HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:13.5 nTPM
HPA Brain:19.5 nTPM
GTEx:13.5 nTPM
FANTOM5:122.9 Scaled Tags Per Million
Pig:14.3 nTPM
Mouse:42.4 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014591
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 19.5
Sample id Sample description nTPM
Hippocampus
nTPM: 16.8
1911 Female, age 85, right hemisphere 20.6
1898 Male, age 80, left hemisphere 19.0
1855 Male, age 76, left hemisphere 17.4
2529 Female, age 94, left hemisphere 15.1
2621 Female, age 67, right hemisphere 14.4
2148 Female, age 91, left hemisphere 14.1
Dentate gyrus
nTPM: 15.4
1927 Female, age 91, both hemispheres 18.7
2528 Male, age 74, both hemispheres 17.2
2010 Male, age 76, both hemispheres 17.1
2530 Female, age 94, left hemisphere 14.8
2246 Female, age 85, both hemispheres 13.9
2531 Female, age 67, both hemispheres 10.6
Entorhinal gyrus
nTPM: 15.1
1938 Female, age 85, left hemisphere 19.0
2117 Female, age 91, right hemisphere 17.1
1787 Male, age 76, left hemisphere 14.7
2764 Male, age 80, right hemisphere 14.4
2686 Male, age 75, right hemisphere 14.1
2613 Female, age 94, left hemisphere 11.2
Hippocampus, CA1
nTPM: 19.5
1873 Female, age 85, both hemispheres 23.1
2082 Female, age 91, right hemisphere 22.2
2749 Male, age 80, left hemisphere 21.3
2527 Male, age 74, both hemispheres 15.6
2045 Male, age 76, both hemispheres 15.2
Hippocampus, CA2
nTPM: 18.8
1963 Male, age 80, left hemisphere 23.0
1892 Male, age 76, both hemispheres 21.4
2249 Male, age 74, both hemispheres 20.7
2113 Female, age 91, right hemisphere 19.6
1940 Female, age 85, left hemisphere 17.5
2437 Female, age 94, left hemisphere 10.7
Hippocampus, CA3
nTPM: 16.2
1891 Female, age 85, both hemispheres 22.6
1867 Male, age 76, both hemispheres 20.8
2436 Male, age 74, both hemispheres 17.2
2137 Male, age 80, left hemisphere 15.6
2620 Female, age 94, left hemisphere 12.3
2861 Female, age 67, both hemispheres 8.6
Parahippocampal cortex
nTPM: 16.5
1850 Male, age 80, both hemispheres 21.5
2693 Female, age 94, both hemispheres 19.4
2250 Female, age 67, right hemisphere 18.6
1933 Female, age 85, both hemispheres 18.5
1990 Female, age 91, right hemisphere 16.9
2018 Male, age 76, both hemispheres 16.4
2532 Female, age 72, left hemisphere 15.4
2692 Male, age 74, both hemispheres 14.2
2245 Female, age 91, both hemispheres 13.2
2622 Female, age 67, right hemisphere 11.3
Perirhinal gyrus
nTPM: 19.3
1847 Female, age 91, left hemisphere 23.2
1794 Male, age 80, right hemisphere 20.9
1841 Female, age 85, right hemisphere 20.5
2521 Female, age 94, right hemisphere 16.6
2848 Male, age 76, right hemisphere 15.2
Subiculum
nTPM: 16.6
1901 Male, age 80, both hemispheres 20.4
1977 Female, age 85, both hemispheres 18.2
2438 Female, age 94, left hemisphere 17.3
2042 Male, age 76, both hemispheres 15.8
2729 Female, age 91, right hemisphere 15.4
2619 Male, age 74, both hemispheres 12.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 13.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.5
Samples: 197

Max nTPM: 26.3
Min nTPM: 6.3
Std nTPM: 3.7
Median nTPM: 12.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 26.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 23.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 22.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 22.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 22.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 22.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 22.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 22.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 21.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 21.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 20.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 122.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 122.9
FF:10169-103B7 60 years, female 124.6
FF:10153-102I9 76 years, female 121.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 14.3
Pig sample Sample description nTPM
Subiculum
nTPM: 14.0
Samples: 4

Max nTPM: 16.6
Min nTPM: 12.9
Sample A Female 16.6
Sample B Female 13.0
Sample C Male 13.4
Sample D Male 12.9
Dorsal hippocampus
nTPM: 14.4
Samples: 4

Max nTPM: 15.9
Min nTPM: 12.2
Sample A Female 15.9
Sample B Female 14.6
Sample C Male 14.7
Sample D Male 12.2
Entorhinal cortex
nTPM: 14.2
Samples: 4

Max nTPM: 16.3
Min nTPM: 11.9
Sample A Female 13.8
Sample B Female 16.3
Sample C Male 11.9
Sample D Male 14.6
Ventral hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 15.5
Min nTPM: 11.6
Sample A Female 15.3
Sample B Female 11.6
Sample C Male 14.0
Sample D Male 15.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 42.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.1
Samples: 4

Max nTPM: 41.4
Min nTPM: 34.5
Sample A Male 41.4
Sample B Male 40.3
Sample C Female 40.3
Sample D Female 34.5
Hippocampal formation
nTPM: 42.4
Samples: 4

Max nTPM: 44.2
Min nTPM: 40.2
Sample A Male 44.2
Sample B Male 42.2
Sample C Female 40.2
Sample D Female 42.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
71610880 Antisense, RP_050927_02_A10, Mouse strain C57BL/6J (56 days, male) 2.2

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