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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NBAS is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
113.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
66.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
42.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
41.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
41.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
40.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
37.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
36.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
36.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
36.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
34.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
33.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
33.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
31.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
31.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
31.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
30.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
29.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
29.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
29.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
29.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
29.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
28.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
28.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
27.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
27.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
27.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
26.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
26.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
25.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
25.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
25.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
24.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
24.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
24.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
24.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
24.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
24.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
24.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
24.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
24.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
24.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
24.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
23.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
23.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
23.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
23.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
22.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
22.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
22.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
22.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
22.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
22.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
22.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
22.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
22.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
22.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
22.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
22.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
22.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
21.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
21.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
21.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
21.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
21.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
21.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
21.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
21.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
21.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
20.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
20.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
20.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
20.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
20.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
20.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
20.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
20.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
20.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
20.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
20.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
20.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
20.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
19.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
19.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
19.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
19.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
19.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
19.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
19.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
19.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
19.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
19.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
19.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
18.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
18.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
18.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
18.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
18.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
18.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
18.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
18.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
18.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
18.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
18.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
18.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
18.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
18.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
18.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
17.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
17.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
17.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
17.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
17.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
17.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
17.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
17.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
17.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
17.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
17.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
17.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
17.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
17.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
17.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
17.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
17.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
17.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
17.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
17.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
16.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
16.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
16.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
16.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
16.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
16.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
16.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
16.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
16.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
16.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
16.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
16.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
16.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
16.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
16.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
16.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
16.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
16.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
16.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
16.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
16.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
16.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
15.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
15.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
15.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
15.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
15.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
15.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
15.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
15.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
15.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
15.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
15.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
15.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
15.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
15.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
15.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
15.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
15.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
15.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
15.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
15.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
15.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
15.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
15.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
15.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
15.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
15.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
15.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
14.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
14.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
14.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
14.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
14.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
14.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
14.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
14.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
14.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
14.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
14.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
14.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
14.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
14.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
14.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
14.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
14.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
14.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
14.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
14.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
14.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
14.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
14.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
14.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
14.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
14.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
14.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
14.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
13.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
13.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
13.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
13.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
13.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
13.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
13.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
13.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
13.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
13.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
13.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
13.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
13.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
13.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
