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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZFP36L2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
177.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
172.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
151.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
133.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
122.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
111.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
110.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
107.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
101.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
100.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
98.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
93.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
93.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
93.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
89.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
89.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
88.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
87.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
86.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
81.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
81.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
77.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
77.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
75.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
75.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
73.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
71.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
70.8
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
70.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
70.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
69.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
69.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
66.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
64.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
64.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
62.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
61.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
60.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
60.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
60.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
60.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
60.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
58.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
58.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
57.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
57.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
56.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
56.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
56.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
56.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
55.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
55.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
55.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
55.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
55.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
55.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
54.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
54.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
53.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
53.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
53.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
53.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
52.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
52.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
52.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
51.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
51.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
48.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
48.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
48.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
47.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
47.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
46.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
46.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
45.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
45.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
44.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
44.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
43.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
43.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
43.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
42.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
42.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
42.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
42.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
42.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
42.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
42.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
42.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
41.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
40.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
40.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
40.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
39.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
39.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
39.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
38.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
38.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
38.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
37.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
37.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
37.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
37.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
37.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
37.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
37.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
37.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
36.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
36.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
36.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
36.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
36.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
35.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
35.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
35.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
35.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
35.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
35.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
34.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
34.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
34.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
34.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
33.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
33.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
33.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
33.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
33.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
33.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
33.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
33.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
33.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
32.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
32.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
32.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
32.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
32.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
32.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
32.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
32.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
31.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
31.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
31.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
31.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
30.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
30.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
30.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
30.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
30.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
30.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
30.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
30.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
30.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
30.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
30.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
30.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
29.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
29.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
29.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
29.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
29.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
29.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
29.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
29.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
29.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
28.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
28.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
28.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
27.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
27.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
27.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
27.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
27.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
27.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
27.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
27.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
27.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
27.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
27.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
27.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
26.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
26.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
26.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
26.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
26.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
26.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
26.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
26.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
26.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
26.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
26.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
26.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
26.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
26.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
26.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
26.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
26.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
26.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
25.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
25.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
25.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
25.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
25.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
25.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
25.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
24.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
24.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
24.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
24.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
24.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
24.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
24.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
24.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
24.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
24.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
24.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
24.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
23.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
23.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
23.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
23.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
23.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
23.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
23.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
23.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
23.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
