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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC13 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
93.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
209.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
187.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
185.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
180.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
177.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
165.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
165.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
162.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
161.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
144.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
137.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
132.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
131.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
128.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
119.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
113.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
113.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
112.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
110.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
109.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
109.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
101.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
98.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
97.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
95.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
94.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
92.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
87.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
87.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
87.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
85.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
84.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
83.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
82.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
81.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
78.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
76.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
73.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
73.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
73.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
72.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
71.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
70.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
70.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
69.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
62.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
61.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
58.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
58.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
58.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
52.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
52.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
52.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
50.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
50.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
50.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
46.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
45.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
43.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
43.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
41.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
41.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
37.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC13 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
53.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
279.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
260.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
213.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
185.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
154.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
142.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
128.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
127.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
115.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
107.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
106.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
100.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
99.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
99.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
93.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
93.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
92.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
92.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
91.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
91.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
89.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
88.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
86.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
86.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
85.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
85.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
83.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
81.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
81.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
81.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
80.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
80.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
79.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
79.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
79.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
77.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
77.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
76.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
76.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
75.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
75.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
75.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
74.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
74.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
73.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
73.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
73.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
72.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
71.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
71.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
70.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
70.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
70.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
70.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
70.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
70.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
69.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
69.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
69.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
69.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
69.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
69.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
68.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
68.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
68.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
68.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
68.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
68.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
68.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
68.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
68.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
67.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
67.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
67.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
67.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
67.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
66.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
66.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
66.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
66.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
65.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
65.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
65.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
65.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
65.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
65.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
64.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
64.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
64.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
64.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
64.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
64.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
64.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
64.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
64.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
63.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
63.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
63.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
63.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
63.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
63.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
63.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
62.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
62.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
62.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
62.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
62.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
62.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
62.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
62.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
62.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
62.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
62.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
61.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
61.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
61.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
60.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
60.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
60.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
60.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
60.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
60.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
60.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
60.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
60.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
59.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
59.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
59.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
59.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
59.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
59.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
59.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
58.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
58.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
58.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
58.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
58.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
58.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
58.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
57.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
57.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
57.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
57.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
57.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
57.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
57.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
57.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
57.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
57.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
56.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
56.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
56.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
56.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
56.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
56.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
56.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
56.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
56.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
56.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
56.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
56.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
56.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
56.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
55.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
55.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
55.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
55.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
55.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
55.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
55.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
55.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
55.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
55.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
55.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
55.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
54.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
54.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
54.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
54.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
54.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
54.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
54.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
54.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
54.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
54.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
54.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
54.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
54.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
54.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
54.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
54.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
54.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
54.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
54.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
53.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
53.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
53.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
53.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
53.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
53.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
53.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
53.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
53.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
53.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
53.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
53.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
53.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
53.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
53.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
53.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
53.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
53.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
52.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
52.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
52.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
52.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
52.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
52.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
52.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
52.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
52.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
52.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
52.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
52.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
52.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
52.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
51.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
51.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
51.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
51.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
51.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
51.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
51.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
51.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
51.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
51.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
51.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
51.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
51.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
51.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
51.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
51.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
51.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
50.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
50.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
50.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
50.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
50.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
50.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
50.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
50.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
50.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
50.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
50.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
50.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
50.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
50.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
50.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
50.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
50.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
50.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
50.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
50.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
50.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
49.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
49.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
49.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
49.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
49.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
49.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
49.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
49.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
49.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
49.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
