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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
INPP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
42.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
29.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
27.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
24.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
22.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
21.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
21.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
21.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
19.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
19.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
18.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
18.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
17.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
16.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
16.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
15.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
15.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
15.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
15.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
14.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
14.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
13.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
13.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
13.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
13.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
13.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
13.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
13.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
12.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
12.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
12.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
11.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
10.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
10.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
10.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
10.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
10.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
10.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
9.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
9.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
9.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
9.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
8.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
8.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
8.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
8.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
8.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
5.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
INPP1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
44.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
40.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
40.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
36.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
36.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
36.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
32.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
31.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
31.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
30.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
30.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
30.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
30.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
29.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
29.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
29.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
29.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
29.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
28.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
28.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
28.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
28.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
28.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
28.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
28.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
28.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
27.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
27.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
27.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
27.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
27.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
26.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
26.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
26.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
26.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
26.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
25.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
25.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
25.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
25.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
25.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
25.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
25.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
25.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
25.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
24.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
24.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
24.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
24.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
24.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
24.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
24.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
24.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
24.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
24.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
24.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
24.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
24.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
23.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
23.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
23.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
23.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
23.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
23.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
23.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
23.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
23.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
23.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
22.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
22.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
22.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
22.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
22.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
22.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
22.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
22.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
22.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
22.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
22.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
22.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
22.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
22.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
22.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
22.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
22.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
22.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
22.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
22.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
22.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
21.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
21.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
21.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
21.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
21.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
21.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
21.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
21.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
21.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
21.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
21.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
21.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
21.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
21.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
21.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
21.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
21.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
21.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
21.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
21.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
21.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
20.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
20.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
20.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
20.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
20.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
20.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
20.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
20.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
20.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
20.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
20.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
20.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
20.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
20.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
20.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
19.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
19.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
19.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
19.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
19.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
19.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
19.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
19.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
19.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
19.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
19.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
19.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
19.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
19.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
19.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
19.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
19.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
19.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
19.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
19.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
19.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
19.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
19.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
19.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
18.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
18.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
18.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
18.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
18.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
18.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
18.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
18.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
18.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
18.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
18.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
18.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
18.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
18.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
18.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
18.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
18.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
18.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
18.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
18.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
18.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
18.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
18.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
18.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
18.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
18.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
18.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
18.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
18.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
18.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
17.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
17.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
17.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
17.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
17.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
17.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
17.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
17.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
17.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
17.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
17.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
17.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
17.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
17.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
17.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
17.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
17.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
17.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
17.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
17.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
17.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
17.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
17.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
17.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
17.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
17.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
17.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
17.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
17.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
17.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
17.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
17.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
16.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
16.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
16.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
16.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
16.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
16.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
16.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
16.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
16.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
16.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
16.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
16.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
16.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
16.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
16.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
16.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
16.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
16.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
16.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
16.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
16.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
16.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
16.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
16.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
16.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
16.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
16.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
16.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
16.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
16.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
16.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
16.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
16.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
16.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
16.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
16.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
16.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
16.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
16.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
15.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
15.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
15.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
15.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
15.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
15.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
15.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
15.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
15.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
15.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
15.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
15.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
15.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
15.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
15.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
15.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
15.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
15.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
15.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
15.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
15.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
15.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
15.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
15.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
15.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
15.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
15.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
15.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
14.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
14.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
14.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
14.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
14.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
14.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
14.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
14.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
14.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
14.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
14.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
14.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
14.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
14.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
14.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
14.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
14.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
14.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
14.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
14.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
14.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
14.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
14.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
14.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
13.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
13.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
13.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
13.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
13.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
13.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
13.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
13.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
13.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
13.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
13.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
13.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
13.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
13.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
13.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
13.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
13.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
13.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
13.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
13.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
13.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
13.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
13.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
13.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
13.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
13.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
13.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
13.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
12.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
12.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
12.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
12.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
12.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
12.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
12.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
12.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
12.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
12.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
12.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
12.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
12.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
12.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
12.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
12.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
12.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