23.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
23.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
22.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
22.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
22.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
22.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
22.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
22.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
22.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
22.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
21.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
21.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
21.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
21.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
21.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
21.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
21.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
21.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
21.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
21.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
21.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
21.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
20.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
20.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
20.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
20.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
20.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
20.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
20.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
20.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
20.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
20.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
20.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
20.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
20.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
20.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
20.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
19.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
19.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
19.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
19.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
19.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
19.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
19.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
19.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
18.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
18.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
18.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
18.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
18.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
18.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
18.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
18.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
18.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
17.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
17.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
17.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
17.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
17.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
17.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
17.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
17.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
17.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
17.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
17.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
17.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
16.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
16.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
16.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
16.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
16.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
16.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
16.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
16.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
15.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
15.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
15.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
15.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
15.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
15.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
15.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
15.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
15.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
15.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
15.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
15.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
15.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
15.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
15.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
14.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
14.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
14.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
14.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
14.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
14.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
14.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
14.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
14.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
13.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
13.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
13.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
13.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
13.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
13.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
12.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
12.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
12.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
12.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
12.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
11.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
11.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
11.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
11.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
11.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
11.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
11.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
11.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
11.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
11.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
10.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
10.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
10.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
10.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
9.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
9.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
9.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
9.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
9.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
8.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
8.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
8.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
7.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
7.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
7.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
6.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
5.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZFP36L2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.8
Number of samples
231
Samples
Sample
Description
TPM
DO45133
0 years, male, NA, stage:3, dead, 660 days
294.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
190.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
187.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
179.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
161.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
154.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
153.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
144.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
141.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
135.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
133.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
129.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
129.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
128.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
127.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
121.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
121.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
120.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
116.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
109.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
101.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
100.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
96.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
96.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
94.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
93.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
90.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
87.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
86.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
85.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
80.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
78.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
78.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
77.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
77.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
77.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
77.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
75.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
73.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
69.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
67.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
67.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
67.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
65.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
65.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
64.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
64.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
63.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
63.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
62.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
62.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
62.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
61.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
60.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
59.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
59.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
59.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
58.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
58.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
58.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
58.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
57.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
57.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
54.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
54.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
53.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
52.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
52.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
51.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
51.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
51.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
51.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
51.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
51.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
50.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
50.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
50.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
49.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
49.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
49.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
49.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
48.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
47.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
47.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
47.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
47.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
46.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
46.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
45.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
