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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL30 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4092.8
Number of samples
349
Samples
Sample
Description
TPM
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
19355.4
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
13457.3
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
13021.5
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
12513.9
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
10821.1
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
10043.3
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
9668.6
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
8924.9
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
8542.1
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
8460.6
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
8437.0
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
8382.1
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
8306.2
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
8153.0
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
8126.6
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
8113.4
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
7912.3
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
7844.0
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
7681.1
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
7566.4
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
7197.8
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
7170.2
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
7157.1
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
7126.4
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
7006.9
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
6963.2
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
6942.8
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
6857.9
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
6671.8
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
6550.4
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
6517.4
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
6506.9
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
6475.9
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
6391.6
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
6350.4
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
6319.6
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
6315.0
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
6264.8
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
6241.0
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
6224.2
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
6196.8
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
6162.1
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
6146.2
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
6119.0
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
6110.9
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
5952.4
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
5893.5
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
5825.2
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
5816.7
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
5806.5
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
5758.8
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
5738.0
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
5726.6
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
5701.6
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
5643.3
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
5629.4
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
5624.8
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
5623.5
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
5567.1
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
5532.0
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
5501.9
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
5500.8
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
5479.3
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
5453.9
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
5440.3
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
5429.8
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
5428.8
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
5409.7
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
5369.6
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
5331.1
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
5309.9
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
5300.2
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
5286.0
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
5264.8
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
5252.0
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
5247.0
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
5190.0
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
5155.3
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
5149.1
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
5131.2
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
5114.1
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
5108.0
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
5101.3
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
5100.1
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
5041.9
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
5029.5
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
5021.2
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
4949.6
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
4940.1
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
4908.6
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
4881.7
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
4860.0
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
4849.7
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
4844.9
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
4844.8
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
4804.8
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
4800.5
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
4761.9
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
4760.3
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
4759.0
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
4748.9
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
4744.0
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
4719.9
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
4688.8
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
4686.9
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
4672.0
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
4657.5
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
4649.8
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
4642.7
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
4630.2
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
4614.1
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
4613.5
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
4559.4
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
4547.0
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
4543.3
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
4535.8
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
4533.5
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
4502.8
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
4455.3
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
4446.2
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
4426.3
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
4423.9
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
4376.5
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
4343.0
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
4325.6
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
4311.0
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
4299.8
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
4284.4
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
4272.8
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
4266.1
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
4260.9
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
4255.6
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
4241.8
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
4241.6
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
4239.6
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
4200.6
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
4197.7
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
4192.7
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
4182.1
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
4181.4
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
4180.2
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
4160.6
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
4151.3
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
4121.3
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
4085.6
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
4084.5
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
4077.9
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
4065.9
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
4065.6
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
4064.3
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
4060.9
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
4060.0
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
4051.1
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
4048.4
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
4045.4
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
4041.1
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
4038.7
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
3991.6
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
3978.9
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
3966.1
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
3923.3
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
3911.6
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
3893.6
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
3875.0
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
3863.8
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
3847.3
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
3830.8
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
3827.2
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
3826.9
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
3824.7
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
3814.1
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
3813.5
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
3782.1
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
3778.9
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
3754.9
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
3734.2
