HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:12.6 nTPM
HPA Brain:14.2 nTPM
GTEx:12.6 nTPM
FANTOM5:38.3 Scaled Tags Per Million
Pig:11.5 nTPM
Mouse:7.6 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035707Antibody CAB009932
Glial cells MediumLow
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 14.2
Sample id Sample description nTPM
Hippocampus
nTPM: 12.4
2529 Female, age 94, left hemisphere 13.5
2621 Female, age 67, right hemisphere 13.1
2148 Female, age 91, left hemisphere 12.9
1855 Male, age 76, left hemisphere 11.8
1911 Female, age 85, right hemisphere 11.7
1898 Male, age 80, left hemisphere 11.5
Dentate gyrus
nTPM: 12.5
2530 Female, age 94, left hemisphere 15.7
2246 Female, age 85, both hemispheres 15.1
2010 Male, age 76, both hemispheres 11.7
2531 Female, age 67, both hemispheres 11.5
2528 Male, age 74, both hemispheres 10.8
1927 Female, age 91, both hemispheres 10.1
Entorhinal gyrus
nTPM: 14.1
2117 Female, age 91, right hemisphere 16.3
1938 Female, age 85, left hemisphere 14.6
2686 Male, age 75, right hemisphere 14.0
2613 Female, age 94, left hemisphere 13.9
2764 Male, age 80, right hemisphere 13.4
1787 Male, age 76, left hemisphere 12.7
Hippocampus, CA1
nTPM: 11.3
2082 Female, age 91, right hemisphere 13.3
2527 Male, age 74, both hemispheres 12.6
1873 Female, age 85, both hemispheres 11.4
2749 Male, age 80, left hemisphere 10.3
2045 Male, age 76, both hemispheres 8.9
Hippocampus, CA2
nTPM: 13.4
1940 Female, age 85, left hemisphere 15.2
1963 Male, age 80, left hemisphere 13.8
2437 Female, age 94, left hemisphere 13.8
1892 Male, age 76, both hemispheres 13.0
2249 Male, age 74, both hemispheres 12.9
2113 Female, age 91, right hemisphere 11.9
Hippocampus, CA3
nTPM: 11.5
1891 Female, age 85, both hemispheres 14.4
2436 Male, age 74, both hemispheres 13.7
1867 Male, age 76, both hemispheres 11.2
2861 Female, age 67, both hemispheres 10.8
2620 Female, age 94, left hemisphere 10.1
2137 Male, age 80, left hemisphere 8.8
Parahippocampal cortex
nTPM: 13.0
2245 Female, age 91, both hemispheres 14.9
2532 Female, age 72, left hemisphere 14.9
1990 Female, age 91, right hemisphere 14.8
2692 Male, age 74, both hemispheres 13.5
2622 Female, age 67, right hemisphere 13.1
1933 Female, age 85, both hemispheres 12.6
2018 Male, age 76, both hemispheres 12.5
1850 Male, age 80, both hemispheres 12.2
2693 Female, age 94, both hemispheres 11.2
2250 Female, age 67, right hemisphere 10.8
Perirhinal gyrus
nTPM: 11.9
1841 Female, age 85, right hemisphere 12.9
2848 Male, age 76, right hemisphere 12.6
1794 Male, age 80, right hemisphere 11.7
2521 Female, age 94, right hemisphere 11.6
1847 Female, age 91, left hemisphere 10.8
Subiculum
nTPM: 14.2
2042 Male, age 76, both hemispheres 16.3
1901 Male, age 80, both hemispheres 15.9
2619 Male, age 74, both hemispheres 13.9
2729 Female, age 91, right hemisphere 13.2
2438 Female, age 94, left hemisphere 13.0
1977 Female, age 85, both hemispheres 12.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 12.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.6
Samples: 197

Max nTPM: 23.9
Min nTPM: 7.4
Std nTPM: 3.2
Median nTPM: 11.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 23.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 23.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 22.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 21.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 21.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 20.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 20.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 19.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 19.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 19.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 19.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 38.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.3
FF:10153-102I9 76 years, female 46.5
FF:10169-103B7 60 years, female 30.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 11.5
Pig sample Sample description nTPM
Subiculum
nTPM: 10.8
Samples: 4

Max nTPM: 12.1
Min nTPM: 9.6
Sample A Female 12.1
Sample B Female 9.9
Sample C Male 11.4
Sample D Male 9.6
Dorsal hippocampus
nTPM: 10.9
Samples: 4

Max nTPM: 12.6
Min nTPM: 7.9
Sample A Female 12.6
Sample B Female 11.1
Sample C Male 12.1
Sample D Male 7.9
Entorhinal cortex
nTPM: 8.9
Samples: 4

Max nTPM: 9.9
Min nTPM: 7.3
Sample A Female 9.4
Sample B Female 9.1
Sample C Male 9.9
Sample D Male 7.3
Ventral hippocampus
nTPM: 11.5
Samples: 4

Max nTPM: 13.7
Min nTPM: 9.7
Sample A Female 11.7
Sample B Female 9.7
Sample C Male 13.7
Sample D Male 10.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 7.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.7
Samples: 4

Max nTPM: 7.9
Min nTPM: 5.5
Sample A Male 7.9
Sample B Male 7.0
Sample C Female 6.2
Sample D Female 5.5
Hippocampal formation
nTPM: 7.5
Samples: 4

Max nTPM: 8.3
Min nTPM: 6.3
Sample A Male 6.3
Sample B Male 8.3
Sample C Female 7.3
Sample D Female 8.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
70195048 Antisense, RP_050517_02_C06, Mouse strain C57BL/6J (56 days, male) 0.5

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