HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:29.8 nTPM
HPA Brain:23.2 nTPM
GTEx:29.8 nTPM
FANTOM5:17.3 Scaled Tags Per Million
Pig:1.7 nTPM
Mouse:0.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 23.2
Sample id Sample description nTPM
Hippocampus
nTPM: 21.8
1911 Female, age 85, right hemisphere 39.1
2621 Female, age 67, right hemisphere 38.6
2529 Female, age 94, left hemisphere 17.5
1855 Male, age 76, left hemisphere 14.1
1898 Male, age 80, left hemisphere 10.9
2148 Female, age 91, left hemisphere 10.4
Dentate gyrus
nTPM: 14.8
1927 Female, age 91, both hemispheres 29.6
2246 Female, age 85, both hemispheres 23.8
2010 Male, age 76, both hemispheres 20.5
2531 Female, age 67, both hemispheres 7.1
2528 Male, age 74, both hemispheres 4.6
2530 Female, age 94, left hemisphere 3.4
Entorhinal gyrus
nTPM: 8.9
1938 Female, age 85, left hemisphere 15.2
2117 Female, age 91, right hemisphere 14.7
1787 Male, age 76, left hemisphere 9.0
2686 Male, age 75, right hemisphere 6.6
2764 Male, age 80, right hemisphere 6.5
2613 Female, age 94, left hemisphere 1.7
Hippocampus, CA1
nTPM: 23.2
2749 Male, age 80, left hemisphere 42.7
2527 Male, age 74, both hemispheres 28.4
1873 Female, age 85, both hemispheres 21.4
2082 Female, age 91, right hemisphere 14.1
2045 Male, age 76, both hemispheres 9.5
Hippocampus, CA2
nTPM: 19.3
2249 Male, age 74, both hemispheres 35.0
1892 Male, age 76, both hemispheres 26.2
1940 Female, age 85, left hemisphere 19.6
1963 Male, age 80, left hemisphere 16.2
2113 Female, age 91, right hemisphere 11.6
2437 Female, age 94, left hemisphere 7.3
Hippocampus, CA3
nTPM: 19.5
2137 Male, age 80, left hemisphere 35.5
2436 Male, age 74, both hemispheres 33.7
1867 Male, age 76, both hemispheres 22.4
1891 Female, age 85, both hemispheres 13.3
2861 Female, age 67, both hemispheres 10.7
2620 Female, age 94, left hemisphere 1.3
Parahippocampal cortex
nTPM: 17.6
2250 Female, age 67, right hemisphere 35.8
2693 Female, age 94, both hemispheres 24.4
2245 Female, age 91, both hemispheres 23.6
1933 Female, age 85, both hemispheres 22.9
2532 Female, age 72, left hemisphere 20.8
2622 Female, age 67, right hemisphere 15.5
2018 Male, age 76, both hemispheres 9.8
1850 Male, age 80, both hemispheres 7.7
2692 Male, age 74, both hemispheres 7.6
1990 Female, age 91, right hemisphere 7.5
Perirhinal gyrus
nTPM: 22.8
1841 Female, age 85, right hemisphere 38.9
2521 Female, age 94, right hemisphere 31.0
1794 Male, age 80, right hemisphere 18.2
1847 Female, age 91, left hemisphere 17.4
2848 Male, age 76, right hemisphere 8.7
Subiculum
nTPM: 12.7
2042 Male, age 76, both hemispheres 17.6
1901 Male, age 80, both hemispheres 16.3
1977 Female, age 85, both hemispheres 16.1
2619 Male, age 74, both hemispheres 14.1
2438 Female, age 94, left hemisphere 7.7
2729 Female, age 91, right hemisphere 4.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 29.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.8
Samples: 197

Max nTPM: 169.7
Min nTPM: 0.8
Std nTPM: 28.4
Median nTPM: 19.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 169.7
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 138.4
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 124.4
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 120.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 108.0
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 104.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 86.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 84.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 80.9
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 80.8
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 80.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 17.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.3
FF:10169-103B7 60 years, female 18.6
FF:10153-102I9 76 years, female 15.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 1.7
Pig sample Sample description nTPM
Subiculum
nTPM: 1.7
Samples: 4

Max nTPM: 1.9
Min nTPM: 1.4
Sample A Female 1.8
Sample B Female 1.4
Sample C Male 1.9
Sample D Male 1.8
Dorsal hippocampus
nTPM: 1.0
Samples: 4

Max nTPM: 1.2
Min nTPM: 0.7
Sample A Female 0.7
Sample B Female 0.9
Sample C Male 1.2
Sample D Male 1.2
Entorhinal cortex
nTPM: 1.2
Samples: 4

Max nTPM: 1.3
Min nTPM: 1.1
Sample A Female 1.3
Sample B Female 1.1
Sample C Male 1.1
Sample D Male 1.3
Ventral hippocampus
nTPM: 1.3
Samples: 4

Max nTPM: 1.7
Min nTPM: 1.2
Sample A Female 1.2
Sample B Female 1.2
Sample C Male 1.7
Sample D Male 1.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 0.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.8
Samples: 4

Max nTPM: 2.0
Min nTPM: 0.1
Sample A Male 0.1
Sample B Male 0.8
Sample C Female 0.3
Sample D Female 2.0
Hippocampal formation
nTPM: 0.7
Samples: 4

Max nTPM: 0.8
Min nTPM: 0.7
Sample A Male 0.8
Sample B Male 0.7
Sample C Female 0.7
Sample D Female 0.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
79749606 Antisense, RP_071204_02_D08, Mouse strain C57BL/6J (56 days, male) 0.1
1111 Antisense, RP_Baylor_103147, Mouse strain C57BL/6J (56 days, male) 0.0
1112 Antisense, RP_Baylor_103147, Mouse strain C57BL/6J (56 days, male) 0.0
74511885 Antisense, RP_060117_02_C08, Mouse strain C57BL/6J (56 days, male) 0.0

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