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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUS1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
36.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
29.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
28.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
28.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
25.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
25.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
24.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
24.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
23.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
22.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
22.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
21.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
21.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
20.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
20.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
20.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
20.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
19.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
19.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
19.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
19.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
19.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
19.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
18.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
18.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
18.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
18.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
17.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
17.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
17.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
17.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
17.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
17.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
17.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
16.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
16.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
16.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
16.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
16.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
16.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
15.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
15.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
15.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
15.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
15.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
15.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
15.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
15.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
15.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
15.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
14.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
14.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
14.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
14.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
14.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
14.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
14.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
14.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
14.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
14.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
14.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
14.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
14.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
14.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
14.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
14.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
14.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
13.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
13.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
13.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
13.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
13.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
13.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
13.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
13.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
13.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
13.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
13.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
13.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
13.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
13.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
13.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
13.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
13.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
13.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
12.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
12.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
12.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
12.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
12.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
12.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
12.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
12.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
12.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
12.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
12.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
12.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
12.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
12.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
12.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
12.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
12.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
12.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
12.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
12.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
11.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
11.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
11.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
11.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
11.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
11.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
11.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
11.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
11.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
11.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
11.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
11.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
11.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
11.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
11.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
11.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
11.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
11.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
11.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
11.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
11.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
11.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
11.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
11.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
11.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
10.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
10.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
10.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
10.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
10.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
10.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
10.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
10.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
10.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
10.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
10.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
10.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
10.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
10.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
10.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
10.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
10.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
10.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
10.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
10.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
10.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
10.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
10.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
10.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
10.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
10.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
10.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
10.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
10.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
10.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
10.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
10.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
9.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
9.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
9.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
9.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
9.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
9.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
9.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
9.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
9.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
9.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
9.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
9.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
9.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
9.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
9.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
9.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
9.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
9.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
9.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
9.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
9.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
9.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
9.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
8.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
8.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
8.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
8.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
8.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
8.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
8.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
8.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
8.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
8.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
8.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
8.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
8.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
8.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
8.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
8.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
8.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
8.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
8.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
8.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
8.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
8.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
