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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RMND5A is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
42.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
41.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
39.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
33.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
32.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
32.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
31.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
31.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
31.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
30.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
29.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
29.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
28.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
28.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
27.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
27.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
27.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
26.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
26.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
26.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
26.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
26.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
26.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
25.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
25.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
25.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
25.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
25.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
25.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
24.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
24.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
24.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
24.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
24.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
23.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
23.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
23.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
23.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
23.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
23.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
23.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
23.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
23.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
23.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
23.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
23.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
23.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
22.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
22.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
22.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
22.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
21.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
21.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
21.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
21.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
21.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
21.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
20.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
20.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
20.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
20.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
20.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
20.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
20.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
20.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
20.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
20.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
20.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
19.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
19.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
19.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
19.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
19.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
19.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
19.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
19.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
19.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
19.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
19.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
19.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
19.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
18.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
18.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
18.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
18.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
18.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
18.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
18.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
18.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
17.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
17.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
17.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
17.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
17.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
17.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
17.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
17.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
17.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
17.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
17.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
17.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
17.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
17.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
17.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
17.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
17.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
17.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
17.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
17.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
17.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
17.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
16.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
16.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
16.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
16.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
16.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
16.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
16.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
16.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
16.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
16.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
16.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
16.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
16.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
16.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
15.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
15.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
15.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
15.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
15.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
15.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
15.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
15.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
15.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
15.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
15.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
15.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
15.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
14.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
14.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
14.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
14.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
14.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
14.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
14.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
14.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
14.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
14.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
14.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
14.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
14.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
14.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
13.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
13.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
13.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
13.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
13.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
13.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
13.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
13.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
13.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
13.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
13.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
13.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
13.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
12.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
12.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
12.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
12.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
12.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
12.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
12.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
12.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
12.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
12.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
12.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
12.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
12.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
12.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
12.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
11.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
11.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
11.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
11.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
11.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
11.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
11.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
11.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
11.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
11.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
11.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
11.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
11.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
11.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
11.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
11.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
11.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
11.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
11.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
11.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
11.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
11.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
11.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
11.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
11.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
11.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
10.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
10.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
10.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
10.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
10.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
