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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDIA4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
133.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
101.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
100.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
99.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
79.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
71.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
67.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
59.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
59.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
56.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
49.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
47.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
47.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
47.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
45.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
45.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
44.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
43.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
43.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
42.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
41.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
41.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
41.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
40.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
40.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
39.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
39.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
39.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
39.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
39.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
38.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
38.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
37.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
36.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
35.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
35.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
33.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
33.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
32.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
32.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
31.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
30.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
30.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
30.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
28.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
27.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
26.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
26.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
26.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
25.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
22.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
21.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
21.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
20.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
20.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
20.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
18.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
18.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
17.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
16.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
15.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
14.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
13.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDIA4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
97.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
710.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
586.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
403.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
381.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
368.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
354.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
346.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
313.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
308.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
307.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
302.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
287.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
266.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
260.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
252.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
248.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
244.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
243.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
241.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
238.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
237.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
235.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
234.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
231.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
226.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
220.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
219.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
216.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
210.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
207.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
206.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
199.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
196.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
195.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
194.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
193.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
190.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
187.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
185.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
184.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
183.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
179.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
175.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
172.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
168.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
166.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
166.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
165.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
165.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
164.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
160.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
159.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
157.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
153.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
151.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
150.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
148.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
147.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
146.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
146.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
146.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
145.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
143.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
141.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
140.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
140.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
139.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
139.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
139.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
139.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
138.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
136.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
135.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
135.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
134.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
133.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
133.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
130.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
129.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
129.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
129.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
128.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
128.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
128.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
128.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
127.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
127.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
126.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
126.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
126.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
126.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
125.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
125.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
124.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
123.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
123.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
123.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
121.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
120.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
119.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
119.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
119.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
119.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
119.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
119.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
118.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
118.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
118.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
117.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
117.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
117.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
115.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
115.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
114.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
114.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
114.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
114.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
113.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
113.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
113.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
112.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
112.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
111.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
111.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
111.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
111.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
111.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
110.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
110.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
110.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
110.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
110.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
109.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
109.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
109.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
108.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
108.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
108.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
108.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
107.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
107.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
106.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
106.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
105.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
105.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
105.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
105.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
105.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
104.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
104.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
104.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
104.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
104.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
103.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
103.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
103.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
103.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
102.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
102.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
102.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
102.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
101.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
101.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
100.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
100.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
100.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
100.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
100.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
100.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
99.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
99.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
99.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
99.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
99.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
98.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
98.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
98.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
98.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
98.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
98.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
97.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
97.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
97.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
97.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
97.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
96.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
96.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
96.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
96.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
95.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
95.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
95.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
95.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
95.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
94.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
94.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
94.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
94.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
94.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
94.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
94.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
94.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
93.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
93.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
92.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
92.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
92.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
92.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
91.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
91.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
91.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
91.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
91.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
91.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
91.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
90.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
90.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
90.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
90.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
90.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
89.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
89.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
89.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
89.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
88.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
88.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
88.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
88.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
88.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
88.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
88.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
87.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
87.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
87.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
87.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
87.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
87.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
87.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
86.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
86.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
86.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
86.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
86.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
86.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
86.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
86.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
86.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
85.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
85.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
85.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
85.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
85.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
85.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
85.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
85.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
84.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
84.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
84.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
84.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
84.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
83.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
83.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
83.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
83.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
83.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
83.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
82.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
82.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
82.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
82.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
82.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
81.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
81.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
81.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
81.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
81.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