49.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
49.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
49.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
49.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
49.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
49.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
48.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
48.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
48.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
48.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
48.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
48.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
48.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
48.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
48.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
48.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
47.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
47.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
47.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
47.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
47.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
47.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
47.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
47.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
47.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
47.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
47.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
47.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
47.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
47.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
47.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
47.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
47.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
46.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
46.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
46.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
46.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
46.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
46.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
46.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
46.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
46.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
46.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
46.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
46.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
45.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
45.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
45.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
45.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
45.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
45.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
45.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
45.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
45.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
45.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
45.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
45.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
45.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
45.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
45.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
44.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
44.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
44.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
44.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
44.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
44.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
44.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
44.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
44.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
44.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
44.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
44.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
44.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
44.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
43.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
43.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
43.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
43.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
43.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
43.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
43.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
43.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
43.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
43.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
43.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
43.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
43.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
43.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
43.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
43.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
43.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
43.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
43.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
43.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
43.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
43.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
43.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
43.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
43.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
42.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
42.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
42.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
42.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
42.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
42.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
42.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
42.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
42.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
42.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
42.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
42.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
42.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
42.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
42.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
42.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
41.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
41.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
41.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
41.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
41.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
41.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
41.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
41.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
41.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
41.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
41.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
41.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
41.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
41.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
41.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
41.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
41.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
41.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
41.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
41.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
41.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
41.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
41.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
40.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
40.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
40.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
40.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
40.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
40.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
40.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
40.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
40.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
39.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
39.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
39.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
39.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
39.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
39.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
39.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
39.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
39.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
39.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
38.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
38.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
38.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
38.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
38.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
38.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
38.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
38.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
38.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
38.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
38.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
38.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
38.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
38.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
38.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
38.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
37.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
37.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
37.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
37.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
37.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
37.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
37.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
37.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
37.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
37.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
37.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
37.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
37.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
37.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
37.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
37.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
37.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
36.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
36.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
36.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
36.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
35.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
35.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
35.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
35.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
34.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
34.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
34.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
34.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
34.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
34.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
34.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
33.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
33.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
33.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
33.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
33.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
33.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
32.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
32.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
32.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
32.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
32.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
32.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
32.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
31.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
31.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
31.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
31.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
31.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
31.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
31.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
30.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
30.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
30.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
30.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
29.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
29.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
29.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
28.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
28.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
28.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
28.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
27.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
27.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
26.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
26.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
26.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
25.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
21.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
19.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
17.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
14.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC13 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
123.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
104.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
88.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
88.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
86.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
69.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
68.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
68.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
66.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
66.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
64.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
64.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
62.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
61.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
60.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
60.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
59.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
58.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
57.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
57.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
56.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
56.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
55.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
54.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
53.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
53.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
52.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
50.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
49.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
49.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
49.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
49.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
48.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
48.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
48.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
47.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
47.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
46.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
46.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
46.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
46.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
46.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
46.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
45.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
45.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
45.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
45.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
44.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
44.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
43.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
43.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
43.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
42.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
42.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
42.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
42.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
42.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
42.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
42.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
42.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
42.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
42.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
42.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
41.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
41.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
41.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
41.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
41.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
40.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
40.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
40.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
40.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
40.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
39.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
39.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
39.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
39.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
38.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
38.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
38.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
38.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
38.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
37.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
37.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
36.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
36.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
36.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
36.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
35.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
34.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
34.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
34.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
31.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
31.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
31.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
30.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
29.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
