HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:8.5 nTPM
HPA Brain:18.0 nTPM
GTEx:8.5 nTPM
FANTOM5:26.4 Scaled Tags Per Million
Pig:9.6 nTPM
Mouse:12.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038944
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 18.0
Sample id Sample description nTPM
Hippocampus
nTPM: 16.8
1911 Female, age 85, right hemisphere 18.8
2529 Female, age 94, left hemisphere 18.3
2148 Female, age 91, left hemisphere 16.6
2621 Female, age 67, right hemisphere 16.4
1855 Male, age 76, left hemisphere 15.7
1898 Male, age 80, left hemisphere 15.0
Dentate gyrus
nTPM: 17.2
2531 Female, age 67, both hemispheres 19.8
2246 Female, age 85, both hemispheres 18.1
2010 Male, age 76, both hemispheres 16.5
1927 Female, age 91, both hemispheres 16.4
2528 Male, age 74, both hemispheres 16.3
2530 Female, age 94, left hemisphere 16.3
Entorhinal gyrus
nTPM: 15.9
1787 Male, age 76, left hemisphere 18.3
2117 Female, age 91, right hemisphere 18.2
2613 Female, age 94, left hemisphere 16.6
2686 Male, age 75, right hemisphere 15.9
1938 Female, age 85, left hemisphere 13.3
2764 Male, age 80, right hemisphere 13.2
Hippocampus, CA1
nTPM: 16.2
2045 Male, age 76, both hemispheres 18.5
2527 Male, age 74, both hemispheres 16.8
1873 Female, age 85, both hemispheres 16.0
2082 Female, age 91, right hemisphere 16.0
2749 Male, age 80, left hemisphere 13.7
Hippocampus, CA2
nTPM: 15.3
1940 Female, age 85, left hemisphere 18.6
2113 Female, age 91, right hemisphere 15.7
1892 Male, age 76, both hemispheres 15.1
2437 Female, age 94, left hemisphere 14.7
1963 Male, age 80, left hemisphere 13.8
2249 Male, age 74, both hemispheres 13.7
Hippocampus, CA3
nTPM: 16.2
2436 Male, age 74, both hemispheres 17.9
1891 Female, age 85, both hemispheres 17.8
1867 Male, age 76, both hemispheres 16.8
2861 Female, age 67, both hemispheres 16.5
2620 Female, age 94, left hemisphere 14.3
2137 Male, age 80, left hemisphere 13.8
Parahippocampal cortex
nTPM: 18.0
2693 Female, age 94, both hemispheres 22.5
2532 Female, age 72, left hemisphere 22.3
1933 Female, age 85, both hemispheres 18.1
2692 Male, age 74, both hemispheres 17.7
2622 Female, age 67, right hemisphere 17.4
2250 Female, age 67, right hemisphere 17.1
2018 Male, age 76, both hemispheres 17.0
1990 Female, age 91, right hemisphere 16.3
1850 Male, age 80, both hemispheres 16.2
2245 Female, age 91, both hemispheres 15.6
Perirhinal gyrus
nTPM: 17.5
2521 Female, age 94, right hemisphere 20.6
1794 Male, age 80, right hemisphere 19.6
2848 Male, age 76, right hemisphere 16.8
1847 Female, age 91, left hemisphere 15.4
1841 Female, age 85, right hemisphere 15.1
Subiculum
nTPM: 17.5
2438 Female, age 94, left hemisphere 21.5
2619 Male, age 74, both hemispheres 19.4
2042 Male, age 76, both hemispheres 18.2
2729 Female, age 91, right hemisphere 15.8
1901 Male, age 80, both hemispheres 15.2
1977 Female, age 85, both hemispheres 14.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 8.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.5
Samples: 197

Max nTPM: 19.7
Min nTPM: 4.5
Std nTPM: 2.1
Median nTPM: 8.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 19.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 16.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 15.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 14.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 14.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 13.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 13.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 13.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 12.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 12.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 12.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 26.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.4
FF:10169-103B7 60 years, female 28.0
FF:10153-102I9 76 years, female 24.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 9.6
Pig sample Sample description nTPM
Subiculum
nTPM: 9.1
Samples: 4

Max nTPM: 9.3
Min nTPM: 8.8
Sample A Female 9.0
Sample B Female 9.3
Sample C Male 8.8
Sample D Male 9.3
Dorsal hippocampus
nTPM: 9.6
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.9
Sample A Female 9.2
Sample B Female 8.9
Sample C Male 9.8
Sample D Male 10.3
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 9.9
Min nTPM: 8.2
Sample A Female 8.7
Sample B Female 9.9
Sample C Male 8.2
Sample D Male 9.0
Ventral hippocampus
nTPM: 8.6
Samples: 4

Max nTPM: 9.5
Min nTPM: 7.2
Sample A Female 9.5
Sample B Female 9.2
Sample C Male 7.2
Sample D Male 8.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 12.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 13.1
Min nTPM: 10.9
Sample A Male 10.9
Sample B Male 13.1
Sample C Female 13.1
Sample D Female 12.1
Hippocampal formation
nTPM: 12.8
Samples: 4

Max nTPM: 15.3
Min nTPM: 11.6
Sample A Male 15.3
Sample B Male 11.6
Sample C Female 12.5
Sample D Female 11.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71724475 Antisense, RP_050927_03_F12, Mouse strain C57BL/6J (56 days, male) 0.1

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