HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:13.1 nTPM
HPA Brain:29.5 nTPM
GTEx:13.1 nTPM
FANTOM5:133.4 Scaled Tags Per Million
Pig:52.0 nTPM
Mouse:23.3 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008751Antibody CAB005227
Glial cells MediumLow
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 29.5
Sample id Sample description nTPM
Hippocampus
nTPM: 27.6
1898 Male, age 80, left hemisphere 31.7
2529 Female, age 94, left hemisphere 30.5
1911 Female, age 85, right hemisphere 27.9
2621 Female, age 67, right hemisphere 26.3
2148 Female, age 91, left hemisphere 25.7
1855 Male, age 76, left hemisphere 23.5
Dentate gyrus
nTPM: 27.0
2530 Female, age 94, left hemisphere 30.5
2010 Male, age 76, both hemispheres 29.8
2528 Male, age 74, both hemispheres 26.3
1927 Female, age 91, both hemispheres 26.1
2246 Female, age 85, both hemispheres 26.1
2531 Female, age 67, both hemispheres 22.9
Entorhinal gyrus
nTPM: 26.4
2117 Female, age 91, right hemisphere 32.1
1938 Female, age 85, left hemisphere 28.2
2686 Male, age 75, right hemisphere 26.8
2764 Male, age 80, right hemisphere 25.2
1787 Male, age 76, left hemisphere 24.5
2613 Female, age 94, left hemisphere 21.7
Hippocampus, CA1
nTPM: 26.7
1873 Female, age 85, both hemispheres 30.3
2749 Male, age 80, left hemisphere 28.8
2527 Male, age 74, both hemispheres 28.4
2082 Female, age 91, right hemisphere 25.2
2045 Male, age 76, both hemispheres 21.1
Hippocampus, CA2
nTPM: 28.1
2249 Male, age 74, both hemispheres 29.8
1963 Male, age 80, left hemisphere 29.5
1940 Female, age 85, left hemisphere 28.8
2113 Female, age 91, right hemisphere 27.4
2437 Female, age 94, left hemisphere 27.0
1892 Male, age 76, both hemispheres 26.5
Hippocampus, CA3
nTPM: 24.8
1891 Female, age 85, both hemispheres 31.0
1867 Male, age 76, both hemispheres 27.1
2436 Male, age 74, both hemispheres 26.4
2137 Male, age 80, left hemisphere 24.3
2861 Female, age 67, both hemispheres 20.3
2620 Female, age 94, left hemisphere 19.6
Parahippocampal cortex
nTPM: 26.4
1850 Male, age 80, both hemispheres 29.2
1933 Female, age 85, both hemispheres 28.1
2532 Female, age 72, left hemisphere 28.0
1990 Female, age 91, right hemisphere 27.5
2245 Female, age 91, both hemispheres 27.0
2018 Male, age 76, both hemispheres 26.9
2692 Male, age 74, both hemispheres 26.9
2250 Female, age 67, right hemisphere 24.6
2693 Female, age 94, both hemispheres 23.9
2622 Female, age 67, right hemisphere 22.1
Perirhinal gyrus
nTPM: 26.0
1841 Female, age 85, right hemisphere 29.1
1794 Male, age 80, right hemisphere 27.3
1847 Female, age 91, left hemisphere 25.6
2521 Female, age 94, right hemisphere 24.4
2848 Male, age 76, right hemisphere 23.5
Subiculum
nTPM: 29.5
2042 Male, age 76, both hemispheres 32.4
1901 Male, age 80, both hemispheres 31.1
2438 Female, age 94, left hemisphere 30.9
1977 Female, age 85, both hemispheres 29.1
2619 Male, age 74, both hemispheres 26.7
2729 Female, age 91, right hemisphere 26.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 13.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.1
Samples: 197

Max nTPM: 22.0
Min nTPM: 8.0
Std nTPM: 2.9
Median nTPM: 12.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 22.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 21.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 20.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 20.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 20.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 20.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 19.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 19.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 19.0
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 18.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 18.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 133.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 133.4
FF:10169-103B7 60 years, female 133.9
FF:10153-102I9 76 years, female 132.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 52.0
Pig sample Sample description nTPM
Subiculum
nTPM: 44.9
Samples: 4

Max nTPM: 53.6
Min nTPM: 40.8
Sample A Female 53.6
Sample B Female 40.8
Sample C Male 42.6
Sample D Male 42.7
Dorsal hippocampus
nTPM: 52.0
Samples: 4

Max nTPM: 62.8
Min nTPM: 42.1
Sample A Female 62.8
Sample B Female 48.6
Sample C Male 54.6
Sample D Male 42.1
Entorhinal cortex
nTPM: 41.6
Samples: 4

Max nTPM: 44.9
Min nTPM: 39.0
Sample A Female 42.8
Sample B Female 44.9
Sample C Male 39.0
Sample D Male 39.6
Ventral hippocampus
nTPM: 44.9
Samples: 4

Max nTPM: 55.5
Min nTPM: 37.0
Sample A Female 55.5
Sample B Female 37.0
Sample C Male 39.3
Sample D Male 47.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 23.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.7
Samples: 4

Max nTPM: 23.2
Min nTPM: 21.5
Sample A Male 23.0
Sample B Male 23.2
Sample C Female 21.5
Sample D Female 23.1
Hippocampal formation
nTPM: 23.3
Samples: 4

Max nTPM: 25.9
Min nTPM: 21.7
Sample A Male 21.7
Sample B Male 23.9
Sample C Female 25.9
Sample D Female 21.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
68799155 Antisense, RP_050217_02_B08, Mouse strain C57BL/6J (56 days, male) 4.4

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