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
3733.2
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
3709.2
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
3708.1
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
3654.8
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
3652.4
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
3639.0
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
3635.4
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
3596.5
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
3579.7
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
3563.7
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
3539.2
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
3520.9
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
3499.7
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
3461.6
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
3457.6
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
3451.3
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
3447.8
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
3406.8
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
3405.9
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
3404.9
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
3402.2
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
3397.2
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
3391.4
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
3384.8
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
3384.0
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
3376.4
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
3366.1
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
3365.0
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
3359.6
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
3357.2
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
3342.3
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
3341.4
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
3340.3
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
3326.7
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
3319.9
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
3316.0
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
3314.2
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
3300.5
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
3292.2
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
3285.4
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
3283.2
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
3283.2
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
3282.0
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
3252.7
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
3251.8
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
3240.8
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
3229.5
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
3218.7
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
3203.9
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
3189.6
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
3187.3
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
3154.1
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
3153.0
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
3135.5
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
3133.9
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
3126.2
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
3091.3
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
3072.6
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
3068.7
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
3065.7
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
3019.6
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
3013.8
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
2999.0
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
2993.7
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
2987.5
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
2983.5
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
2971.7
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
2952.6
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
2950.6
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
2927.7
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
2922.7
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
2905.1
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
2901.3
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
2899.2
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
2885.5
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
2877.9
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
2876.4
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
2847.8
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
2831.6
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
2791.7
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
2775.3
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
2767.5
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
2756.4
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
2743.3
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
2719.2
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
2713.1
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
2679.5
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
2678.0
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
2677.6
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
2649.9
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
2622.8
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
2612.1
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
2605.5
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
2604.1
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
2584.9
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
2580.6
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
2576.9
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
2554.4
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
2527.5
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
2515.1
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
2494.6
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
2484.8
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
2471.3
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
2439.3
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
2431.8
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
2411.4
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
2406.8
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
2393.0
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
2382.6
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
2331.7
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
2320.0
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
2310.0
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
2292.9
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
2275.6
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
2263.4
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
2250.0
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
2236.3
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
2231.2
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
2219.9
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
2217.3
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
2215.7
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
2191.8
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
2185.0
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
2173.0
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
2172.1
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
2170.9
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
2138.4
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
2133.3
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
2127.1
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
2106.6
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
2095.0
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
2094.1
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
2089.7
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
2072.9
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
2071.1
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
2020.1
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
2016.4
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
2015.5
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
2006.8
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1969.5
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
1962.6
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
1961.9
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
1956.4
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
1921.1
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
1907.9
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
1898.0
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
1872.9
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
1871.0
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
1869.9
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
1862.7
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
1855.6
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
1851.9
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
1848.5
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
1824.5
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
1806.4
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
1791.0
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
1767.5
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
1701.1
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
1688.7
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
1678.2
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
1673.2
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
1665.5
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
1649.4
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
1633.5
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
1585.3
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
1464.2
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
1462.4
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
1443.6
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
1435.8
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
1418.4
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1347.4
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
1023.4
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL30 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4261.0
Number of samples
81
Samples
Sample
Description
TPM
DO46392
0 years, female, NA, stage:III, dead, 628 days
10554.5
DO46342
0 years, female, NA, stage:III, dead, 1398 days
9972.0
DO46380
0 years, female, NA, stage:III, dead, 1423 days
9717.1
DO46333
0 years, female, NA, stage:III, dead, 359 days
8028.9
DO46331
0 years, female, NA, stage:III, dead, 612 days
7728.8