8.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
8.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
8.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
8.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
8.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
8.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
7.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
7.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
7.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
7.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
7.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
7.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
7.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
7.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
7.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
7.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
7.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
7.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
7.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
7.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
7.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
7.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
7.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
7.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
7.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
7.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
7.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
7.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
7.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
7.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
7.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
7.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
7.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
7.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
7.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
7.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
7.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
7.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
6.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
6.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
6.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
6.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
6.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
6.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
6.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
6.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
6.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
6.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
6.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
6.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
6.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
6.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
6.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
6.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
6.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
6.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
6.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
6.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
6.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
6.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
6.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
6.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
6.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
6.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
6.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
6.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
6.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
6.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
6.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
6.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
6.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
6.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
6.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
5.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
5.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
5.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
5.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
5.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
5.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
5.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
5.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
5.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
5.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
5.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
5.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
5.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
5.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
5.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
5.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
5.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
5.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
5.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
4.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
4.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
4.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
4.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
4.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
4.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
4.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
4.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
4.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
4.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
4.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
4.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
3.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
3.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
3.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NUS1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.7
Number of samples
231
Samples
Sample
Description
TPM
DO50778
0 years, male, NA, stage:4, alive, 630 days
48.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
31.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
25.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
24.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
24.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
24.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
23.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
23.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
22.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
21.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
21.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
21.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
20.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
20.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
19.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
19.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
18.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
18.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
18.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
18.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
17.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
17.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
17.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
17.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
17.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
16.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
16.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
16.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
16.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
16.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
16.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
16.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
16.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
15.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
15.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
15.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
15.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
15.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
15.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
15.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
15.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
15.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
15.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
14.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
14.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
14.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
14.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
14.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
14.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
14.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
14.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
14.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
14.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
14.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
14.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
14.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
14.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
14.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
14.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
13.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
13.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
13.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
13.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
13.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
13.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
13.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
13.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
13.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
13.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
13.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
13.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
13.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
13.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
13.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
13.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
13.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
13.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
13.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
13.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
13.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
13.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
12.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
12.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
12.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
12.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
12.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
12.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
12.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
12.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
12.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
12.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
12.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
12.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
12.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
12.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
12.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
12.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
12.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
12.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
12.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
12.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
