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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LGI4 is potential prognostic, high expression is favorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
13.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
8.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
7.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
5.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
2.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
2.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
2.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
2.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
2.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
1.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
1.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
1.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
1.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
1.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
1.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
1.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
1.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
1.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
1.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LGI4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
460.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
415.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
414.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
395.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
392.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
390.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
374.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
372.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
358.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
357.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
320.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
308.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
294.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
284.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
283.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
277.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
258.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
252.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
244.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
228.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
221.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
220.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
214.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
212.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
209.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
193.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
192.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
191.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
185.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
176.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
174.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
167.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
165.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
164.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
163.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
161.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
160.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
159.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
154.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
146.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
143.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
138.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
138.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
131.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
127.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
117.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
115.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
114.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
113.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
110.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
106.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
104.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
103.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
99.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
97.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
96.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
94.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
92.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
91.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
90.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
88.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
88.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
86.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
85.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
85.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
85.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
84.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
82.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
81.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
80.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
80.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
79.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
77.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
77.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
77.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
76.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
76.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
74.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
74.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
70.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
70.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
68.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
67.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
64.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
63.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
61.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
61.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
61.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
61.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
59.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
59.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
57.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
57.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
56.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
56.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
55.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
54.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
52.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
52.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
51.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
51.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
50.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
50.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
49.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
48.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
48.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
48.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
48.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
48.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
47.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
46.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
46.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
46.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
46.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
46.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
45.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
44.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
44.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
42.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
42.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
42.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
42.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
42.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
41.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
40.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
40.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
40.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
40.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
40.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
39.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
39.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
39.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
39.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
38.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
38.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
37.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
37.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
37.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
37.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
37.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
36.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
36.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
36.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
35.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
35.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
35.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
34.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
34.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
34.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
34.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
34.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
34.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
32.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
32.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
32.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
31.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
31.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
31.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
30.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
30.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
30.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
29.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
28.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
27.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
27.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
27.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
26.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
26.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
26.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
26.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
26.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
25.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
25.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
25.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
25.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
25.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
25.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
24.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
24.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
24.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
24.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
24.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
24.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
23.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
23.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
23.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
22.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
22.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
22.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
22.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
21.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
21.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
21.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
20.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
20.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
20.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
20.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
20.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
20.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
19.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
19.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
19.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
19.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
19.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
19.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
19.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
18.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
18.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
18.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
18.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
18.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
18.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
18.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
18.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
17.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
17.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
17.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
16.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
16.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
16.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
16.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
16.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
16.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
16.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
16.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
15.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
15.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
15.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
15.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
15.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
15.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
14.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
14.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
14.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
14.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
14.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
14.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
14.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
14.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
13.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
13.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
13.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
13.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
13.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
13.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
13.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
13.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
13.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
13.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
12.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
12.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
12.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
12.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
12.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
12.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
11.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
11.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
11.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
11.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
11.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
11.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
11.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
10.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
10.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
10.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
10.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
10.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
10.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
9.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
9.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
9.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
9.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
9.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
9.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
9.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
9.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
9.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
9.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
8.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
8.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
8.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
8.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
8.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
8.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
8.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
8.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
8.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
8.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
8.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
8.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
8.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
8.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
8.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
8.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
8.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
8.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
8.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
8.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
8.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
8.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
8.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
8.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
7.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
7.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
7.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
7.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
7.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
7.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
7.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
7.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
7.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
7.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
7.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
7.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
7.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
7.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
7.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
7.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
7.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
7.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
6.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
6.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
6.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
6.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
6.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
6.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
6.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
6.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
6.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
6.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
6.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
6.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
6.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
6.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
6.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
6.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
6.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
6.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
6.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
6.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
6.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
6.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
5.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
5.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
5.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
5.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
5.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
5.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
5.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
5.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
5.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
5.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
5.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
5.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
5.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
5.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
5.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
5.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
5.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
5.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
5.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
4.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
4.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
4.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
4.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
4.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