12.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
12.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
11.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
11.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
11.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
11.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
11.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
11.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
11.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
11.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
11.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
11.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
11.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
11.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
11.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
11.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
11.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
11.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
10.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
10.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
10.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
10.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
10.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
10.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
10.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
10.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
10.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
10.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
10.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
9.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
9.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
9.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
9.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
9.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
8.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
8.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
8.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
7.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
7.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
7.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
6.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
5.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
5.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
4.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
4.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
4.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
3.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
3.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
INPP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
36.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
34.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
33.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
33.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
32.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
32.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
30.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
30.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
29.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
29.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
29.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
29.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
27.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
26.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
26.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
25.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
25.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
25.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
25.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
24.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
24.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
24.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
24.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
23.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
23.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
23.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
23.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
22.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
22.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
22.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
22.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
22.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
22.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
22.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
21.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
21.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
21.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
21.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
20.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
20.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
20.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
20.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
19.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
19.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
19.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
19.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
19.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
19.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
19.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
19.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
18.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
18.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
18.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
18.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
18.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
18.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
18.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
18.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
18.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
18.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
17.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
17.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
17.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
17.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
17.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
17.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
16.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
16.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
15.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
14.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
14.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
14.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
13.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
13.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
12.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
12.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
12.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
12.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
12.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
11.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
11.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
11.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
10.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
9.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
9.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
9.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
8.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
INPP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
67.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
63.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
51.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
45.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
45.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
42.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
32.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
32.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
32.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
31.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
31.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
29.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
29.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
29.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
28.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
26.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
26.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
25.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
25.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
25.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
25.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
24.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
24.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
24.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
24.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
23.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
23.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
22.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
22.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
22.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
22.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
21.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
21.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
21.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
21.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
21.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
21.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
21.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
20.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
20.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
20.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
20.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
20.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
20.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
20.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
20.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
20.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
20.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
20.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
20.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
20.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
20.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
19.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
19.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
19.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
19.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
19.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
19.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
19.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
19.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
19.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
19.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
19.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
19.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
19.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
18.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
18.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
18.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
17.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
17.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
17.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
17.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
17.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
17.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
17.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
17.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
17.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
17.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
17.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
17.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
16.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
16.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
16.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
16.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
16.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
16.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
16.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
16.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
15.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
15.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
15.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
15.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
15.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
15.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
15.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
15.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
15.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
15.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
15.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
15.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
15.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
15.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
15.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
15.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
15.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
14.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
14.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
14.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
14.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
14.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
14.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
14.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
14.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
14.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
14.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
14.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
14.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
14.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
14.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
14.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
14.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
14.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
14.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
13.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
13.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
13.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
13.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
13.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
13.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
13.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
13.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
13.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
13.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
13.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
12.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
12.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
12.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
12.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
12.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
12.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
12.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
12.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
12.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
12.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
12.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
12.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
12.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
12.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
12.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
11.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
11.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
11.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
11.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
11.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
11.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
11.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
11.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
11.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
11.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
11.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
11.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
11.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
11.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
11.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
11.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
11.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
11.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
11.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
10.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
10.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
10.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
10.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
10.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
10.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
10.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
10.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
10.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
10.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
10.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
9.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
9.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
9.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
9.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
9.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
9.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
8.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
8.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
8.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
8.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
8.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
8.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
8.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
8.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
8.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
7.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
7.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
7.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
7.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
7.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
7.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
7.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
6.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
6.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
6.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
6.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
6.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
6.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
5.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
5.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
5.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
4.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
4.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
3.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
3.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
3.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
3.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
3.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
2.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
2.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
2.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088690003
Tumor
1.3
CPT0012670003
Tumor
0.9
CPT0012280003
Tumor
0.8
CPT0069000003
Tumor
0.8
CPT0015810003
Tumor
0.7
CPT0078990003
Tumor
0.7
CPT0078660003
Tumor
0.7
CPT0012550003
Tumor
0.7
CPT0007320003
Tumor
0.6
CPT0002270011
Tumor
0.6
CPT0075130003
Tumor
0.6
CPT0000640003
Tumor
0.6
CPT0024670003
Tumor
0.6
CPT0001500009
Tumor
0.6
CPT0017410003
Tumor
0.5
CPT0009060003
Tumor
0.5
CPT0079180003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0021240003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0002350011
Tumor
0.4
CPT0065810003
Tumor
0.4
CPT0019990003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0077110003
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0092160003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0086870003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0012290003
Normal
0.1
CPT0092190003
Normal
0.1
CPT0088630003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0024680001
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0015910003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0017850003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0078940001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0092310003
Normal
0.0
CPT0066520001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0001230001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0079270003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0088550004
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0009080003
Normal
-0.1
CPT0088970003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0085670003
Tumor
-0.1
CPT0025920001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0025580004
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0014450004
Tumor
-0.2
CPT0078840001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0025170003
Tumor
-0.2
CPT0063630003
Tumor
-0.3
CPT0084560003
Tumor
-0.3
CPT0014130001
Normal
-0.3
CPT0006950001
Normal
-0.3
CPT0065820001
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0012900004
Tumor
-0.3
CPT0066430001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0086820003
Tumor
-0.3
CPT0089460004
Tumor
-0.3
CPT0063640001
Normal
-0.3
CPT0092740003
Normal
-0.3
CPT0023710001
Normal
-0.4
CPT0012770003
Normal
-0.4
CPT0078530001
Normal
-0.4
CPT0001340003
Tumor
-0.4
CPT0026420001
Normal
-0.4
CPT0025610001
Normal
-0.4
CPT0020020001
Normal
-0.4
CPT0088780001
Normal
-0.5
CPT0081880003
Tumor
-0.5
CPT0081620001
Normal
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