13.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
13.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
13.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
13.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
13.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
13.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
13.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
13.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
13.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
13.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
13.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
13.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
13.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
13.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
13.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
13.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
13.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
12.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
12.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
12.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
12.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
12.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
12.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
12.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
12.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
12.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
12.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
12.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
12.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
12.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
12.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
12.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
12.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
12.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
12.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
12.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
12.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
12.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
12.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
12.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
12.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
12.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
12.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
12.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
12.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
12.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
12.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
12.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
12.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
12.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
12.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
11.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
11.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
11.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
11.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
11.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
11.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
11.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
11.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
11.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
11.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
11.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
11.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
11.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
11.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
11.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
11.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
11.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
11.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
10.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
10.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
10.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
10.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
10.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
10.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
10.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
10.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
10.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
10.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
10.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
10.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
10.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
10.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
10.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
10.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
10.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
10.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
10.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
10.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
10.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
10.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
10.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
10.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
10.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
10.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
10.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
9.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
9.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
9.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
9.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
9.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
9.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
9.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
9.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
9.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
9.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
9.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
9.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
9.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
9.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
9.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
8.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
8.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
8.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
8.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
8.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
8.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
8.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
8.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
7.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
7.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
7.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
7.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
7.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
7.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
7.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
7.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
6.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
5.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
5.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NBAS is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4.9
Number of samples
231
Samples
Sample
Description
TPM
DO23513
0 years, male, NA, stage:3, alive, 1200 days
36.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
13.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
11.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
10.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
10.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
9.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
9.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
8.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
8.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
8.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
8.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
8.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
8.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
8.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
8.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
7.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
7.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
7.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
7.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
7.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
7.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
7.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
7.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
6.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
6.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
6.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
6.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
6.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
6.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
6.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
6.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
6.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
6.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
6.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
6.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
6.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
6.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
6.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
6.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
6.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
6.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
6.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
6.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
6.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
5.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
5.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
5.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
5.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
5.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
5.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
5.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
5.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
5.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
5.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
5.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
5.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
5.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
5.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
5.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
5.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
5.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
5.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
5.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
5.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
5.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
5.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
5.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
5.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
5.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
5.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
5.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
5.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
5.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
5.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
5.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
5.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
5.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
5.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
5.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
5.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
5.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
5.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
5.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
5.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
5.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
5.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
5.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
5.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
5.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
5.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
5.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