4.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
4.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
4.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
4.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
4.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
4.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
4.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
4.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
4.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
4.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
4.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
4.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
4.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
4.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
4.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
4.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
4.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
4.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
4.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
4.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
4.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
4.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
3.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
3.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
3.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
3.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
3.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
3.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
3.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
3.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
3.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
3.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
3.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
3.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
3.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
3.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
3.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
3.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
3.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
3.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
3.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
3.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
3.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
3.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
3.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
2.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
2.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
2.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
2.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
2.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
2.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
2.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
2.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
2.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
2.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
2.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
2.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
2.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
2.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
2.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
2.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
2.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
2.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
2.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
2.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
2.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
2.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
2.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
2.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
2.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
1.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
1.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
1.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
1.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
1.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
1.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
1.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
1.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
1.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
1.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
1.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
1.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
1.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
1.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
1.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
1.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
1.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
1.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
1.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
0.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
0.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
0.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
0.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
0.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
0.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
0.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
0.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
0.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
0.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
0.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
0.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
0.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
0.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
0.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
0.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
0.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
0.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
0.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
0.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
0.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LGI4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
330.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
295.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
293.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
222.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
200.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
198.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
198.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
194.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
190.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
185.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
165.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
158.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
143.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
115.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
92.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
91.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
90.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
80.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
77.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
75.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
73.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
72.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
72.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
55.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
52.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
51.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
50.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
47.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
46.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
46.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
43.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
40.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
32.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
30.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
26.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
25.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
24.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
23.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
20.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
18.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
17.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
14.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
14.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
12.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
12.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
10.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
10.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
9.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
9.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
9.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
9.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
8.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
8.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
8.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
7.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
7.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
7.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
6.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
5.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
5.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
5.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
5.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
4.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
4.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
4.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
4.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
4.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
4.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
4.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
4.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
3.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
3.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
3.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
3.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
3.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
3.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
3.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
3.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
2.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
2.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
2.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
2.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
2.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
2.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
2.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
2.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
2.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
2.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
1.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
1.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
1.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
1.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
0.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
0.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
0.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
0.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
0.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
46.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
25.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
19.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
17.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
7.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
4.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
4.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
3.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
3.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
3.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
3.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
3.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
3.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
2.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
2.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
2.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
2.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
2.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
2.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
2.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
2.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
2.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
1.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
1.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
1.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
1.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
1.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
1.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
1.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
1.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
1.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
1.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
1.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
1.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
1.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
1.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
1.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
1.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
0.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
0.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
0.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
0.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
0.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
0.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
0.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
0.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
0.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
0.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
0.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
0.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
0.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
0.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
0.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
0.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
0.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
0.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
0.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
0.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
0.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
0.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
0.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
0.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
0.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
0.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
0.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
0.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
0.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
0.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
0.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
0.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
0.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
0.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
0.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
0.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
0.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
0.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
0.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
0.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
0.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
0.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
0.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
0.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
0.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
0.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
0.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
0.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
0.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
0.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
0.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
0.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
0.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
0.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
0.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
0.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
0.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
0.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
0.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
0.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
0.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
0.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
0.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
0.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
0.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
0.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
0.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
0.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
0.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
0.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
0.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
0.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
0.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
0.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
0.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
0.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
0.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
0.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
0.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
0.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
0.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
0.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
0.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
0.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
0.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
0.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
0.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
0.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
0.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
0.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
0.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
0.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
0.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
0.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
0.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
0.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
0.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
0.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
0.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
0.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
0.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
0.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
0.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
0.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
0.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
0.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
0.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
0.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
0.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
0.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
0.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
0.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
0.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
0.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
0.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
0.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
0.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
0.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
0.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
0.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
0.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
0.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
0.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
0.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
0.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
0.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
0.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
0.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
0.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
0.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
0.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
0.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
0.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
0.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
0.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
0.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
0.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
0.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
0.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
0.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
0.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
0.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
0.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
0.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
0.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
0.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
0.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
0.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
0.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