DO46576
0 years, female, NA, stage:III, alive, 133 days
7623.2
DO46568
0 years, female, NA, stage:III, dead, 320 days
7572.8
DO46366
0 years, female, NA, stage:III, dead, 2054 days
7484.9
DO46390
0 years, female, NA, stage:III, dead, 374 days
7411.4
DO46356
0 years, female, NA, stage:III, dead, 911 days
7345.0
DO46586
0 years, female, NA, stage:III, dead, 1019 days
6580.3
DO46453
0 years, female, NA, stage:III, dead, 3294 days
6572.4
DO46388
0 years, female, NA, stage:III, dead, 413 days
6547.8
DO46551
0 years, female, NA, stage:III, dead, 1055 days
6174.7
DO46384
0 years, female, NA, stage:III, dead, 614 days
5987.6
DO46386
0 years, female, NA, stage:III, dead, 1162 days
5949.1
DO46518
0 years, female, NA, stage:III, alive, 2960 days
5892.3
DO46463
0 years, female, NA, stage:III, dead, 2451 days
5838.5
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
5836.5
DO46493
0 years, female, NA, stage:IV, alive, 839 days
5692.3
DO46372
0 years, female, NA, stage:III, dead, 1326 days
5589.3
DO46398
0 years, female, NA, stage:III, alive, 437 days
5066.9
DO46408
0 years, female, NA, stage:III, dead, 489 days
4986.5
DO46591
0 years, female, NA, stage:III, dead, 195 days
4978.2
DO46402
0 years, female, NA, stage:III, dead, 511 days
4953.7
DO46338
0 years, female, NA, stage:III, dead, 596 days
4897.3
DO46566
0 years, female, NA, stage:III, dead, 673 days
4811.5
DO46325
0 years, female, NA, stage:III, dead, 477 days
4694.4
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
4684.6
DO46334
0 years, female, NA, stage:III, dead, 496 days
4562.6
DO46370
0 years, female, NA, stage:III, dead, 1727 days
4354.3
DO46400
0 years, female, NA, stage:III, dead, 719 days
4248.6
DO46581
0 years, female, NA, stage:III, dead, 408 days
4231.7
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
4133.7
DO46374
0 years, female, NA, stage:III, dead, 1409 days
4041.7
DO46344
0 years, female, NA, stage:III, dead, 642 days
3989.6
DO46354
0 years, female, NA, stage:III, dead, 843 days
3972.7
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
3890.6
DO46352
0 years, female, NA, stage:III, dead, 677 days
3867.6
DO46340
0 years, female, NA, stage:III, dead, 616 days
3842.5
DO46443
0 years, female, NA, stage:III, dead, 2464 days
3726.4
DO46528
0 years, female, NA, stage:III, alive, 6139 days
3599.5
DO46346
0 years, female, NA, stage:III, dead, 1187 days
3587.6
DO46436
0 years, female, NA, stage:III, alive, 3193 days
3577.4
DO46538
0 years, female, NA, stage:III, dead, 1527 days
3499.3
DO46412
0 years, female, NA, stage:III, dead, 597 days
3461.4
DO46611
0 years, female, NA, stage:III, dead, 734 days
3457.1
DO46432
0 years, female, NA, stage:III, alive, 2218 days
3419.7
DO46597
0 years, female, NA, stage:III, dead, 393 days
3387.5
DO46364
0 years, female, NA, stage:III, dead, 806 days
3379.4
DO46546
0 years, female, NA, stage:III, dead, 1889 days
3242.5
DO46404
0 years, female, NA, stage:III, dead, 690 days
3095.3
DO46508
0 years, female, NA, stage:III, dead, 2101 days
3062.5
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
3016.4
DO46329
0 years, female, NA, stage:III, dead, 1699 days
2980.4
DO46326
0 years, female, NA, stage:III, dead, 701 days
2958.8
DO46378
0 years, female, NA, stage:III, alive, 843 days
2869.8
DO46448
0 years, female, NA, stage:III, dead, 654 days
2823.2
DO46327
0 years, female, NA, stage:III, dead, 184 days
2722.3
DO46533
0 years, female, NA, stage:III, alive, 3667 days
2711.2
DO46328
0 years, female, NA, stage:III, dead, 972 days
2693.1
DO46330
0 years, female, NA, stage:III, dead, 684 days
2581.1
DO46358
0 years, female, NA, stage:III, dead, 423 days
2573.4
DO46602
0 years, female, NA, stage:III, dead, 205 days
2531.3
DO46571
0 years, female, NA, stage:III, dead, 243 days
2530.4
DO46376
0 years, female, NA, stage:III, dead, 1430 days
2479.5
DO46368
0 years, female, NA, stage:III, dead, 2879 days
2476.2
DO46348
0 years, female, NA, stage:IV, dead, 287 days
2472.9
DO46396
0 years, female, NA, stage:III, dead, 583 days
2402.7
DO46560
0 years, female, NA, stage:IV, dead, 286 days
2360.4
DO46332
0 years, female, NA, stage:III, dead, 689 days
2350.5
DO46350
0 years, female, NA, stage:III, dead, 886 days
2292.0
DO46606
0 years, female, NA, stage:III, alive, 804 days
2108.4
DO46468
0 years, female, NA, stage:III, alive, 2776 days
1971.0
DO46336
0 years, female, NA, stage:IV, dead, 664 days
1941.4
DO46561
0 years, female, NA, stage:III, dead, 195 days
1926.0
DO46362
0 years, female, NA, stage:III, dead, 1639 days
1921.0
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
1759.3
DO46588
0 years, female, NA, stage:III, dead, 438 days
1732.8
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
1642.8
DO46382
0 years, female, NA, stage:IV, dead, 311 days
1514.7
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
0.3
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.3
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.2
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.2
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.1
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
0.1
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.1
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
0.1
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.1
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.1
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.1
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.1
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
0.1
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.0
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.0
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
0.0
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
0.0
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
0.0
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.0
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.0
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-0.1
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-0.1
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-0.1
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-0.1
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-0.1
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-0.1
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-0.1
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-0.2
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
-0.2
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-0.2
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-0.2
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-0.2
285fed94-1495-448e-879b-b55de9_D2
Tumor
-0.2
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-0.3
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
-0.3
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
-0.3
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
-0.3
e9d416e7-f661-400a-896e-388545_D2
Tumor
-0.3
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-0.3
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
-0.3
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.3
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.3
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-0.3
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-0.3
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-0.3
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-0.3
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.3
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.4
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
-0.4
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
-0.4
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
-0.4
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-0.4
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
-0.4
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-0.4
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-0.4
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-0.4
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
-0.5
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-0.5
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.5
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-0.5
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-0.5
15524912-685a-47ce-a824-567848_D2
Tumor
-0.5
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-0.5
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.6
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
-0.6
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-0.6
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.6
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-0.6
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.6
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.6
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-0.6
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-0.6
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-0.7
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.7
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.7
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-0.7
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
-0.7
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-0.7
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.7
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-0.8
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-0.8
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-0.8
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-0.8
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
-0.8
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-0.8
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-0.9
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.9
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-0.9
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-0.9
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.9
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.9
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
-0.9
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-0.9
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.9
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-0.9
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-1.0
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-1.0
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-1.0
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-1.0
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-1.0
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-1.0
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-1.0
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-1.0
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-1.1
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-1.1
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-1.1
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-1.1
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-1.3
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.