12.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
11.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
11.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
11.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
11.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
11.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
11.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
11.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
11.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
11.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
11.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
11.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
11.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
11.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
11.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
11.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
10.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
10.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
10.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
10.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
10.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
10.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
10.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
10.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
10.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
10.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
10.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
10.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
10.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
10.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
10.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
10.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
10.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
9.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
9.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
9.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
9.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
9.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
9.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
9.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
9.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
9.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
9.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
9.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
9.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
9.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
9.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
9.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
9.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
9.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
9.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
9.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
9.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
9.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
8.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
8.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
8.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
8.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
8.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
8.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
8.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
8.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
8.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
8.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
8.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
8.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
8.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
8.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
8.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
8.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
8.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
8.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
8.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
8.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
8.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
8.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
8.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
8.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
7.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
7.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
7.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
7.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
7.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
7.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
7.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
7.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
7.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
7.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
7.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
7.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
7.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
7.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
7.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
7.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
7.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
7.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
7.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
6.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
6.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
6.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
6.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
6.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
6.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
6.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
6.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
6.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
5.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
5.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
5.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
5.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
5.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
5.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
5.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
5.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
5.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
5.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
5.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
5.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
5.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
4.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
4.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
4.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
4.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
3.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
663
Tumor
1.2
617
Tumor
1.0
777
Tumor
1.0
713
Tumor
1.0
698
Normal
0.9
815
Tumor
0.9
527
Tumor
0.9
567
Tumor
0.7
965
Tumor
0.7
223
Tumor
0.7
571
Tumor
0.7
533
Tumor
0.7
883
Tumor
0.7
537
Tumor
0.7
913
Tumor
0.7
363
Tumor
0.7
863
Tumor
0.7
851
Tumor
0.6
491
Tumor
0.6
497
Tumor
0.6
222
Normal
0.5
923
Tumor
0.5
187
Tumor
0.5
367
Tumor
0.5
641
Tumor
0.5
436
Normal
0.5
448
Normal
0.5
714
Normal
0.5
411
Tumor
0.5
722
Normal
0.4
755
Tumor
0.4
123
Tumor
0.4
468
Normal
0.4
227
Tumor
0.4
661
Tumor
0.4
724
Normal
0.4
1016
Normal
0.4
627
Tumor
0.4
137
Tumor
0.4
721
Tumor
0.4
868
Normal
0.4
857
Tumor
0.4
862
Normal
0.4
214
Normal
0.3
817
Tumor
0.3
696
Normal
0.3
271
Tumor
0.3
953
Tumor
0.3
662
Normal
0.3
125
Tumor
0.3
648
Normal
0.3
145
Tumor
0.3
464
Normal
0.3
267
Tumor
0.3
574
Normal
0.3
1021
Tumor
0.3
368
Normal
0.3
196
Normal
0.3
867
Tumor
0.3
126
Normal
0.3
446
Normal
0.2
858
Normal
0.2
635
Tumor
0.2
218
Normal
0.2
361
Tumor
0.2
286
Normal
0.2
461
Tumor
0.2
135
Tumor
0.2
955
Tumor
0.2
434
Normal
0.2
481
Tumor
0.2
328
Normal
0.2
228
Normal
0.2
672
Normal
0.2
818
Normal
0.2
472
Normal
0.2
356
Normal
0.2
914
Normal
0.2
666
Normal
0.2
416
Normal
0.2
435
Tumor
0.2
911
Tumor
0.2
861
Tumor
0.2
746
Normal
0.2
716
Normal
0.2
921
Tumor
0.2
956
Normal
0.2
141
Tumor
0.2
728
Normal
0.2
487
Tumor
0.2
376
Normal
0.2
573
Tumor
0.2
816
Normal
0.2
466
Normal
0.2
1014
Normal
0.1
114
Normal
0.1
647
Tumor
0.1
185
Tumor
0.1
515
Tumor
0.1
327
Tumor
0.1
852
Normal
0.1
132
Normal
0.1
285
Tumor
0.1
365
Tumor
0.1
685
Tumor
0.1
563
Tumor
0.1
482
Normal
0.1
191
Tumor
0.1
741
Tumor
0.1
188
Normal
0.1
957
Tumor
0.1
452
Normal
0.1
873
Tumor
0.1
742
Normal
0.1
128
Normal
0.1
952
Normal
0.1
568
Normal
0.1
471
Tumor
0.1
456
Normal
0.1
864
Normal
0.1
564
Normal
0.1
665
Tumor
0.1
212
Normal
0.1
1026
Normal
0.1
723
Tumor
0.1
231
Tumor
0.1
982
Normal
0.1
478
Normal
0.1
664
Normal
0.1
824
Normal
0.1
443
Tumor
0.1
615
Tumor
0.1
866
Normal
0.1
426
Normal
0.0
284
Normal
0.0
786
Normal
0.0
473
Tumor
0.0
978
Normal
0.0
384
Normal
0.0
963
Tumor
0.0
283
Tumor
0.0
224
Normal
0.0
976
Normal
0.0
272
Normal
0.0
785
Tumor
0.0
572
Normal
0.0
514
Normal
0.0
366
Normal
0.0
428
Normal
0.0
474
Normal
0.0
738
Normal
0.0
414
Normal
0.0
874
Normal
0.0
534
Normal
0.0
462
Normal
0.0
258
Normal
0.0
494
Normal
0.0
944
Normal
0.0
257
Tumor
0.0
112
Tumor
0.0
262
Normal
0.0
882
Normal
0.0
938
Normal
0.0
113
Tumor
0.0
111
Normal
0.0
881
Tumor
0.0
984
Normal
0.0
362
Normal
0.0
1013
Tumor
0.0
558
Normal
0.0
1042
Normal
0.0
172
Normal
0.0
232
Normal
0.0
383
Tumor
0.0
553
Tumor
0.0
498
Normal
0.0
195
Tumor
0.0
484
Normal
0.0
958
Normal
0.0
477
Tumor
0.0
966
Normal
0.0
364
Normal
0.0
148
Normal
-0.1
636
Normal
-0.1
628
Normal
-0.1
967
Tumor
-0.1
915
Tumor
-0.1
192
Normal
-0.1
488
Normal
-0.1
916
Normal
-0.1
422
Normal
-0.1
823
Tumor
-0.1
926
Normal
-0.1
616
Normal
-0.1
878
Normal
-0.1
526
Normal
-0.1
136
Normal
-0.1
433
Tumor
-0.1
1022
Normal
-0.1
268
Normal
-0.1
1027
Tumor
-0.1
968
Normal
-0.1
432
Normal
-0.1
518
Normal
-0.1
525
Tumor
-0.1
975
Tumor
-0.1
964
Normal
-0.1
162
Normal
-0.1
943
Tumor
-0.1
686
Normal
-0.1
217
Tumor
-0.1
884
Normal
-0.1
211
Tumor
-0.1
814
Normal
-0.1
528
Normal
-0.1
695
Tumor
-0.1
715
Tumor
-0.1
451
Tumor
-0.2
412
Normal
-0.2
813
Tumor
-0.2
465
Tumor
-0.2
355
Tumor
-0.2
756
Normal
-0.2
727
Tumor
-0.2
918
Normal
-0.2
1032
Normal
-0.2
423
Tumor
-0.2
455
Tumor
-0.2
744
Normal
-0.2
261
Tumor
-0.2
618
Normal
-0.2
778
Normal
-0.2
138
Normal
-0.2
221
Tumor
-0.2
492
Normal
-0.2
124
Normal
-0.2
415
Tumor
-0.2
954
Normal
-0.2
912
Normal
-0.2
424
Normal
-0.2
924
Normal
-0.2
444
Normal
-0.2
1028
Normal
-0.2
981
Tumor
-0.2
1031
Tumor
-0.3
554
Normal
-0.3
493
Tumor
-0.3
186
Normal
-0.3
546
Normal
-0.3
127
Tumor
-0.3
1043
Tumor
-0.3
557
Tumor
-0.3
483
Tumor
-0.3
642
Normal
-0.3
545
Tumor
-0.3
1044
Normal
-0.3
917
Tumor
-0.3
463
Tumor
-0.3
922
Normal
-0.3
445
Tumor
-0.3
161
Tumor
-0.3
513
Tumor
-0.3
951
Tumor
-0.3
983
Tumor
-0.3
925
Tumor
-0.3
421
Tumor
-0.4
671
Tumor
-0.4
977
Tumor
-0.4
743
Tumor
-0.4
517
Tumor
-0.4
147
Tumor
-0.4
737
Tumor
-0.4
524
Normal
-0.4
523
Tumor
-0.4
467
Tumor
-0.4
375
Tumor
-0.4
745
Tumor
-0.4
413
Tumor
-0.4
937
Tumor
-0.4
516
Normal
-0.5
1015
Tumor
-0.5
865
Tumor
-0.5
431
Tumor
-0.5
1046
Normal
-0.5
213
Tumor
-0.5
877
Tumor
-0.5
1041
Tumor
-0.5
536
Normal
-0.6
1025
Tumor
-0.6
425
Tumor
-0.6
171
Tumor
-0.7
538
Normal
-0.7
447
Tumor
-0.7
1045
Tumor
-0.7
427
Tumor
-0.8
697
Tumor
-0.9
142
Normal
-1.0
146
Normal
-1.0
535
Tumor
-1.3
131
Tumor
-2.1
351
Tumor
N/A
352
Normal
N/A
353
Tumor
N/A
354
Normal
N/A
357
Tumor
N/A
358
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
387
Tumor
N/A
388
Normal
N/A
391
Tumor
N/A
392
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
278
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
311
Tumor
N/A
312
Normal
N/A
313
Tumor
N/A
314
Normal
N/A
331
Tumor
N/A
332
Normal
N/A
341
Tumor
N/A
342
Normal
N/A
343
Tumor
N/A
344
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.