10.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
10.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
10.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
10.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
10.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
10.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
10.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
10.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
10.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
10.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
10.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
10.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
10.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
10.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
10.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
10.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
10.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
10.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
10.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
10.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
9.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
9.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
9.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
9.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
9.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
9.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
9.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
9.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
9.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
9.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
9.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
9.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
9.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
9.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
9.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
9.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
9.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
9.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
9.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
9.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
9.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
9.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
9.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
9.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
9.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
9.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
8.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
8.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
8.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
8.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
8.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
8.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
8.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
8.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
8.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
8.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
8.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
8.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
8.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
8.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
8.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
7.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
7.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
7.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
7.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
7.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
7.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
7.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
7.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
7.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
7.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
7.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
7.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
7.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
7.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
7.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
7.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
7.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
7.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
7.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
7.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
6.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
6.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
6.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
6.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
6.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
6.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
6.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
6.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
6.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
6.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
5.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
5.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
5.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
5.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
5.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
5.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
5.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
5.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
5.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
5.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
5.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
5.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
5.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
5.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
5.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
4.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
4.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
4.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
4.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
4.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
4.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
3.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RMND5A is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.2
Number of samples
231
Samples
Sample
Description
TPM
DO45125
0 years, male, NA, stage:3, alive, 1680 days
48.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
44.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
43.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
41.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
37.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
34.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
34.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
30.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
30.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
29.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
27.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
27.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
27.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
27.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
27.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
27.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
27.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
26.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
26.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
26.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
26.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
25.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
25.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
24.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
24.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
24.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
24.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
24.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
24.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
24.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
23.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
23.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
23.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
22.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
22.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
21.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
21.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
20.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
20.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
20.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
20.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
20.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
20.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
20.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
20.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
19.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
19.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
19.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
19.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
19.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
19.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
19.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
19.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
18.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
18.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
18.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
18.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
18.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
18.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
18.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
18.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
17.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
17.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
17.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
17.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
17.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
17.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
17.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
17.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
17.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
17.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
16.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
16.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
16.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
16.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
16.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
16.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
16.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
16.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
16.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
16.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
16.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
16.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
16.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
15.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
15.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
15.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
15.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
15.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
15.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
15.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
15.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
15.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
14.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
14.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
14.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
14.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
14.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
14.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
14.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
