HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:26.2 nTPM
HPA Brain:93.3 nTPM
GTEx:26.2 nTPM
FANTOM5:25.6 Scaled Tags Per Million
Pig:58.9 nTPM
Mouse:36.1 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB022300
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 93.3
Sample id Sample description nTPM
Hippocampus
nTPM: 88.6
2529 Female, age 94, left hemisphere 121.2
1911 Female, age 85, right hemisphere 92.9
1855 Male, age 76, left hemisphere 87.8
2148 Female, age 91, left hemisphere 79.4
1898 Male, age 80, left hemisphere 78.4
2621 Female, age 67, right hemisphere 71.8
Dentate gyrus
nTPM: 88.4
2528 Male, age 74, both hemispheres 107.6
2246 Female, age 85, both hemispheres 104.3
2010 Male, age 76, both hemispheres 87.5
2530 Female, age 94, left hemisphere 85.5
1927 Female, age 91, both hemispheres 73.1
2531 Female, age 67, both hemispheres 72.4
Entorhinal gyrus
nTPM: 78.9
2117 Female, age 91, right hemisphere 93.4
2686 Male, age 75, right hemisphere 92.7
1938 Female, age 85, left hemisphere 80.2
1787 Male, age 76, left hemisphere 79.1
2764 Male, age 80, right hemisphere 64.6
2613 Female, age 94, left hemisphere 63.2
Hippocampus, CA1
nTPM: 91.3
2082 Female, age 91, right hemisphere 113.7
2527 Male, age 74, both hemispheres 113.7
1873 Female, age 85, both hemispheres 93.4
2045 Male, age 76, both hemispheres 74.6
2749 Male, age 80, left hemisphere 61.0
Hippocampus, CA2
nTPM: 90.4
2249 Male, age 74, both hemispheres 111.0
2113 Female, age 91, right hemisphere 104.4
1940 Female, age 85, left hemisphere 102.2
2437 Female, age 94, left hemisphere 86.9
1963 Male, age 80, left hemisphere 79.6
1892 Male, age 76, both hemispheres 58.6
Hippocampus, CA3
nTPM: 93.3
2436 Male, age 74, both hemispheres 166.3
1891 Female, age 85, both hemispheres 95.9
2861 Female, age 67, both hemispheres 82.4
2137 Male, age 80, left hemisphere 80.3
2620 Female, age 94, left hemisphere 70.9
1867 Male, age 76, both hemispheres 63.9
Parahippocampal cortex
nTPM: 81.4
2692 Male, age 74, both hemispheres 123.1
2622 Female, age 67, right hemisphere 89.9
1933 Female, age 85, both hemispheres 85.0
2250 Female, age 67, right hemisphere 84.8
2245 Female, age 91, both hemispheres 78.6
2018 Male, age 76, both hemispheres 77.4
1990 Female, age 91, right hemisphere 74.8
2693 Female, age 94, both hemispheres 71.0
1850 Male, age 80, both hemispheres 65.6
2532 Female, age 72, left hemisphere 63.9
Perirhinal gyrus
nTPM: 67.5
2521 Female, age 94, right hemisphere 69.3
2848 Male, age 76, right hemisphere 68.8
1847 Female, age 91, left hemisphere 67.4
1794 Male, age 80, right hemisphere 66.4
1841 Female, age 85, right hemisphere 65.5
Subiculum
nTPM: 90.1
2619 Male, age 74, both hemispheres 112.0
2729 Female, age 91, right hemisphere 104.8
2438 Female, age 94, left hemisphere 96.1
2042 Male, age 76, both hemispheres 80.9
1901 Male, age 80, both hemispheres 76.6
1977 Female, age 85, both hemispheres 70.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 26.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.2
Samples: 197

Max nTPM: 59.9
Min nTPM: 9.9
Std nTPM: 8.6
Median nTPM: 24.9
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 59.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 50.7
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 50.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 50.4
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 46.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 46.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 45.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 45.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 44.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 44.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 43.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 25.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.6
FF:10153-102I9 76 years, female 27.5
FF:10169-103B7 60 years, female 23.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 58.9
Pig sample Sample description nTPM
Subiculum
nTPM: 58.9
Samples: 4

Max nTPM: 61.3
Min nTPM: 56.9
Sample A Female 58.1
Sample B Female 59.4
Sample C Male 56.9
Sample D Male 61.3
Dorsal hippocampus
nTPM: 42.4
Samples: 4

Max nTPM: 48.8
Min nTPM: 38.6
Sample A Female 39.7
Sample B Female 42.6
Sample C Male 48.8
Sample D Male 38.6
Entorhinal cortex
nTPM: 51.0
Samples: 4

Max nTPM: 56.4
Min nTPM: 48.1
Sample A Female 50.2
Sample B Female 56.4
Sample C Male 48.1
Sample D Male 49.4
Ventral hippocampus
nTPM: 50.5
Samples: 4

Max nTPM: 56.8
Min nTPM: 41.8
Sample A Female 47.5
Sample B Female 56.8
Sample C Male 55.8
Sample D Male 41.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 36.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.1
Samples: 4

Max nTPM: 39.5
Min nTPM: 31.5
Sample A Male 39.5
Sample B Male 36.7
Sample C Female 36.5
Sample D Female 31.5
Hippocampal formation
nTPM: 28.6
Samples: 4

Max nTPM: 32.7
Min nTPM: 23.3
Sample A Male 32.7
Sample B Male 27.5
Sample C Female 23.3
Sample D Female 31.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
71280976 Antisense, RP_050818_02_A01, Mouse strain C57BL/6J (56 days, male) 6.4
73616034 Antisense, RP_050818_02_A01, Mouse strain C57BL/6J (56 days, male) 2.5

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