5.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
4.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
4.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
4.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
4.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
4.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
4.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
4.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
4.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
4.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
4.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
4.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
4.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
4.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
4.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
4.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
4.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
4.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
4.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
4.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
4.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
4.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
4.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
4.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
4.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
4.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
4.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
4.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
4.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
4.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
4.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
4.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
4.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
4.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
4.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
4.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
4.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
4.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
4.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
4.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
4.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
4.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
4.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
4.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
4.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
4.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
4.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
4.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
4.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
4.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
4.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
4.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
4.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
4.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
4.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
4.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
4.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
4.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
4.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
4.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
4.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
4.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
4.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
3.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
3.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
3.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
3.9
DO48728
0 years, female, NA, stage:2, alive, 150 days
3.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
3.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
3.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
3.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
3.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
3.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
3.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
3.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
3.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
3.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
3.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
3.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
3.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
3.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
3.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
3.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
3.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
3.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
3.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
3.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
3.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
3.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
3.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
3.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
3.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
3.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
3.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
3.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
3.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
3.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
3.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
3.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
3.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
3.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
3.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
3.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
3.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
3.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
3.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
3.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
3.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
3.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
2.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
2.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
2.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
2.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
2.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
2.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
2.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
2.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
2.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
2.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
2.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
2.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
2.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
2.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
2.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
2.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
2.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
2.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
2.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
2.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
2.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
2.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
2.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
2.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
2.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
1.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
1.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
1.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
1.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
745
Tumor
0.7
445
Tumor
0.6
915
Tumor
0.6
911
Tumor
0.6
727
Tumor
0.5
1027
Tumor
0.5
1043
Tumor
0.5
863
Tumor
0.5
227
Tumor
0.4
741
Tumor
0.4
481
Tumor
0.4
857
Tumor
0.4
755
Tumor
0.4
171
Tumor
0.4
615
Tumor
0.4
635
Tumor
0.3
867
Tumor
0.3
257
Tumor
0.3
785
Tumor
0.3
261
Tumor
0.3
113
Tumor
0.3
665
Tumor
0.3
648
Normal
0.3
451
Tumor
0.3
527
Tumor
0.3
195
Tumor
0.3
636
Normal
0.3
955
Tumor
0.3
148
Normal
0.3
363
Tumor
0.3
314
Normal
0.3
744
Normal
0.3
332
Normal
0.3
426
Normal
0.3
697
Tumor
0.3
572
Normal
0.3
356
Normal
0.2
466
Normal
0.2
616
Normal
0.2
981
Tumor
0.2
567
Tumor
0.2
147
Tumor
0.2
922
Normal
0.2
513
Tumor
0.2
868
Normal
0.2
128
Normal
0.2
353
Tumor
0.2
414
Normal
0.2
1045
Tumor
0.2
271
Tumor
0.2
866
Normal
0.2
921
Tumor
0.2
435
Tumor
0.2
662
Normal
0.2
127
Tumor
0.2
351
Tumor
0.2
553
Tumor
0.2
187
Tumor
0.2
376
Normal
0.2
468
Normal
0.2
125
Tumor
0.2
568
Normal
0.2
393
Tumor
0.2
824
Normal
0.2
968
Normal
0.2
392
Normal
0.2
473
Tumor
0.2
786
Normal
0.2
564
Normal
0.2
488
Normal
0.2
267
Tumor
0.2
618
Normal
0.2
944
Normal
0.2
424
Normal
0.2
446
Normal
0.2
196
Normal
0.2
285
Tumor
0.2
728
Normal
0.2
312
Normal
0.2
617
Tumor
0.2
967
Tumor
0.2
278
Normal
0.2
172
Normal
0.2
864
Normal
0.2
191
Tumor
0.2
484
Normal
0.2
358
Normal
0.2
722
Normal
0.2
918
Normal
0.2
1046
Normal
0.2
412
Normal
0.2
878
Normal
0.2
724
Normal
0.2
313
Tumor
0.2
431
Tumor
0.2
352
Normal
0.2
1044
Normal
0.2
232
Normal
0.2
354
Normal
0.2
742
Normal
0.2
1015
Tumor
0.2
738
Normal
0.1
492
Normal
0.1
388
Normal
0.1
818
Normal
0.1
132
Normal
0.1
428
Normal
0.1
642
Normal
0.1
145
Tumor
0.1
913
Tumor
0.1
342
Normal
0.1
628
Normal
0.1
491
Tumor
0.1
482
Normal
0.1
464
Normal
0.1
136
Normal
0.1
664
Normal
0.1
284
Normal
0.1
1032
Normal
0.1
212
Normal
0.1
361
Tumor
0.1
723
Tumor
0.1
964
Normal
0.1
494
Normal
0.1
365
Tumor
0.1
286
Normal
0.1
462
Normal
0.1
298
Normal
0.1
362
Normal
0.1
914
Normal
0.1
916
Normal
0.1
221
Tumor
0.1
366
Normal
0.1
258
Normal
0.1
162
Normal
0.1
912
Normal
0.1
672
Normal
0.1
268
Normal
0.1
926
Normal
0.1
777
Tumor
0.1
422
Normal
0.1
862
Normal
0.1
641
Tumor
0.1
976
Normal
0.1
188
Normal
0.1
952
Normal
0.1
534
Normal
0.1
686
Normal
0.1
943
Tumor
0.1
186
Normal
0.1
423
Tumor
0.1
518
Normal
0.1
874
Normal
0.1
558
Normal
0.1
228
Normal
0.1
514
Normal
0.1
114
Normal
0.1
111
Normal
0.1
415
Tumor
0.1
328
Normal
0.1
721
Tumor
0.1
816
Normal
0.1
526
Normal
0.1
984
Normal
0.1
142
Normal
0.1
954
Normal
0.1
852
Normal
0.1
137
Tumor
0.1
966
Normal
0.1
272
Normal
0.1
938
Normal
0.1
882
Normal
0.1
746
Normal
0.1
1022
Normal
0.1
124
Normal
0.1
714
Normal
0.1
956
Normal
0.1
456
Normal
0.1
472
Normal
0.1
815
Tumor
0.1
357
Tumor
0.1
666
Normal
0.1
924
Normal
0.1
698
Normal
0.1
546
Normal
0.1
448
Normal
0.1
537
Tumor
0.1
126
Normal
0.1
696
Normal
0.1
463
Tumor
0.1
498
Normal
0.1
1041
Tumor
0.1
1016
Normal
0.1
884
Normal
0.1
384
Normal
0.1
516
Normal
0.1
444
Normal
0.1
1014
Normal
0.0
452
Normal
0.0
1028
Normal
0.0
478
Normal
0.0
517
Tumor
0.0
737
Tumor
0.0
977
Tumor
0.0
436
Normal
0.0
416
Normal
0.0
685
Tumor
0.0
958
Normal
0.0
394
Normal
0.0
331
Tumor
0.0
135
Tumor
0.0
574
Normal
0.0
528
Normal
0.0
224
Normal
0.0
434
Normal
0.0
571
Tumor
0.0
262
Normal
0.0
396
Normal
0.0
218
Normal
0.0
756
Normal
0.0
778
Normal
0.0
554
Normal
0.0
386
Normal
0.0
432
Normal
0.0
467
Tumor
0.0
538
Normal
0.0
978
Normal
0.0
427
Tumor
0.0
368
Normal
0.0
487
Tumor
0.0
344
Normal
0.0
341
Tumor
0.0
982
Normal
0.0
1042
Normal
0.0
523
Tumor
0.0
925
Tumor
0.0
533
Tumor
0.0
223
Tumor
0.0
214
Normal
0.0
823
Tumor
0.0
222
Normal
0.0
383
Tumor
0.0
881
Tumor
0.0
146
Normal
0.0
524
Normal
0.0
663
Tumor
0.0
873
Tumor
0.0
364
Normal
0.0
447
Tumor
0.0
474
Normal
0.0
917
Tumor
0.0
387
Tumor
0.0
1013
Tumor
0.0
858
Normal
0.0
713
Tumor
0.0
185
Tumor
0.0
923
Tumor
0.0
557
Tumor
0.0
297
Tumor
0.0
1021
Tumor
-0.1
716
Normal
-0.1
877
Tumor
-0.1
743
Tumor
-0.1
515
Tumor
-0.1
327
Tumor
-0.1
161
Tumor
-0.1
671
Tumor
-0.1
536
Normal
-0.1
192
Normal
-0.1
963
Tumor
-0.1
391
Tumor
-0.1
283
Tumor
-0.1
937
Tumor
-0.1
141
Tumor
-0.1
851
Tumor
-0.1
131
Tumor
-0.1
455
Tumor
-0.1
311
Tumor
-0.1
112
Tumor
-0.1
975
Tumor
-0.1
123
Tumor
-0.1
647
Tumor
-0.1
471
Tumor
-0.1
443
Tumor
-0.1
217
Tumor
-0.1
715
Tumor
-0.1
951
Tumor
-0.1
421
Tumor
-0.1
231
Tumor
-0.1
433
Tumor
-0.1
535
Tumor
-0.1
493
Tumor
-0.1
483
Tumor
-0.1
1026
Normal
-0.1
138
Normal
-0.1
395
Tumor
-0.1
277
Tumor
-0.1
661
Tumor
-0.1
814
Normal
-0.1
1031
Tumor
-0.2
861
Tumor
-0.2
385
Tumor
-0.2
413
Tumor
-0.2
343
Tumor
-0.2
525
Tumor
-0.2
465
Tumor
-0.2
477
Tumor
-0.2
563
Tumor
-0.2
461
Tumor
-0.2
983
Tumor
-0.2
883
Tumor
-0.2
573
Tumor
-0.2
953
Tumor
-0.2
695
Tumor
-0.2
213
Tumor
-0.2
545
Tumor
-0.2
497
Tumor
-0.2
865
Tumor
-0.3
813
Tumor
-0.3
211
Tumor
-0.3
965
Tumor
-0.3
355
Tumor
-0.3
1025
Tumor
-0.3
627
Tumor
-0.3
367
Tumor
-0.4
411
Tumor
-0.4
817
Tumor
-0.4
957
Tumor
-0.5
375
Tumor
-0.5
425
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
