HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:50.3 nTPM
HPA Brain:53.1 nTPM
GTEx:50.3 nTPM
FANTOM5:191.8 Scaled Tags Per Million
Pig:30.4 nTPM
Mouse:19.3 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042116Antibody HPA043556
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 53.1
Sample id Sample description nTPM
Hippocampus
nTPM: 53.1
2529 Female, age 94, left hemisphere 65.0
2148 Female, age 91, left hemisphere 57.2
1911 Female, age 85, right hemisphere 56.5
2621 Female, age 67, right hemisphere 53.1
1855 Male, age 76, left hemisphere 45.2
1898 Male, age 80, left hemisphere 41.5
Dentate gyrus
nTPM: 47.0
2528 Male, age 74, both hemispheres 57.2
2246 Female, age 85, both hemispheres 52.6
2531 Female, age 67, both hemispheres 48.9
2530 Female, age 94, left hemisphere 47.0
1927 Female, age 91, both hemispheres 38.4
2010 Male, age 76, both hemispheres 37.9
Entorhinal gyrus
nTPM: 48.5
2686 Male, age 75, right hemisphere 62.7
1938 Female, age 85, left hemisphere 52.2
2117 Female, age 91, right hemisphere 48.9
2764 Male, age 80, right hemisphere 48.0
1787 Male, age 76, left hemisphere 44.6
2613 Female, age 94, left hemisphere 34.9
Hippocampus, CA1
nTPM: 46.8
2527 Male, age 74, both hemispheres 60.1
2082 Female, age 91, right hemisphere 51.0
2749 Male, age 80, left hemisphere 46.5
1873 Female, age 85, both hemispheres 43.2
2045 Male, age 76, both hemispheres 33.2
Hippocampus, CA2
nTPM: 44.8
2113 Female, age 91, right hemisphere 55.4
1940 Female, age 85, left hemisphere 52.5
2249 Male, age 74, both hemispheres 50.9
2437 Female, age 94, left hemisphere 44.4
1963 Male, age 80, left hemisphere 36.7
1892 Male, age 76, both hemispheres 29.0
Hippocampus, CA3
nTPM: 47.3
2861 Female, age 67, both hemispheres 72.1
2137 Male, age 80, left hemisphere 52.6
1891 Female, age 85, both hemispheres 45.2
2620 Female, age 94, left hemisphere 40.4
2436 Male, age 74, both hemispheres 36.8
1867 Male, age 76, both hemispheres 36.7
Parahippocampal cortex
nTPM: 52.0
1933 Female, age 85, both hemispheres 62.3
2622 Female, age 67, right hemisphere 60.0
2245 Female, age 91, both hemispheres 58.7
2692 Male, age 74, both hemispheres 56.9
2250 Female, age 67, right hemisphere 55.7
2532 Female, age 72, left hemisphere 54.6
1990 Female, age 91, right hemisphere 45.7
1850 Male, age 80, both hemispheres 44.2
2693 Female, age 94, both hemispheres 41.8
2018 Male, age 76, both hemispheres 39.7
Perirhinal gyrus
nTPM: 49.2
1794 Male, age 80, right hemisphere 54.0
1841 Female, age 85, right hemisphere 54.0
2521 Female, age 94, right hemisphere 50.9
2848 Male, age 76, right hemisphere 44.1
1847 Female, age 91, left hemisphere 42.9
Subiculum
nTPM: 48.1
2729 Female, age 91, right hemisphere 54.3
2619 Male, age 74, both hemispheres 53.8
1977 Female, age 85, both hemispheres 46.7
2042 Male, age 76, both hemispheres 45.9
2438 Female, age 94, left hemisphere 45.7
1901 Male, age 80, both hemispheres 42.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 50.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.3
Samples: 197

Max nTPM: 106.9
Min nTPM: 18.1
Std nTPM: 17.3
Median nTPM: 47.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 106.9
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 105.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 102.2
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 97.6
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 94.4
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 92.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 90.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 87.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 85.2
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 85.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 84.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 191.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 191.8
FF:10169-103B7 60 years, female 198.3
FF:10153-102I9 76 years, female 185.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 30.4
Pig sample Sample description nTPM
Subiculum
nTPM: 29.3
Samples: 4

Max nTPM: 35.6
Min nTPM: 25.6
Sample A Female 35.6
Sample B Female 27.2
Sample C Male 28.6
Sample D Male 25.6
Dorsal hippocampus
nTPM: 29.3
Samples: 4

Max nTPM: 37.2
Min nTPM: 23.7
Sample A Female 37.2
Sample B Female 25.9
Sample C Male 30.5
Sample D Male 23.7
Entorhinal cortex
nTPM: 28.3
Samples: 4

Max nTPM: 31.8
Min nTPM: 22.1
Sample A Female 29.3
Sample B Female 31.8
Sample C Male 30.1
Sample D Male 22.1
Ventral hippocampus
nTPM: 30.4
Samples: 4

Max nTPM: 37.5
Min nTPM: 24.7
Sample A Female 30.8
Sample B Female 24.7
Sample C Male 37.5
Sample D Male 28.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 19.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.3
Samples: 4

Max nTPM: 24.1
Min nTPM: 15.5
Sample A Male 24.1
Sample B Male 17.1
Sample C Female 20.5
Sample D Female 15.5
Hippocampal formation
nTPM: 17.2
Samples: 4

Max nTPM: 18.0
Min nTPM: 16.7
Sample A Male 18.0
Sample B Male 16.9
Sample C Female 17.1
Sample D Female 16.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69736112 Antisense, RP_050503_04_C01, Mouse strain C57BL/6J (56 days, male) 0.3

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