45.0
2830
Female, age 67, right hemisphere
39.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
8.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 8.3
Samples: 152
Max nTPM: 58.7
Min nTPM: 0.0
Std nTPM: 7.9
Median nTPM: 6.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
58.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
32.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
32.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
28.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
27.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
24.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
23.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
23.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
22.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
22.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
21.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
20.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
19.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
19.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
18.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
18.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
18.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
17.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
16.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
16.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
16.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
15.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
15.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
14.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
14.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
14.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
14.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
13.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
13.0
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
12.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
12.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
12.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
12.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
12.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
11.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
11.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
11.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
11.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
11.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
11.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
11.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
10.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
10.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
10.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
10.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
10.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
9.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
9.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
9.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
9.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
9.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
8.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
8.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
8.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
8.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
8.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
8.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
8.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
7.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
7.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
7.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
7.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
7.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
7.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
7.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
7.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
7.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
7.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
7.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
6.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
6.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
6.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
6.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
6.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
6.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
6.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
6.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
6.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
6.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
5.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
5.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
5.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
5.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
5.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
5.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
5.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
5.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
5.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
5.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
5.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
5.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
4.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
4.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
4.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
4.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
4.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
4.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
4.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
4.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
4.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
4.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
4.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
3.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
3.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
3.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
3.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
3.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
3.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
3.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
3.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
3.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
3.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
3.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
3.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
3.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
2.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
2.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
2.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
2.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
2.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
2.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
2.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
2.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
2.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
2.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
1.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
1.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
1.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
1.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
1.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
1.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
1.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
1.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
0.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
0.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
0.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
0.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
0.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
0.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
0.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
0.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
0.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
0.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
0.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
0.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
0.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
0.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
0.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
0.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
0.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
0.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
0.0
Show allShow less
AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
67.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 67.8
Samples: 4
Max nTPM: 71.5
Min nTPM: 65.7
Sample A
Male
67.5
Sample B
Male
65.7
Sample C
Female
71.5
Sample D
Female
66.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.