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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
XPC is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
56.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
36.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
33.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
27.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
27.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
26.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
24.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
23.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
22.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
21.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
21.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
21.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
20.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
20.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
20.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
20.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
18.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
17.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
17.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
15.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
15.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
14.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
14.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
14.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
14.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
14.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
13.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
13.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
13.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
13.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
13.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
12.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
11.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
9.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
9.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
9.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
9.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
9.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
8.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
8.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
8.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
8.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
6.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
5.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
4.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
3.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
2.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
XPC is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
58.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
41.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
41.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
41.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
41.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
40.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
39.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
38.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
37.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
36.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
36.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
36.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
36.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
36.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
35.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
35.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
34.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
34.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
33.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
32.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
32.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
31.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
31.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
31.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
31.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
31.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
31.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
31.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
31.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
30.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
30.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
30.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
30.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
29.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
29.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
28.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
28.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
28.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
28.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
28.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
28.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
28.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
27.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
27.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
27.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
27.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
27.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
27.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
26.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
26.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
26.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
26.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
26.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
26.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
26.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
26.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
26.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
26.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
26.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
26.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
26.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
26.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
25.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
25.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
25.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
25.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
25.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
25.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
25.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
25.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
25.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
25.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
25.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
24.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
24.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
24.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
24.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
24.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
24.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
24.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
24.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
24.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
24.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
24.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
24.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
24.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
24.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
24.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
24.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
24.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
24.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
24.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
24.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
24.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
24.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
23.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
23.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
23.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
23.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
23.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
23.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
23.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
23.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
23.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
23.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
23.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
22.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
22.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
22.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
22.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
22.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
22.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
22.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
22.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
22.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
22.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
22.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
22.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
22.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
22.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
22.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
22.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
22.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
22.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
22.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
22.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
22.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
22.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
22.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
22.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
22.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
22.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
21.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
21.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
21.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
21.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
21.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
21.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
21.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
21.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
21.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
21.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
21.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
21.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
21.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
21.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
21.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
21.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
21.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
21.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
21.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
21.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
21.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
21.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
21.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
21.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
21.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
21.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
20.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
20.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
20.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
20.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
20.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
20.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
20.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
20.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
20.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
20.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
20.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
20.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
20.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
20.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
20.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
20.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
20.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
20.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
20.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
20.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
20.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
20.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
19.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
19.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
19.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
19.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
19.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
19.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
19.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
19.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
19.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
19.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
19.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
19.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
19.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
19.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
19.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
19.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
19.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
19.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
19.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
19.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
19.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
19.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
19.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
19.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
19.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
19.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
19.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
19.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
19.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
19.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
19.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
19.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
19.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
19.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
19.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
19.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
19.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
18.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
18.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
18.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
18.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
18.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
18.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
18.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
18.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
18.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
18.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
18.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
18.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
18.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
18.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
18.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
18.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
18.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
18.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
18.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
18.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