14.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
14.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
14.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
14.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
14.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
14.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
14.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
13.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
13.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
13.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
13.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
13.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
13.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
13.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
13.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
13.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
13.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
13.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
13.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
13.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
13.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
13.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
13.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
13.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
13.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
13.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
13.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
13.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
12.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
12.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
12.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
12.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
12.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
12.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
12.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
12.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
12.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
12.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
12.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
12.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
12.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
12.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
12.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
12.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
12.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
12.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
12.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
12.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
12.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
11.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
11.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
11.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
11.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
11.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
11.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
11.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
11.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
11.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
11.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
11.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
11.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
11.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
11.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
11.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
11.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
11.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
11.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
10.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
10.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
10.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
10.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
10.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
10.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
10.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
10.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
10.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
10.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
10.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
10.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
10.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
10.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
10.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
9.9
DO48728
0 years, female, NA, stage:2, alive, 150 days
9.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
9.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
9.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
9.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
9.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
9.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
9.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
9.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
9.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
9.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
9.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
9.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
9.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
9.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
9.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
8.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
8.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
8.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
8.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
8.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
8.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
8.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
8.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
7.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
7.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
7.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
7.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
7.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
7.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
7.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
7.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
7.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
7.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
6.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
6.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
6.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
6.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
6.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
6.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
5.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
5.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
5.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
5.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
4.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
2.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
2.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
553
Tumor
0.8
863
Tumor
0.7
685
Tumor
0.7
1013
Tumor
0.7
473
Tumor
0.6
231
Tumor
0.6
493
Tumor
0.6
491
Tumor
0.6
517
Tumor
0.6
724
Normal
0.5
977
Tumor
0.5
147
Tumor
0.5
1025
Tumor
0.5
283
Tumor
0.5
957
Tumor
0.5
131
Tumor
0.5
777
Tumor
0.4
627
Tumor
0.4
141
Tumor
0.4
257
Tumor
0.4
497
Tumor
0.4
285
Tumor
0.4
1027
Tumor
0.4
743
Tumor
0.4
713
Tumor
0.4
877
Tumor
0.4
571
Tumor
0.4
355
Tumor
0.4
1031
Tumor
0.4
953
Tumor
0.4
1015
Tumor
0.4
965
Tumor
0.4
533
Tumor
0.4
515
Tumor
0.4
513
Tumor
0.4
951
Tumor
0.4
823
Tumor
0.4
1041
Tumor
0.3
483
Tumor
0.3
261
Tumor
0.3
567
Tumor
0.3
745
Tumor
0.3
861
Tumor
0.3
391
Tumor
0.3
715
Tumor
0.3
445
Tumor
0.3
557
Tumor
0.3
983
Tumor
0.3
267
Tumor
0.3
211
Tumor
0.3
785
Tumor
0.3
913
Tumor
0.3
721
Tumor
0.3
537
Tumor
0.3
963
Tumor
0.3
697
Tumor
0.3
387
Tumor
0.3
448
Normal
0.3
481
Tumor
0.3
357
Tumor
0.3
227
Tumor
0.2
527
Tumor
0.2
487
Tumor
0.2
221
Tumor
0.2
943
Tumor
0.2
817
Tumor
0.2
125
Tumor
0.2
641
Tumor
0.2
423
Tumor
0.2
975
Tumor
0.2
277
Tumor
0.2
663
Tumor
0.2
271
Tumor
0.2
213
Tumor
0.2
967
Tumor
0.2
1045
Tumor
0.2
1021
Tumor
0.2
471
Tumor
0.2
411
Tumor
0.2
978
Normal
0.2
865
Tumor
0.2
433
Tumor
0.2
123
Tumor
0.2
443
Tumor
0.2
741
Tumor
0.2
635
Tumor
0.2
137
Tumor
0.2
862
Normal
0.2
327
Tumor
0.2
563
Tumor
0.2
127
Tumor
0.2
313
Tumor
0.2
452
Normal
0.2
864
Normal
0.2
868
Normal
0.2
474
Normal
0.2
911
Tumor
0.2
958
Normal
0.2
786
Normal
0.2
966
Normal
0.2
661
Tumor
0.1
665
Tumor
0.1
536
Normal
0.1
647
Tumor
0.1
866
Normal
0.1
328
Normal
0.1
482
Normal
0.1
498
Normal
0.1
976
Normal
0.1
968
Normal
0.1
272
Normal
0.1
523
Tumor
0.1
1016
Normal
0.1
353
Tumor
0.1
412
Normal
0.1
722
Normal
0.1
1014
Normal
0.1
477
Tumor
0.1
468
Normal
0.1
284
Normal
0.1
343
Tumor
0.1
698
Normal
0.1
492
Normal
0.1
554
Normal
0.1
573
Tumor
0.1
1044
Normal
0.1
425
Tumor
0.1
494
Normal
0.1
742
Normal
0.1
1028
Normal
0.1
518
Normal
0.1
361
Tumor
0.1
356
Normal
0.1
228
Normal
0.1
617
Tumor
0.1
756
Normal
0.1
472
Normal
0.1
461
Tumor
0.1
964
Normal
0.1
422
Normal
0.1
111
Normal
0.1
524
Normal
0.1
873
Tumor
0.1
428
Normal
0.1
113
Tumor
0.1
538
Normal
0.1
746
Normal
0.1
1043
Tumor
0.1
1026
Normal
0.1
1042
Normal
0.1
852
Normal
0.1
451
Tumor
0.1
426
Normal
0.1
716
Normal
0.1
534
Normal
0.1
224
Normal
0.1
954
Normal
0.1
545
Tumor
0.1
671
Tumor
0.1
857
Tumor
0.1
427
Tumor
0.0
464
Normal
0.0
434
Normal
0.0
686
Normal
0.0
447
Tumor
0.0
636
Normal
0.0
124
Normal
0.0
737
Tumor
0.0
414
Normal
0.0
642
Normal
0.0
396
Normal
0.0
364
Normal
0.0
488
Normal
0.0
922
Normal
0.0
386
Normal
0.0
944
Normal
0.0
525
Tumor
0.0
917
Tumor
0.0
1046
Normal
0.0
714
Normal
0.0
558
Normal
0.0
755
Tumor
0.0
478
Normal
0.0
874
Normal
0.0
816
Normal
0.0
535
Tumor
0.0
738
Normal
0.0
982
Normal
0.0
126
Normal
0.0
416
Normal
0.0
546
Normal
0.0
375
Tumor
0.0
813
Tumor
0.0
1032
Normal
0.0
415
Tumor
0.0
814
Normal
0.0
1022
Normal
0.0
135
Tumor
0.0
431
Tumor
0.0
921
Tumor
0.0
446
Normal
0.0
526
Normal
0.0
424
Normal
0.0
191
Tumor
N/A
723
Tumor
0.0
344
Normal
0.0
956
Normal
0.0
884
Normal
0.0
188
Normal
0.0
436
Normal
0.0
142
Normal
0.0
878
Normal
0.0
463
Tumor
0.0
778
Normal
0.0
365
Tumor
0.0
955
Tumor
0.0
628
Normal
0.0
171
Tumor
0.0
728
Normal
0.0
456
Normal
0.0
662
Normal
0.0
952
Normal
0.0
881
Tumor
0.0
938
Normal
0.0
616
Normal
0.0
666
Normal
0.0
195
Tumor
0.0
984
Normal
0.0
393
Tumor
0.0
618
Normal
0.0
648
Normal
0.0
331
Tumor
0.0
572
Normal
0.0
421
Tumor
0.0
867
Tumor
0.0
912
Normal
0.0
368
Normal
0.0
514
Normal
0.0
385
Tumor
0.0
672
Normal
0.0
568
Normal
0.0
883
Tumor
0.0
923
Tumor
0.0
352
Normal
0.0
413
Tumor
0.0
926
Normal
0.0
262
Normal
0.0
192
Normal
-0.1
467
Tumor
-0.1
354
Normal
-0.1
484
Normal
-0.1
432
Normal
-0.1
136
Normal
-0.1
268
Normal
-0.1
363
Tumor
-0.1
818
Normal
-0.1
161
Tumor
-0.1
465
Tumor
-0.1
138
Normal
-0.1
664
Normal
-0.1
914
Normal
-0.1
851
Tumor
-0.1
351
Tumor
-0.1
132
Normal
-0.1
286
Normal
-0.1
466
Normal
-0.1
128
Normal
-0.1
516
Normal
-0.1
564
Normal
-0.1
358
Normal
-0.1
146
Normal
-0.1
392
Normal
-0.1
615
Tumor
-0.1
444
Normal
-0.1
212
Normal
-0.1
217
Tumor
-0.1
162
Normal
-0.1
362
Normal
-0.1
388
Normal
-0.1
462
Normal
-0.1
924
Normal
-0.1
232
Normal
-0.1
384
Normal
-0.1
383
Tumor
-0.1
435
Tumor
-0.1
916
Normal
-0.1
824
Normal
-0.1
918
Normal
-0.1
114
Normal
-0.1
148
Normal
-0.1
145
Tumor
-0.1
187
Tumor
-0.1
186
Normal
-0.1
858
Normal
-0.1
196
Normal
-0.1
341
Tumor
-0.1
278
Normal
-0.1
882
Normal
-0.1
394
Normal
-0.1
695
Tumor
-0.1
258
Normal
-0.2
214
Normal
-0.2
223
Tumor
-0.2
314
Normal
-0.2
222
Normal
-0.2
298
Normal
-0.2
376
Normal
-0.2
112
Tumor
-0.2
696
Normal
-0.2
366
Normal
-0.2
925
Tumor
-0.2
528
Normal
-0.2
185
Tumor
-0.2
172
Normal
-0.2
727
Tumor
-0.2
218
Normal
-0.2
395
Tumor
-0.2
332
Normal
-0.2
342
Normal
-0.2
815
Tumor
-0.2
981
Tumor
-0.2
367
Tumor
-0.3
312
Normal
-0.3
574
Normal
-0.3
744
Normal
-0.3
297
Tumor
-0.3
455
Tumor
-0.3
915
Tumor
-0.3
937
Tumor
-0.4
311
Tumor
-0.4
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.