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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NDUFC2 is potential prognostic, high expression is favorable in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
617.3
Number of samples
349
Samples
Sample
Description
TPM
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
12118.8
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
11245.4
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
2204.3
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
2173.7
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
2090.8
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
1921.0
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
1877.9
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
1852.7
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1802.9
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
1645.1
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
1586.9
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
1575.3
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
1541.5
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
1332.0
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
1325.5
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
1292.6
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
1248.8
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1227.8
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
1193.9
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
1188.1
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1181.9
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
1160.6
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
1139.1
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
1121.5
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
1076.0
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
1074.8
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
1072.2
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
1067.4
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
1012.1
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
1011.5
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
1009.0
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
939.8
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
937.4
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
937.1
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
933.4
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
928.8
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
927.9
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
925.6
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
920.2
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
917.0
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
906.9
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
901.9
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
898.9
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
895.8
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
885.8
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
884.8
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
881.5
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
874.1
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
868.7
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
866.1
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
864.2
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
858.7
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
853.8
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
846.3
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
844.1
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
842.2
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
827.1
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
826.4
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
818.1
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
817.9
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
801.4
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
800.8
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
792.7
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
787.4
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
786.4
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
779.4
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
759.5
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
756.8
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
745.6
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
744.7
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
737.4
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
737.1
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
736.6
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
731.1
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
727.5
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
719.9
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
713.4
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
707.3
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
706.4
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
700.3
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
696.6
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
695.6
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
683.1
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
680.3
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
678.7
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
671.6
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
666.0
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
662.3
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
662.2
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
652.2
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
639.3
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
638.6
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
636.8
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
635.0
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
630.4
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
624.7
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
623.3
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
621.3
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
620.4
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
619.8
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
619.2
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
616.8
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
614.0
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
612.0
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
610.3
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
609.3
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
607.1
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
605.5
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
604.5
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
603.8
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
599.2
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
598.0
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
597.0
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
592.1
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
591.5
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
587.1
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
585.1
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
584.4
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
583.4
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
582.2
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
578.8
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
578.5
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
577.8
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
576.1
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
575.0
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
558.5
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
548.9
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
547.3
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
544.7
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
541.1
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
540.9
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
540.7
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
537.8
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
537.2
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
536.5
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
535.7
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
532.0
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
531.7
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
528.6
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
527.7
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
525.1
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
521.8
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
521.4
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
513.5
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
511.4
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
511.1
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
504.2
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
503.4
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
499.1
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
498.8
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
496.6
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
495.3
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
494.7
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
494.3
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
492.9
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
489.4
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
487.4
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
486.8
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
486.5
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
485.7
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
485.6
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
484.2
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
483.8
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
483.5
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
482.8
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
482.5
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
480.7
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
472.3
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
469.4
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
468.9
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
468.6
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
468.4
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
467.7
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
467.4
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
467.1
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
461.8