18.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
18.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
18.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
18.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
18.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
18.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
17.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
17.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
17.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
17.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
17.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
17.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
17.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
17.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
17.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
17.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
17.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
17.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
17.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
17.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
17.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
17.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
17.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
17.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
17.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
17.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
17.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
17.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
17.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
17.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
17.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
16.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
16.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
16.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
16.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
16.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
16.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
16.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
16.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
16.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
16.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
16.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
16.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
16.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
16.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
16.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
16.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
16.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
16.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
16.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
16.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
16.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
16.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
16.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
16.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
16.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
16.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
16.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
16.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
16.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
15.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
15.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
15.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
15.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
15.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
15.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
15.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
15.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
15.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
15.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
15.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
15.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
15.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
15.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
15.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
15.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
15.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
15.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
15.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
15.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
15.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
15.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
15.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
15.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
15.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
15.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
15.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
14.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
14.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
14.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
14.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
14.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
14.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
14.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
14.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
14.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
14.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
14.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
14.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
13.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
13.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
13.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
13.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
13.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
13.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
13.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
13.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
13.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
13.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
13.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
13.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
13.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
13.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
13.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
13.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
13.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
13.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
12.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
12.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
12.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
12.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
12.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
12.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
12.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
12.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
12.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
12.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
12.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
11.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
11.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
11.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
11.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
11.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
11.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
11.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
11.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
11.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
11.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
11.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
11.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
11.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
11.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
11.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
10.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
10.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
10.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
10.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
10.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
10.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
10.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
10.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
10.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
10.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
9.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
9.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
9.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
9.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
8.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
8.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
8.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
8.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
8.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
7.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
5.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
3.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
XPC is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
57.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
53.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
46.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
41.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
41.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
39.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
38.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
37.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
35.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
34.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
33.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
32.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
32.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
31.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
31.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
31.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
30.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
29.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
29.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
29.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
29.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
29.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
28.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
28.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
28.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
27.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
27.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
27.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
27.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
27.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
27.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
26.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
26.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
26.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
26.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
26.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
26.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
26.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
26.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
25.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
25.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
25.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
25.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
24.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
24.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
24.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
23.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
23.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
23.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
23.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
23.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
23.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
22.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
22.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
22.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
22.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
22.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
21.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
21.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
21.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
21.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
20.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
20.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
20.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
19.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
19.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
19.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
19.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
19.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
18.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
18.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
18.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
18.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
17.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
17.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
17.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
17.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
16.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
15.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
15.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
14.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
14.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
14.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
13.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
12.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
12.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
12.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
11.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
11.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
9.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
XPC is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
103.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
85.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
78.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
70.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
70.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
68.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
63.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
61.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
61.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
61.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
60.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
60.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
58.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
56.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
56.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
55.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
55.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
55.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
55.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
54.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
54.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
54.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
54.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
52.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
52.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
52.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
52.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
51.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
51.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
50.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