45.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
45.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
44.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
44.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
44.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
44.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
44.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
43.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
43.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
43.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
42.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
42.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
42.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
42.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
42.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
42.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
41.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
41.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
41.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
41.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
41.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
41.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
40.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
40.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
40.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
40.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
40.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
40.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
39.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
39.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
38.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
38.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
38.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
38.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
38.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
38.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
38.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
38.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
38.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
36.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
36.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
36.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
36.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
36.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
36.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
35.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
35.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
35.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
35.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
35.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
35.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
34.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
34.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
34.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
34.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
34.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
33.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
33.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
33.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
33.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
33.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
32.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
32.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
32.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
31.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
31.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
31.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
31.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
31.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
30.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
30.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
30.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
30.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
30.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
30.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
30.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
29.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
29.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
29.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
29.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
28.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
28.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
28.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
28.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
28.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
27.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
27.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
27.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
27.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
27.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
27.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
27.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
26.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
26.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
26.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
26.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
26.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
25.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
25.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
25.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
25.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
24.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
24.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
24.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
24.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
23.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
23.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
22.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
22.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
22.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
21.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
21.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
21.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
20.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
20.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
20.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
20.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
20.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
20.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
20.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
19.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
19.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
19.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
19.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
19.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
18.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
18.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
18.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
18.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
17.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
17.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
17.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
17.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
16.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
16.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
15.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
15.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
13.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
13.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
13.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
12.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
12.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
743
Tumor
1.2
911
Tumor
0.9
571
Tumor
0.8
464
Normal
0.7
368
Normal
0.6
366
Normal
0.6
131
Tumor
0.6
145
Tumor
0.5
924
Normal
0.5
868
Normal
0.5
452
Normal
0.5
661
Tumor
0.5
285
Tumor
0.4
456
Normal
0.4
867
Tumor
0.4
864
Normal
0.4
422
Normal
0.4
786
Normal
0.4
861
Tumor
0.4
756
Normal
0.4
642
Normal
0.4
913
Tumor
0.4
824
Normal
0.4
741
Tumor
0.4
312
Normal
0.4
395
Tumor
0.4
1022
Normal
0.4
1025
Tumor
0.4
572
Normal
0.4
951
Tumor
0.4
728
Normal
0.4
468
Normal
0.4
912
Normal
0.4
664
Normal
0.3
1021
Tumor
0.3
648
Normal
0.3
744
Normal
0.3
567
Tumor
0.3
385
Tumor
0.3
557
Tumor
0.3
852
Normal
0.3
857
Tumor
0.3
818
Normal
0.3
955
Tumor
0.3
363
Tumor
0.3
727
Tumor
0.3
697
Tumor
0.3
968
Normal
0.3
944
Normal
0.3
535
Tumor
0.3
954
Normal
0.3
376
Normal
0.3
1032
Normal
0.3
884
Normal
0.3
1046
Normal
0.3
755
Tumor
0.3
665
Tumor
0.3
823
Tumor
0.3
915
Tumor
0.3
367
Tumor
0.3
231
Tumor
0.3
666
Normal
0.3
866
Normal
0.3
451
Tumor
0.2
882
Normal
0.2
361
Tumor
0.2
448
Normal
0.2
365
Tumor
0.2
943
Tumor
0.2
785
Tumor
0.2
444
Normal
0.2
698
Normal
0.2
342
Normal
0.2
1026
Normal
0.2
428
Normal
0.2
618
Normal
0.2
564
Normal
0.2
956
Normal
0.2
671
Tumor
0.2
568
Normal
0.2
384
Normal
0.2
278
Normal
0.2
862
Normal
0.2
574
Normal
0.2
1045
Tumor
0.2
816
Normal
0.2
918
Normal
0.2
746
Normal
0.2
191
Tumor
0.2
1028
Normal
0.2
362
Normal
0.2
364
Normal
0.2
354
Normal
0.2
192
Normal
0.2
628
Normal
0.2
358
Normal
0.2
851
Tumor
0.2
471
Tumor
0.2
1041
Tumor
0.2
461
Tumor
0.2
1042
Normal
0.2
952
Normal
0.2
883
Tumor
0.2
224
Normal
0.2
135
Tumor
0.2
724
Normal
0.2
426
Normal
0.2
518
Normal
0.2
222
Normal
0.2
534
Normal
0.2
1031
Tumor
0.2
777
Tumor
0.1
474
Normal
0.1
615
Tumor
0.1
466
Normal
0.1
171
Tumor
0.1
413
Tumor
0.1
742
Normal
0.1
873
Tumor
0.1
195
Tumor
0.1
465
Tumor
0.1
424
Normal
0.1
146
Normal
0.1
723
Tumor
0.1
877
Tumor
0.1
262
Normal
0.1
938
Normal
0.1
267
Tumor
0.1
858
Normal
0.1
138
Normal
0.1
627
Tumor
0.1
147
Tumor
0.1
738
Normal
0.1
874
Normal
0.1
647
Tumor
0.1
223
Tumor
0.1
713
Tumor
0.1
672
Normal
0.1
814
Normal
0.1
745
Tumor
0.1
434
Normal
0.1
558
Normal
0.1
662
Normal
0.1
351
Tumor
0.1
881
Tumor
0.1
187
Tumor
0.1
218
Normal
0.1
258
Normal
0.1
526
Normal
0.1
922
Normal
0.1
966
Normal
0.1
926
Normal
0.1
982
Normal
0.1
663
Tumor
0.1
1043
Tumor
0.1
357
Tumor
0.1
411
Tumor
0.1
435
Tumor
0.1
111
Normal
0.1
695
Tumor
0.1
311
Tumor
0.1
286
Normal
0.1
1044
Normal
0.1
128
Normal
0.1
878
Normal
0.1
714
Normal
0.1
416
Normal
0.1
386
Normal
0.1
965
Tumor
0.1
123
Tumor
0.0
391
Tumor
0.0
545
Tumor
0.0
478
Normal
0.0
283
Tumor
0.0
472
Normal
0.0
277
Tumor
0.0
447
Tumor
0.0
412
Normal
0.0
132
Normal
0.0
341
Tumor
0.0
161
Tumor
0.0
737
Tumor
0.0
778
Normal
0.0
331
Tumor
0.0
261
Tumor
0.0
462
Normal
0.0
865
Tumor
0.0
127
Tumor
0.0
716
Normal
0.0
352
Normal
0.0
958
Normal
0.0
344
Normal
0.0
353
Tumor
0.0
213
Tumor
0.0
214
Normal
0.0
126
Normal
0.0
113
Tumor
0.0
272
Normal
0.0
515
Tumor
0.0
636
Normal
0.0
981
Tumor
0.0
1027
Tumor
0.0
482
Normal
0.0
356
Normal
0.0
546
Normal
0.0
284
Normal
0.0
114
Normal
0.0
393
Tumor
0.0
297
Tumor
0.0
554
Normal
0.0
328
Normal
0.0
516
Normal
0.0
212
Normal
0.0
271
Tumor
0.0
217
Tumor
0.0
721
Tumor
0.0
953
Tumor
0.0
228
Normal
0.0
112
Tumor
0.0
227
Tumor
0.0
964
Normal
0.0
463
Tumor
0.0
963
Tumor
0.0
432
Normal
0.0
573
Tumor
0.0
298
Normal
0.0
1016
Normal
0.0
494
Normal
0.0
185
Tumor
0.0
473
Tumor
0.0
148
Normal
0.0
141
Tumor
0.0
142
Normal
-0.1
635
Tumor
-0.1
536
Normal
-0.1
383
Tumor
-0.1
498
Normal
-0.1
914
Normal
-0.1
446
Normal
-0.1
375
Tumor
-0.1
421
Tumor
-0.1
696
Normal
-0.1
436
Normal
-0.1
967
Tumor
-0.1
423
Tumor
-0.1
396
Normal
-0.1
414
Normal
-0.1
537
Tumor
-0.1
492
Normal
-0.1
415
Tumor
-0.1
392
Normal
-0.1
817
Tumor
-0.1
221
Tumor
-0.1
525
Tumor
-0.1
484
Normal
-0.1
124
Normal
-0.1
162
Normal
-0.1
483
Tumor
-0.1
327
Tumor
-0.1
467
Tumor
-0.1
921
Tumor
-0.1
455
Tumor
-0.1
813
Tumor
-0.1
984
Normal
-0.1
1014
Normal
-0.1
196
Normal
-0.1
976
Normal
-0.1
916
Normal
-0.1
513
Tumor
-0.1
863
Tumor
-0.1
563
Tumor
-0.1
481
Tumor
-0.1
232
Normal
-0.1
497
Tumor
-0.1
433
Tumor
-0.1
493
Tumor
-0.1
975
Tumor
-0.1
137
Tumor
-0.1
815
Tumor
-0.1
616
Normal
-0.1
1013
Tumor
-0.1
332
Normal
-0.2
136
Normal
-0.2
268
Normal
-0.2
431
Tumor
-0.2
188
Normal
-0.2
445
Tumor
-0.2
517
Tumor
-0.2
978
Normal
-0.2
524
Normal
-0.2
427
Tumor
-0.2
387
Tumor
-0.2
394
Normal
-0.2
715
Tumor
-0.2
722
Normal
-0.2
125
Tumor
-0.2
186
Normal
-0.2
355
Tumor
-0.2
538
Normal
-0.2
172
Normal
-0.2
553
Tumor
-0.2
977
Tumor
-0.2
314
Normal
-0.2
477
Tumor
-0.2
685
Tumor
-0.3
686
Normal
-0.3
528
Normal
-0.3
514
Normal
-0.3
487
Tumor
-0.3
257
Tumor
-0.3
925
Tumor
-0.3
1015
Tumor
-0.3
923
Tumor
-0.3
957
Tumor
-0.3
491
Tumor
-0.3
388
Normal
-0.3
983
Tumor
-0.3
488
Normal
-0.3
937
Tumor
-0.3
211
Tumor
-0.4
527
Tumor
-0.4
443
Tumor
-0.4
425
Tumor
-0.4
533
Tumor
-0.4
617
Tumor
-0.4
641
Tumor
-0.5
313
Tumor
-0.5
343
Tumor
-0.5
917
Tumor
-0.6
523
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