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
457.6
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
455.7
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
451.0
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
449.9
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
449.8
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
447.7
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
446.3
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
439.4
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
439.2
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
438.4
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
437.0
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
436.3
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
434.4
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
433.6
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
430.8
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
429.3
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
429.3
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
427.6
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
424.2
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
423.0
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
422.6
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
421.8
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
420.9
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
418.7
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
418.0
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
413.3
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
412.3
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
411.4
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
409.2
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
408.3
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
407.5
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
406.8
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
406.1
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
405.2
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
404.8
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
403.4
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
402.5
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
402.2
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
399.4
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
399.3
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
398.6
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
398.0
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
397.9
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
395.7
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
394.9
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
392.9
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
391.5
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
391.3
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
387.1
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
384.0
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
379.9
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
378.2
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
375.4
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
375.2
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
374.8
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
371.5
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
371.2
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
366.0
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
366.0
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
365.5
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
363.1
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
362.6
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
360.5
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
359.1
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
356.6
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
356.0
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
354.3
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
353.9
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
353.0
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
352.5
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
351.3
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
351.2
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
351.0
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
350.6
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
349.8
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
348.2
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
347.1
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
343.8
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
340.2
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
339.0
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
339.0
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
337.2
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
336.5
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
333.6
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
331.8
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
330.9
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
330.4
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
328.5
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
328.2
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
325.2
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
324.5
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
322.6
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
322.0
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
321.8
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
321.8
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
321.2
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
320.2
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
320.1
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
319.6
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
316.9
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
315.8
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
313.9
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
312.4
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
312.4
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
310.6
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
306.9
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
306.8
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
304.8
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
304.1
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
300.3
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
299.2
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
296.8
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
296.0
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
295.5
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
295.2
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
294.7
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
294.4
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
289.6
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
289.4
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
289.3
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
288.8
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
287.4
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
285.5
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
284.2
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
283.1
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
282.5
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
279.6
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
279.6
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
277.0
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
276.6
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
271.9
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
269.0
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
268.8
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
267.5
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
266.8
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
266.5
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
259.5
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
258.5
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
255.8
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
254.5
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
253.6
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
253.3
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
251.3
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
250.1
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
247.0
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
246.2
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
244.1
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
242.3
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
241.6
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
240.6
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
238.5
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
237.3
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
235.7
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
231.5
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
229.7
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
229.3
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
227.4
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
226.3
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
226.0
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
222.7
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
217.1
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
211.9
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
208.7
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
195.7
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
193.5
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
193.3
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
191.4
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
186.9
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
179.8
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
164.7
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
157.0
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
148.0
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NDUFC2 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
275.3
Number of samples
81
Samples
Sample
Description
TPM
DO46568
0 years, female, NA, stage:III, dead, 320 days
1072.4
DO46328
0 years, female, NA, stage:III, dead, 972 days
907.1
DO46329
0 years, female, NA, stage:III, dead, 1699 days
661.4
DO46576
0 years, female, NA, stage:III, alive, 133 days
570.0
DO46380
0 years, female, NA, stage:III, dead, 1423 days
531.8
DO46566
0 years, female, NA, stage:III, dead, 673 days
467.6
DO46366
0 years, female, NA, stage:III, dead, 2054 days