50.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
50.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
49.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
48.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
48.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
48.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
48.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
47.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
47.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
47.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
47.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
47.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
46.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
46.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
46.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
46.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
46.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
45.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
45.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
44.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
44.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
44.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
43.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
43.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
43.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
42.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
42.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
42.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
41.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
41.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
40.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
40.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
40.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
39.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
39.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
38.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
38.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
38.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
38.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
37.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
37.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
37.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
37.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
36.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
36.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
36.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
36.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
36.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
36.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
36.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
36.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
36.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
36.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
35.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
35.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
35.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
34.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
34.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
34.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
34.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
33.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
33.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
33.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
33.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
33.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
33.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
32.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
32.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
32.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
31.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
31.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
31.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
31.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
31.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
30.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
30.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
30.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
30.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
30.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
30.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
29.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
28.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
28.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
28.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
28.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
28.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
28.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
27.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
27.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
27.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
27.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
27.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
27.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
27.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
26.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
26.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
26.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
26.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
26.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
26.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
26.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
26.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
26.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
26.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
26.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
26.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
25.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
25.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
25.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
25.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
25.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
24.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
24.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
24.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
24.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
24.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
24.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
24.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
24.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
24.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
24.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
24.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
24.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
23.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
23.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
23.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
23.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
23.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
23.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
22.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
22.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
22.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
22.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
22.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
22.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
22.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
22.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
22.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
21.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
21.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
21.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
21.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
20.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
20.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
20.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
20.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
20.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
20.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
19.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
19.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
19.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
19.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
19.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
19.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
19.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
18.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
18.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
18.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
18.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
18.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
18.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
18.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
18.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
17.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
17.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
17.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
17.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
17.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
17.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
17.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
16.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
16.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
16.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
16.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
16.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
16.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
15.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
15.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
15.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
15.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
15.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
15.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
14.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
14.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
14.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
14.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
14.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
14.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
13.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
13.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
13.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
13.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
13.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
13.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
12.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
12.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
11.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
11.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
11.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
11.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
11.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
11.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
11.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
10.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
10.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
10.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
10.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
10.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
9.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
9.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
9.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
9.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
9.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
8.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
8.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
8.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
8.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
7.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
6.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
5.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
4.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011410003
Tumor
1.2
CPT0066430001
Normal
0.5
CPT0006730001
Normal
0.5
CPT0006440003
Tumor
0.5
CPT0025610001
Normal
0.5
CPT0081620001
Normal
0.5
CPT0012770003
Normal
0.5
CPT0009080003
Normal
0.5
CPT0000790001
Normal
0.5
CPT0065930003
Tumor
0.5
CPT0006950001
Normal
0.4
CPT0078670001
Normal
0.4
CPT0014450004
Tumor
0.4
CPT0065820001
Normal
0.4
CPT0079000001
Normal
0.4
CPT0082010001
Normal
0.4
CPT0089480003
Normal
0.4
CPT0078800003
Tumor
0.4
CPT0014350001
Normal
0.4
CPT0092740003
Normal
0.4
CPT0078840001
Normal
0.4
CPT0007470001
Normal
0.3
CPT0069010001
Normal
0.3
CPT0088780001
Normal
0.3
CPT0001180009
Tumor
0.3
CPT0007870001
Normal
0.3
CPT0078940001
Normal
0.3
CPT0001270001
Normal
0.3
CPT0063640001
Normal
0.3
CPT0010170001
Normal
0.3
CPT0088920001
Normal
0.3
CPT0026420001
Normal
0.3
CPT0065450001
Normal
0.3
CPT0000660001
Normal
0.3
CPT0010120001
Normal
0.3
CPT0006530001
Normal
0.3
CPT0084590001
Normal
0.3
CPT0086830003
Normal
0.3
CPT0025920001
Normal
0.3
CPT0092190003
Normal
0.2
CPT0088710001
Normal
0.2
CPT0077140001
Normal
0.2
CPT0079300001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0000890001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0012290003
Normal
0.2
CPT0001350001
Normal
0.2
CPT0014470001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0075170001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0064400001
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0086370003
Normal
0.2
CPT0087050003
Normal
0.2
CPT0001510001
Normal
0.2
CPT0075720003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0000780007
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0024680001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0079510001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0078530001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0012570003
Normal
0.1
CPT0077110003
Tumor
0.0
CPT0088550004
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0088500001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0063330001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0092310003
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0069160003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0079380003
Tumor
-0.2
CPT0012370003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0079180003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0025050003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0066470004
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0007320003
Tumor
-0.2
CPT0009000003
Tumor
-0.3
CPT0078930003
Tumor
-0.3
CPT0078660003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0087040003
Tumor
-0.3
CPT0015810003
Tumor
-0.3
CPT0018250001
Normal
-0.3
CPT0078510003
Tumor
-0.3
CPT0007860003
Tumor
-0.3
CPT0023350003
Tumor
-0.3
CPT0000870016
Tumor
-0.3
CPT0026410003
Tumor
-0.3
CPT0076330003
Tumor
-0.3
CPT0001220008
Tumor
-0.3
CPT0065430003
Tumor
-0.3
CPT0079480003
Tumor
-0.3
CPT0001500009
Tumor
-0.4
CPT0015730003
Tumor
-0.4
CPT0088970003
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0025580004
Tumor
-0.4
CPT0063630003
Tumor
-0.4
CPT0086870003
Tumor
-0.4
CPT0012280003
Tumor
-0.4
CPT0025880003
Tumor
-0.4
CPT0086820003
Tumor
-0.4
CPT0092730003
Tumor
-0.4
CPT0075560003
Tumor
-0.4
CPT0088690003
Tumor
-0.4
CPT0017410003
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0086030003
Tumor
-0.5
CPT0086360003
Tumor
-0.5
CPT0017850003
Tumor
-0.5
CPT0078990003
Tumor
-0.5
CPT0088480003
Tumor
-0.5
CPT0079230003
Tumor
-0.5
CPT0025290003
Tumor
-0.5
CPT0012550003
Tumor
-0.5
CPT0014160003
Tumor
-0.5
CPT0002270011
Tumor
-0.5
CPT0021240003
Tumor
-0.5
CPT0065690003
Tumor
-0.5
CPT0085670003
Tumor
-0.6
CPT0075130003
Tumor
-0.6
CPT0012180003
Tumor
-0.6
CPT0012670003
Tumor
-0.7
CPT0079410003
Tumor
-0.7
CPT0020120003
Tumor
-0.7
CPT0011240003
Tumor
-0.7
CPT0001340003
Tumor
-1.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
