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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPOCK1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
111.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
106.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
87.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
75.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
51.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
43.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
37.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
35.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
22.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
21.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
20.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
18.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
17.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
16.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
15.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
10.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
10.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
9.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
9.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
7.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
7.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
6.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
5.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
5.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
3.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
3.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
3.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
2.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
2.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
2.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
2.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
2.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
2.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
2.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
2.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
2.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
1.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
1.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
1.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
1.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
1.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
1.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPOCK1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
829.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
351.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
314.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
278.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
215.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
205.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
199.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
197.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
156.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
155.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
154.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
152.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
144.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
142.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
142.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
140.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
117.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
111.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
108.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
105.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
101.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
101.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
100.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
100.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
97.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
94.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
93.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
93.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
91.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
91.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
90.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
90.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
87.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
82.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
81.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
77.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
76.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
73.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
72.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
67.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
67.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
64.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
64.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
63.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
62.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
62.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
60.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
58.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
57.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
55.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
55.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
53.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
53.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
52.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
52.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
52.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
51.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
51.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
51.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
51.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
50.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
49.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
49.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
48.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
48.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
47.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
46.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
46.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
46.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
45.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
45.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
44.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
44.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
42.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
42.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
42.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
42.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
42.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
42.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
42.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
42.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
41.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
41.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
39.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
39.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
39.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
39.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
38.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
38.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
37.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
37.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
37.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
37.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
36.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
36.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
36.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
34.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
34.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
34.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
34.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
33.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
33.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
33.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
33.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
32.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
31.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
31.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
30.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
30.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
29.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
29.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
29.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
29.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
29.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
28.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
28.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
27.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
27.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
27.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
27.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
27.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
26.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
26.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
26.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
26.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
26.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
26.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
26.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
25.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
25.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
25.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
25.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
24.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
24.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
24.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
24.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
24.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
23.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
23.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
23.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
23.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
22.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
22.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
22.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
21.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
21.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
21.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
21.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
21.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
21.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
21.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
20.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
20.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
20.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
20.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
19.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
19.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
19.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
19.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
19.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
19.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
18.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
18.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
18.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
18.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
18.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
18.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
18.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
18.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
18.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
17.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
17.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
17.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
17.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
17.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
16.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
16.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
16.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
15.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
15.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
15.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
15.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
15.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
15.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
15.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
14.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
14.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
14.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
14.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
14.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
14.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
14.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
14.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
13.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
13.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
13.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
13.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
13.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
13.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
13.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
13.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
13.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
13.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
13.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
13.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
12.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
12.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
12.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
12.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
12.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
12.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
12.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
12.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
11.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
11.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
11.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
11.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
11.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
11.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
10.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
10.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
10.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
10.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
10.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
10.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
10.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
10.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
10.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
9.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
9.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
9.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
9.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
9.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
9.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
8.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
8.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
8.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
8.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
8.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
8.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
8.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
8.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
8.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
8.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
7.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
7.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
7.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
7.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
7.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
7.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
7.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
7.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
7.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
7.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
7.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
7.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
6.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
6.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
6.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
6.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
6.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
6.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
6.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
6.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
6.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
6.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
6.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
6.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
6.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
6.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
6.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
5.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
5.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
5.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
5.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
5.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
5.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
5.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
5.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
4.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
4.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
4.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
4.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
4.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
4.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
4.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
4.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
4.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
4.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
4.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
4.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
4.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
4.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
4.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
4.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
4.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
4.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
4.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
4.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
4.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
4.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
4.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
4.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
4.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
4.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
4.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
4.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
4.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
4.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
3.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
3.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
3.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
3.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
3.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
3.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
3.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
3.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
3.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
3.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
3.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
3.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
3.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
3.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
3.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
3.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
3.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
3.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
3.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
3.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
3.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
3.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
3.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
3.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
3.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
3.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
3.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
2.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
2.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
2.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
2.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
2.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
2.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
2.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
2.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
2.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
2.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
2.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
2.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
2.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
2.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
2.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
2.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
2.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
2.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
2.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
2.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
2.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
2.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
2.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
2.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
2.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
2.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
2.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
2.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
2.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
2.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
2.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
2.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
2.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
2.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
2.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
