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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
58.3
nTPM
HPA Brain:
33.0
nTPM
GTEx:
58.3
nTPM
FANTOM5:
64.9
Scaled Tags Per Million
Pig:
24.4
nTPM
Mouse:
88.0
nTPM
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
33.0
Sample id
Sample description
nTPM
Amygdala nTPM: 33.0
2814
Male, age 76, right hemisphere
42.4
2514
Male, age 75, right hemisphere
35.0
2695
Female, age 67, right hemisphere
32.8
1987
Female, age 91, left hemisphere
30.6
2517
Female, age 94, left hemisphere
24.3
Basal amygdala nTPM: 24.1
1955
Male, age 76, both hemispheres
28.3
2609
Male, age 75, right hemisphere
27.7
2110
Male, age 80, left hemisphere
26.1
2685
Female, age 94, left hemisphere
24.2
2827
Female, age 67, right hemisphere
21.0
2243
Female, age 91, right hemisphere
17.4
Central amygdala nTPM: 28.4
1905
Male, age 76, both hemispheres
36.8
2515
Male, age 75, right hemisphere
31.1
2826
Female, age 94, left hemisphere
28.5
2239
Male, age 80, left hemisphere
24.8
2701
Female, age 91, right hemisphere
20.6
Corticomedial amygdala nTPM: 25.6
2428
Male, age 75, right hemisphere
32.7
2829
Male, age 80, left hemisphere
30.3
2240
Male, age 76, both hemispheres
27.3
2429
Female, age 94, left hemisphere
27.2
2242
Female, age 91, right hemisphere
20.5
2535
Female, age 67, right hemisphere
15.7
Lateral amygdala nTPM: 25.9
1883
Male, age 76, both hemispheres
37.9
2516
Male, age 75, right hemisphere
32.7
2534
Female, age 94, left hemisphere
26.2
2830
Female, age 67, right hemisphere
21.5
2256
Male, age 80, left hemisphere
20.5
2255
Female, age 91, right hemisphere
16.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
58.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 58.3
Samples: 152
Max nTPM: 159.5
Min nTPM: 27.6
Std nTPM: 16.9
Median nTPM: 54.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
159.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
113.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
112.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
107.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
105.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
99.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
96.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
95.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
93.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
92.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
89.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
85.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
83.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
76.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
75.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
74.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
74.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
73.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
72.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
69.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
69.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
68.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
67.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
67.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
66.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
66.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
66.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
65.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
65.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
65.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
64.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
63.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
63.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
63.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
63.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
62.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
62.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
62.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
62.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
62.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
62.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
61.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
61.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
61.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
61.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
61.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
61.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
60.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
60.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
60.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
60.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
60.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
59.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
59.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
59.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
59.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
58.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
58.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
57.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
57.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
57.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
57.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
57.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
57.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
57.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
56.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
56.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
56.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
55.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
55.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
55.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
55.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
55.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
55.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
54.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
54.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
54.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
53.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
53.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
53.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
53.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
52.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
52.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
52.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
52.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
52.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
52.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
52.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
52.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
52.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
52.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
51.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
51.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
51.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
51.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
51.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
50.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
50.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
50.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
50.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
50.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
50.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
50.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
49.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
49.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
49.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
49.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
49.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
49.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
49.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
48.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
48.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
48.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
48.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
48.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
48.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
48.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
47.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
47.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
47.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
47.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
47.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
47.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
47.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
47.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
47.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
46.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
46.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
46.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
46.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
46.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
46.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
46.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
45.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
45.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
44.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
44.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
44.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
43.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
43.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
43.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
43.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
43.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
42.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
41.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
40.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
40.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
39.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
38.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
34.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
33.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
27.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.