466.0
DO46453
0 years, female, NA, stage:III, dead, 3294 days
465.7
DO46342
0 years, female, NA, stage:III, dead, 1398 days
430.0
DO46390
0 years, female, NA, stage:III, dead, 374 days
405.1
DO46376
0 years, female, NA, stage:III, dead, 1430 days
369.7
DO46611
0 years, female, NA, stage:III, dead, 734 days
364.1
DO46336
0 years, female, NA, stage:IV, dead, 664 days
361.0
DO46448
0 years, female, NA, stage:III, dead, 654 days
357.6
DO46606
0 years, female, NA, stage:III, alive, 804 days
354.7
DO46356
0 years, female, NA, stage:III, dead, 911 days
353.3
DO46493
0 years, female, NA, stage:IV, alive, 839 days
352.3
DO46581
0 years, female, NA, stage:III, dead, 408 days
345.7
DO46327
0 years, female, NA, stage:III, dead, 184 days
334.6
DO46368
0 years, female, NA, stage:III, dead, 2879 days
316.3
DO46463
0 years, female, NA, stage:III, dead, 2451 days
313.7
DO46350
0 years, female, NA, stage:III, dead, 886 days
305.9
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
305.7
DO46370
0 years, female, NA, stage:III, dead, 1727 days
291.5
DO46551
0 years, female, NA, stage:III, dead, 1055 days
287.0
DO46538
0 years, female, NA, stage:III, dead, 1527 days
283.4
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
280.7
DO46533
0 years, female, NA, stage:III, alive, 3667 days
278.6
DO46388
0 years, female, NA, stage:III, dead, 413 days
278.4
DO46372
0 years, female, NA, stage:III, dead, 1326 days
276.0
DO46374
0 years, female, NA, stage:III, dead, 1409 days
275.0
DO46382
0 years, female, NA, stage:IV, dead, 311 days
271.6
DO46352
0 years, female, NA, stage:III, dead, 677 days
263.3
DO46528
0 years, female, NA, stage:III, alive, 6139 days
262.2
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
260.4
DO46432
0 years, female, NA, stage:III, alive, 2218 days
253.0
DO46591
0 years, female, NA, stage:III, dead, 195 days
252.4
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
251.5
DO46400
0 years, female, NA, stage:III, dead, 719 days
249.1
DO46560
0 years, female, NA, stage:IV, dead, 286 days
244.6
DO46340
0 years, female, NA, stage:III, dead, 616 days
243.2
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
240.0
DO46334
0 years, female, NA, stage:III, dead, 496 days
237.8
DO46378
0 years, female, NA, stage:III, alive, 843 days
235.2
DO46325
0 years, female, NA, stage:III, dead, 477 days
230.1
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
229.8
DO46333
0 years, female, NA, stage:III, dead, 359 days
226.2
DO46392
0 years, female, NA, stage:III, dead, 628 days
221.6
DO46386
0 years, female, NA, stage:III, dead, 1162 days
220.7
DO46443
0 years, female, NA, stage:III, dead, 2464 days
220.6
DO46346
0 years, female, NA, stage:III, dead, 1187 days
216.2
DO46354
0 years, female, NA, stage:III, dead, 843 days
212.6
DO46508
0 years, female, NA, stage:III, dead, 2101 days
207.6
DO46364
0 years, female, NA, stage:III, dead, 806 days
207.1
DO46344
0 years, female, NA, stage:III, dead, 642 days
207.0
DO46602
0 years, female, NA, stage:III, dead, 205 days
205.2
DO46331
0 years, female, NA, stage:III, dead, 612 days
205.0
DO46332
0 years, female, NA, stage:III, dead, 689 days
196.7
DO46586
0 years, female, NA, stage:III, dead, 1019 days
193.8
DO46348
0 years, female, NA, stage:IV, dead, 287 days
191.1
DO46404
0 years, female, NA, stage:III, dead, 690 days
182.6
DO46561
0 years, female, NA, stage:III, dead, 195 days
177.6
DO46518
0 years, female, NA, stage:III, alive, 2960 days
172.9
DO46358
0 years, female, NA, stage:III, dead, 423 days
169.2
DO46412
0 years, female, NA, stage:III, dead, 597 days
165.5
DO46546
0 years, female, NA, stage:III, dead, 1889 days
159.7
DO46362
0 years, female, NA, stage:III, dead, 1639 days
159.3
DO46396
0 years, female, NA, stage:III, dead, 583 days
156.6
DO46384
0 years, female, NA, stage:III, dead, 614 days
149.6
DO46398
0 years, female, NA, stage:III, alive, 437 days
146.6
DO46571
0 years, female, NA, stage:III, dead, 243 days
144.5
DO46330
0 years, female, NA, stage:III, dead, 684 days
142.3
DO46338
0 years, female, NA, stage:III, dead, 596 days
138.3
DO46588
0 years, female, NA, stage:III, dead, 438 days
136.9
DO46468
0 years, female, NA, stage:III, alive, 2776 days
135.8
DO46597
0 years, female, NA, stage:III, dead, 393 days
133.9
DO46402
0 years, female, NA, stage:III, dead, 511 days
129.6
DO46326
0 years, female, NA, stage:III, dead, 701 days
121.8
DO46436
0 years, female, NA, stage:III, alive, 3193 days
104.9
DO46408
0 years, female, NA, stage:III, dead, 489 days
92.6
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
69.2
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.9
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.7
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
0.6
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
0.5
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.4
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
0.4
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
0.4
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
0.4
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.3
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.3
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
0.3
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
0.2
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.1
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
0.0
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
0.0
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.1
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
-0.1
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-0.1
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-0.2
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-0.2
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-0.2
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-0.2
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.2
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-0.2
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-0.2
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.3
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
-0.3
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
-0.3
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.3
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-0.3
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-0.3
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-0.3
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-0.4
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
-0.4
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-0.4
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-0.5
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-0.5
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.5
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
-0.5
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
-0.6
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
-0.6
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
-0.6
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-0.6
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.6
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
-0.6
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-0.6
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
-0.6
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.7
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
-0.7
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-0.7
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-0.7
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.7
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-0.7
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
-0.7
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-0.7
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-0.7
e9d416e7-f661-400a-896e-388545_D2
Tumor
-0.7
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.7
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-0.7
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
-0.8
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.8
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-0.8
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
-0.8
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
-0.8
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.8
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.8
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-0.9
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
-1.0
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-1.0
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-1.0
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-1.0
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-1.0
15524912-685a-47ce-a824-567848_D2
Tumor
-1.1
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-1.1
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
-1.1
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-1.1
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
-1.1
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
-1.2
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-1.2
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-1.2
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-1.2
285fed94-1495-448e-879b-b55de9_D2
Tumor
-1.2
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-1.2
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-1.3
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-1.3
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-1.3
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-1.3
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
-1.3
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-1.4
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-1.4
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-1.4
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
-1.5
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
-1.5
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
-1.5
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-1.6
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-1.6
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-1.6
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
-1.6
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-1.7
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-1.7
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-1.9
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-1.9
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-2.0
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-2.1
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-2.1
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-2.2
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
-2.4
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-2.5
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OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.