2.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
2.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
2.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
2.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
1.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
1.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
1.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
1.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
1.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
1.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
1.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
1.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
1.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
1.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
1.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
1.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
1.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
1.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
1.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
1.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
1.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
1.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
1.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
1.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
1.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
1.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
1.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
1.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
1.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
1.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
1.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
1.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
1.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
1.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
1.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
1.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
1.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
1.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
1.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
1.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
1.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
1.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
1.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
1.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
1.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
1.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
1.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
1.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
1.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
1.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
1.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
1.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
1.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
1.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
1.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
1.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
1.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
1.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
1.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
1.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
0.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
0.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
0.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
0.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
0.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
0.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
0.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
0.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
0.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
0.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
0.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
0.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
0.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
0.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
0.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
0.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
0.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
0.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
0.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
0.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
0.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
0.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
0.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
0.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
0.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
0.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
0.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
0.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
0.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
0.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
0.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
0.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
0.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
0.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
0.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
0.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
0.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPOCK1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
198.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
136.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
135.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
128.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
110.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
82.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
73.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
65.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
56.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
56.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
54.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
54.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
52.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
49.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
47.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
46.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
46.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
46.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
45.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
39.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
38.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
37.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
35.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
34.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
34.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
32.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
29.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
29.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
27.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
27.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
24.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
23.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
22.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
18.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
18.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
16.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
15.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
15.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
13.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
13.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
12.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
12.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
12.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
11.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
11.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
11.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
8.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
8.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
7.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
7.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
6.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
6.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
5.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
4.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
4.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
4.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
3.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
3.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
3.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
3.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
3.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
3.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
2.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
2.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
2.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
2.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
2.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
1.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
1.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
1.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
1.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
1.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
1.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
1.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
1.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
0.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
0.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
0.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
0.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
0.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
0.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
0.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
0.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
0.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
0.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
0.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
0.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
0.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
0.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
0.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
0.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
0.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPOCK1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
330.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
277.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
134.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
127.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
121.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
119.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
118.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
113.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
109.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
101.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
98.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
89.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
87.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
86.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
78.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
77.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
65.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
65.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
63.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
62.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
61.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
59.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
56.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
55.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
54.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
53.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
52.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
52.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
52.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
51.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
50.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
50.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
49.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
47.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
43.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
41.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
41.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
41.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
41.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
41.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
37.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
35.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
35.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
33.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
33.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
33.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
32.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
31.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
31.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
31.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
29.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
28.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
28.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
27.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
27.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
26.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
26.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
26.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
26.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
26.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
25.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
25.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
24.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
24.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
23.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
23.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
22.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
22.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
22.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
22.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
21.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
21.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
21.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
21.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
20.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
20.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
20.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
19.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
19.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
19.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
19.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
18.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
18.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
18.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
18.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
17.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
17.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
17.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
17.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
17.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
17.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
16.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
16.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
15.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
15.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
15.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
14.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
14.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
14.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
14.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
13.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
13.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
13.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
13.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
13.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
13.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
13.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
13.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
13.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
12.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
12.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
12.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
12.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
12.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
11.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
11.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
11.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
11.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
11.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
11.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
11.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
11.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
11.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
11.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
11.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
11.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
11.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
11.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
11.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
11.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
10.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
10.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
10.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
9.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
9.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
9.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
9.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
9.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
9.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
9.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
9.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
8.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
8.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
8.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
8.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
8.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
8.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
8.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
7.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
7.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
7.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
7.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
7.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
7.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
7.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
7.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
6.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
6.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
6.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
6.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
6.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
6.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
6.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
6.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
5.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
5.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
5.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
5.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
5.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
5.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
5.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
5.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
5.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
5.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
5.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
4.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
4.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
4.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
4.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
4.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
4.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
3.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
3.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
3.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
3.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
3.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
3.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
3.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
3.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
3.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
2.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
2.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
2.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
2.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
2.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
2.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
2.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
2.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
2.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
1.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
1.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
1.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
1.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
1.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
1.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
1.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
1.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
1.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
1.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
1.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
1.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
0.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
0.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
0.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
0.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
0.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002350011
Tumor
2.7
CPT0014370004
Tumor
1.7
CPT0076330003
Tumor
1.7
CPT0007860003
Tumor
0.6
CPT0063630003
Tumor
0.6
CPT0077140001
Normal
0.0
CPT0002370001
Normal
-0.1
CPT0088780001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0001270001
Normal
-0.3
CPT0088760003
Tumor
-0.3
CPT0079000001
Normal
-0.4
CPT0063640001
Normal
-0.4
CPT0001260009
Tumor
-0.4
CPT0019160001
Normal
-0.6
CPT0088690003
Tumor
-0.6
CPT0000890001
Normal
-0.7
CPT0014350001
Normal
-0.7
CPT0078990003
Tumor
-0.7
CPT0000870016
Tumor
-0.8
CPT0077110003
Tumor
-0.9
CPT0019130003
Tumor
-1.1
CPT0026410003
Tumor
N/A
CPT0000790001
Normal
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
