HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:3.9 nTPM
HPA Brain:17.2 nTPM
GTEx:3.9 nTPM
FANTOM5:52.9 Scaled Tags Per Million
Pig:10.4 nTPM
Mouse:6.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003934
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 17.2
Sample id Sample description nTPM
Hippocampus
nTPM: 14.7
1898 Male, age 80, left hemisphere 18.6
1911 Female, age 85, right hemisphere 15.6
1855 Male, age 76, left hemisphere 15.3
2148 Female, age 91, left hemisphere 13.2
2529 Female, age 94, left hemisphere 12.8
2621 Female, age 67, right hemisphere 12.8
Dentate gyrus
nTPM: 14.7
1927 Female, age 91, both hemispheres 18.0
2010 Male, age 76, both hemispheres 16.8
2528 Male, age 74, both hemispheres 14.9
2246 Female, age 85, both hemispheres 14.3
2530 Female, age 94, left hemisphere 12.8
2531 Female, age 67, both hemispheres 11.2
Entorhinal gyrus
nTPM: 13.7
1938 Female, age 85, left hemisphere 17.4
1787 Male, age 76, left hemisphere 14.2
2764 Male, age 80, right hemisphere 13.7
2117 Female, age 91, right hemisphere 13.6
2613 Female, age 94, left hemisphere 12.4
2686 Male, age 75, right hemisphere 10.6
Hippocampus, CA1
nTPM: 16.8
2749 Male, age 80, left hemisphere 24.6
1873 Female, age 85, both hemispheres 18.6
2045 Male, age 76, both hemispheres 14.3
2082 Female, age 91, right hemisphere 13.7
2527 Male, age 74, both hemispheres 12.9
Hippocampus, CA2
nTPM: 15.8
1892 Male, age 76, both hemispheres 19.6
1963 Male, age 80, left hemisphere 19.5
2249 Male, age 74, both hemispheres 15.3
1940 Female, age 85, left hemisphere 14.3
2113 Female, age 91, right hemisphere 13.3
2437 Female, age 94, left hemisphere 12.5
Hippocampus, CA3
nTPM: 14.5
2137 Male, age 80, left hemisphere 20.8
1867 Male, age 76, both hemispheres 16.0
1891 Female, age 85, both hemispheres 15.0
2436 Male, age 74, both hemispheres 13.9
2620 Female, age 94, left hemisphere 11.8
2861 Female, age 67, both hemispheres 9.4
Parahippocampal cortex
nTPM: 15.1
1850 Male, age 80, both hemispheres 19.7
1933 Female, age 85, both hemispheres 16.0
2693 Female, age 94, both hemispheres 15.7
2250 Female, age 67, right hemisphere 15.6
1990 Female, age 91, right hemisphere 15.0
2532 Female, age 72, left hemisphere 15.0
2018 Male, age 76, both hemispheres 14.9
2245 Female, age 91, both hemispheres 13.9
2692 Male, age 74, both hemispheres 13.7
2622 Female, age 67, right hemisphere 11.6
Perirhinal gyrus
nTPM: 17.2
1841 Female, age 85, right hemisphere 18.6
1847 Female, age 91, left hemisphere 18.2
2848 Male, age 76, right hemisphere 17.2
1794 Male, age 80, right hemisphere 17.0
2521 Female, age 94, right hemisphere 14.9
Subiculum
nTPM: 14.2
2042 Male, age 76, both hemispheres 15.8
1901 Male, age 80, both hemispheres 15.0
1977 Female, age 85, both hemispheres 14.6
2438 Female, age 94, left hemisphere 14.1
2619 Male, age 74, both hemispheres 12.8
2729 Female, age 91, right hemisphere 12.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.9
Samples: 197

Max nTPM: 8.7
Min nTPM: 1.5
Std nTPM: 1.3
Median nTPM: 3.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 8.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 8.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 8.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 8.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 7.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 7.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 6.8
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 6.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 6.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 6.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 6.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 52.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.9
FF:10169-103B7 60 years, female 68.5
FF:10153-102I9 76 years, female 37.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 10.4
Pig sample Sample description nTPM
Subiculum
nTPM: 9.4
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.8
Sample A Female 8.8
Sample B Female 10.3
Sample C Male 8.9
Sample D Male 9.7
Dorsal hippocampus
nTPM: 9.2
Samples: 4

Max nTPM: 10.4
Min nTPM: 8.1
Sample A Female 8.1
Sample B Female 9.0
Sample C Male 10.4
Sample D Male 9.3
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 12.3
Min nTPM: 8.2
Sample A Female 8.2
Sample B Female 12.3
Sample C Male 10.5
Sample D Male 10.5
Ventral hippocampus
nTPM: 8.7
Samples: 4

Max nTPM: 10.4
Min nTPM: 6.3
Sample A Female 9.7
Sample B Female 10.4
Sample C Male 6.3
Sample D Male 8.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 6.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 6.7
Min nTPM: 4.3
Sample A Male 6.7
Sample B Male 6.4
Sample C Female 5.9
Sample D Female 4.3
Hippocampal formation
nTPM: 6.2
Samples: 4

Max nTPM: 7.7
Min nTPM: 4.9
Sample A Male 7.7
Sample B Male 6.4
Sample C Female 5.9
Sample D Female 4.9

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