27.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
25.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC13 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
79.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
171.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
171.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
168.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
165.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
154.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
137.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
134.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
133.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
128.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
127.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
127.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
125.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
125.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
122.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
121.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
121.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
118.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
117.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
117.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
116.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
116.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
116.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
115.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
115.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
114.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
113.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
113.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
113.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
113.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
111.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
111.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
111.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
111.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
110.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
110.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
109.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
109.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
109.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
109.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
108.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
107.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
107.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
107.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
107.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
107.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
106.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
106.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
105.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
105.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
105.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
104.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
104.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
102.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
101.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
101.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
100.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
99.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
98.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
98.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
98.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
97.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
97.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
97.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
96.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
96.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
96.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
95.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
95.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
95.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
94.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
94.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
94.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
94.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
92.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
92.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
92.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
92.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
92.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
92.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
91.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
91.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
90.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
90.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
90.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
90.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
89.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
89.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
89.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
88.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
88.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
88.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
87.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
87.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
87.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
87.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
87.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
87.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
87.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
86.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
86.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
86.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
86.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
86.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
85.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
84.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
84.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
84.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
83.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
83.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
83.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
83.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
83.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
83.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
83.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
82.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
82.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
82.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
82.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
81.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
80.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
80.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
80.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
80.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
79.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
79.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
78.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
78.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
78.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
77.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
77.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
77.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
77.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
77.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
76.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
76.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
76.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
76.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
76.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
76.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
76.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
76.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
76.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
75.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
75.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
75.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
75.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
74.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
74.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
74.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
74.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
74.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
74.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
74.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
74.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
73.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
73.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
72.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
72.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
72.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
72.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
72.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
72.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
72.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
72.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
72.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
72.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
71.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
71.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
70.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
70.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
70.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
70.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
70.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
70.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
70.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
70.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
69.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
69.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
69.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
69.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
68.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
68.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
68.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
68.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
67.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
67.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
67.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
67.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
66.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
66.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
66.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
66.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
66.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
66.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
66.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
66.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
65.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
65.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
65.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
65.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
64.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
64.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
64.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
63.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
63.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
63.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
62.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
62.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
62.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
62.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
61.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
61.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
61.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
61.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
61.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
61.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
61.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
60.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
60.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
60.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
60.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
60.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
58.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
58.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
58.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
58.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
58.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
57.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
57.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
57.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
57.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
57.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
56.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
56.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
56.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
56.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
55.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
55.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
54.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
54.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
53.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
53.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
52.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
52.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
52.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
52.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
51.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
51.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
51.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
50.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
50.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
50.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
50.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
49.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
49.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
48.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
47.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
47.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
46.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
45.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
43.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
42.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
42.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
42.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
41.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
41.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
41.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
39.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
39.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
39.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
37.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
37.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
36.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
36.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
34.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
34.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
33.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
32.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
31.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
31.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
20.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
16.6
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
0.8
CPT0081880003
Tumor
0.6
CPT0023350003
Tumor
0.5
CPT0012180003
Tumor
0.5
CPT0017850003
Tumor
0.4
CPT0002270011
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0075570001
Normal
0.3
CPT0076350001
Normal
0.3
CPT0078800003
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0026420001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0082010001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0078840001
Normal
0.2
CPT0071150004
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0025610001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0078660003
Tumor
0.2
CPT0089480003
Normal
0.2
CPT0000890001
Normal
0.2
CPT0075130003
Tumor
0.2
CPT0086970003
Normal
0.2
CPT0092800003
Normal
0.2
CPT0012290003
Normal
0.2
CPT0007470001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0086890003
Normal
0.2
CPT0025060001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0075170001
Normal
0.2
CPT0085670003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0001260009
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0081620001
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0065450001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0088920001
Normal
0.2
CPT0001540009
Tumor
0.2
CPT0010170001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0065430003
Tumor
0.2
CPT0020130001
Normal
0.2
CPT0077140001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0086370003
Normal
0.1
CPT0006950001
Normal
0.1
CPT0002350011
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0012770003
Normal
0.1
CPT0011410003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0001340003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0088570001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0069160003
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0087050003
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0001270001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0014470001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0006530001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0026410003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0069010001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0012550003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0007870001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0078990003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0079180003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0025880003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0065810003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0001220008
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0063630003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0025290003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0092730003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0078930003
Tumor
-0.3
CPT0021240003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0019990003
Tumor
-0.3
CPT0014160003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0015810003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0089460004
Tumor
-0.4
CPT0006630003
Tumor
-0.4
CPT0007860003
Tumor
-0.4
CPT0001500009
Tumor
-0.4
CPT0015730003
Tumor
-0.5
CPT0092290003
Tumor
-0.5
CPT0065750003
Tumor
-0.5
CPT0086030003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.