81.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
81.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
81.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
80.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
80.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
80.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
80.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
80.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
80.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
80.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
79.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
79.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
79.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
79.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
79.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
78.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
78.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
78.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
78.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
78.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
78.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
78.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
78.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
78.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
78.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
78.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
77.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
77.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
77.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
77.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
77.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
77.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
76.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
76.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
76.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
76.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
76.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
76.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
76.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
76.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
76.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
76.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
75.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
75.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
75.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
75.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
75.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
75.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
74.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
74.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
74.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
74.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
74.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
74.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
74.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
74.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
73.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
73.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
73.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
73.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
73.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
73.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
73.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
73.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
73.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
73.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
73.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
72.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
72.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
72.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
72.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
72.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
71.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
71.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
71.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
71.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
70.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
70.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
70.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
70.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
70.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
70.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
70.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
70.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
70.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
70.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
70.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
69.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
69.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
69.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
69.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
69.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
68.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
68.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
68.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
68.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
68.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
67.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
67.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
67.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
67.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
67.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
67.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
67.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
66.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
66.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
66.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
66.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
66.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
66.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
65.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
65.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
65.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
65.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
64.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
64.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
64.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
64.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
64.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
64.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
63.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
63.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
62.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
62.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
62.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
62.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
62.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
61.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
61.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
61.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
61.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
61.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
61.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
61.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
60.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
60.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
60.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
60.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
60.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
60.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
60.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
59.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
59.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
58.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
58.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
58.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
57.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
57.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
57.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
57.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
57.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
56.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
56.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
56.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
55.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
55.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
55.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
55.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
55.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
55.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
55.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
54.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
54.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
54.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
52.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
52.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
52.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
52.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
52.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
51.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
51.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
50.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
50.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
50.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
50.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
49.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
49.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
49.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
49.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
49.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
49.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
48.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
48.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
48.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
47.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
46.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
46.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
45.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
45.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
44.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
44.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
44.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
44.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
44.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
44.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
44.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
44.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
43.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
43.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
42.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
42.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
42.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
41.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
39.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
38.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
38.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
38.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
38.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
37.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
37.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
37.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
36.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
36.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
35.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
35.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
35.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
35.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
35.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
34.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
34.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
34.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
32.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
32.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
31.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
31.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
31.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
31.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
30.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
30.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
28.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
26.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
26.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
26.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
25.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
25.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
22.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
22.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
19.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
18.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
17.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
17.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
16.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
14.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
14.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDIA4 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
129.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
583.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
460.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
411.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
362.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
346.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
337.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
286.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
283.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
269.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
236.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
221.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
208.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
206.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
191.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
187.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
185.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
183.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
182.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
180.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
163.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
160.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
158.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
151.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
146.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
138.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
137.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
136.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
132.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
132.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
131.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
130.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
129.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
117.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
116.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
115.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
114.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
114.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
113.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
113.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
111.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
111.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
111.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
110.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
107.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
105.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
103.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
103.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
103.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
103.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
102.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
102.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
102.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
101.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
100.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
99.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
97.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
93.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
92.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
92.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
91.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
90.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
89.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
87.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
86.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
85.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
84.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
83.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
82.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
80.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
79.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
79.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
79.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
78.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
78.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
77.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
75.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
75.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
75.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
74.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
74.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
73.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
72.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
72.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
71.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
69.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
68.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
66.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
66.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
65.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
62.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
58.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
56.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
54.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
53.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
52.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
46.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
42.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
41.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
38.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDIA4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
101.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
495.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
359.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
346.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
318.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
275.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
258.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
246.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
244.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
240.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
229.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
222.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
222.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
220.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
219.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
212.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
211.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
210.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
209.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
207.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
206.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
203.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
197.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
195.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
194.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
186.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
185.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
180.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
177.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
175.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
172.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
169.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
166.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
164.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
162.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
162.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
162.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
161.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
159.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
155.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
155.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
155.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
154.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
152.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
152.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
151.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
150.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
148.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
147.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
146.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
145.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
143.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
143.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
142.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
141.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
139.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
138.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
137.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
136.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
136.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
135.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
135.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
135.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
133.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
132.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
131.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
131.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
130.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
129.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
129.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
126.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
126.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
126.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
126.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
123.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
123.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
122.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
122.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
121.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
120.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
120.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
120.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
120.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
119.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
119.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
118.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
117.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
117.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
117.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
117.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
117.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
116.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
116.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
115.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
113.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
113.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
112.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
111.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
111.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
111.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
111.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
109.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
108.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
108.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
108.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
106.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
105.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
104.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
104.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
103.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
103.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
101.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
100.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
99.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
99.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
99.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
98.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
97.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
97.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
96.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
96.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
96.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
95.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
95.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
94.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
94.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
94.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
94.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
94.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
94.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
93.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
92.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
91.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
91.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
90.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
90.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
90.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
90.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
90.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
89.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
89.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
88.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
88.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
88.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
88.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
86.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
86.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
86.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
86.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
85.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
85.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
85.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
84.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
83.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
83.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
83.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
83.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
83.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
82.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
82.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
82.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
81.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
81.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
80.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
79.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
79.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
79.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
77.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
77.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
77.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
76.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
76.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
75.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
74.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
74.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
73.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
73.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
73.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
73.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
72.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
72.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
70.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
70.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
69.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
68.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
67.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
67.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
67.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
66.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
66.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
63.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
63.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
62.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
62.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
62.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
61.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
61.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
61.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
61.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
60.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
60.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
60.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
60.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
59.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
59.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
58.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
58.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
58.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
58.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
58.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
57.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
57.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
57.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
56.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
56.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
56.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
56.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
56.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
56.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
56.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
56.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
54.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
54.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
53.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
53.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
53.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
52.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
52.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
52.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
52.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
52.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
51.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
50.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
50.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
50.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
49.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
48.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
48.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
48.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
48.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
48.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
47.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
46.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
46.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
46.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
45.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
45.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
44.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
44.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
43.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
43.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
43.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
43.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
42.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
42.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
41.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
39.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
39.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
39.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
37.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
37.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
37.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
37.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
36.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
36.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
35.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
35.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
34.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
33.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
33.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
32.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
32.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
31.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
31.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
29.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
28.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
26.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
25.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
22.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
22.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
22.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
22.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
19.5
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
1.7
CPT0002350011
Tumor
1.6
CPT0001340003
Tumor
1.5
CPT0012180003
Tumor
1.5
CPT0025110003
Tumor
1.5
CPT0023350003
Tumor
1.5
CPT0086950003
Tumor
1.3
CPT0076330003
Tumor
1.2
CPT0012280003
Tumor
1.1
CPT0081880003
Tumor
1.1
CPT0014450004
Tumor
1.0
CPT0011410003
Tumor
1.0
CPT0069160003
Tumor
1.0
CPT0063630003
Tumor
0.9
CPT0084560003
Tumor
0.9
CPT0075130003
Tumor
0.8
CPT0079270003
Tumor
0.7
CPT0088690003
Tumor
0.6
CPT0001180009
Tumor
0.6
CPT0025880003
Tumor
0.5
CPT0078510003
Tumor
0.5
CPT0012550003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0089460004
Tumor
0.4
CPT0089020003
Tumor
0.4
CPT0081600003
Tumor
0.4
CPT0015730003
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0019130003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0017850003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0088630003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0012080003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0092190003
Normal
0.1
CPT0013790003
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0025290003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0025350003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0077310003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0092800003
Normal
-0.2
CPT0078990003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0075570001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0088900003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0023690003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0014350001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0086870003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0079430001
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0014370004
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0024680001
Normal
-0.2
CPT0026410003
Tumor
-0.2
CPT0018250001
Normal
-0.2
CPT0025580004
Tumor
-0.2
CPT0006950001
Normal
-0.2
CPT0065750003
Tumor
-0.2
CPT0000660001
Normal
-0.2
CPT0015910003
Tumor
-0.2
CPT0002270011
Tumor
-0.2
CPT0082010001
Normal
-0.2
CPT0063640001
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0063320003
Tumor
-0.3
CPT0020020001
Normal
-0.3
CPT0010170001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0079480003
Tumor
-0.3
CPT0077140001
Normal
-0.3
CPT0077490003
Tumor
-0.3
CPT0092310003
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0006630003
Tumor
-0.3
CPT0086970003
Normal
-0.3
CPT0092740003
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0079230003
Tumor
-0.3
CPT0077500001
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0001220008
Tumor
-0.3
CPT0001510001
Normal
-0.4
CPT0012770003
Normal
-0.4
CPT0023360001
Normal
-0.4
CPT0078940001
Normal
-0.4
CPT0000790001
Normal
-0.4
CPT0088710001
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0000870016
Tumor
-0.4
CPT0086830003
Normal
-0.4
CPT0014160003
Tumor
-0.4
CPT0088500001
Normal
-0.4
CPT0087050003
Normal
-0.4
CPT0069010001
Normal
-0.4
CPT0020130001
Normal
-0.4
CPT0007470001
Normal
-0.4
CPT0012920003
Normal
-0.4
CPT0064400001
Normal
-0.4
CPT0001540009
Tumor
-0.4
CPT0079000001
Normal
-0.5
CPT0086890003
Normal
-0.5
CPT0002370001
Normal
-0.5
CPT0012640003
Normal
-0.5
CPT0009080003
Normal
-0.5
CPT0000640003
Tumor
-0.5
CPT0088640003
Normal
-0.5
CPT0079300001
Normal
-0.5
CPT0007870001
Normal
-0.5
CPT0025920001
Normal
-0.6
CPT0009020003
Normal
-0.6
CPT0019160001
Normal
-0.6
CPT0088970003
Tumor
-0.6
CPT0079510001
Normal
-0.7
CPT0001230001
Normal
-0.7
CPT0001550001
Normal
-0.7
CPT0078660003
Tumor
-0.8
CPT0079180003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
