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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MIA2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
88.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
81.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
78.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
75.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
74.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
74.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
72.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
70.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
68.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
66.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
66.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
64.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
63.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
62.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
62.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
61.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
60.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
60.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
59.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
59.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
59.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
58.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
58.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
57.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
57.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
56.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
56.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
56.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
55.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
55.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
54.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
54.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
54.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
53.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
53.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
53.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
52.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
52.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
52.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
52.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
51.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
51.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
51.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
51.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
50.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
50.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
50.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
50.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
50.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
49.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
49.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
49.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
49.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
49.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
49.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
48.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
48.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
48.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
47.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
47.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
47.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
47.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
47.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
47.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
46.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
46.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
46.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
45.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
45.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
45.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
45.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
44.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
44.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
44.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
44.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
44.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
44.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
43.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
43.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
43.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
43.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
43.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
43.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
42.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
42.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
42.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
42.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
41.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
41.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
41.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
41.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
41.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
41.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
41.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
41.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
41.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
41.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
41.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
41.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
41.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
40.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
40.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
40.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
40.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
40.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
40.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
40.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
39.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
39.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
39.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
39.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
39.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
38.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
38.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
38.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
38.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
38.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
38.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
38.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
38.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
37.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
37.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
37.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
37.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
36.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
36.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
36.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
36.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
36.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
36.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
36.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
35.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
35.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
35.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
35.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
35.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
35.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
35.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
35.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
35.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
35.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
35.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
35.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
34.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
34.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
34.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
33.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
33.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
33.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
33.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
33.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
33.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
32.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
32.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
32.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
32.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
32.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
32.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
32.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
32.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
31.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
31.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
31.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
31.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
31.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
31.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
31.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
31.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
31.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
30.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
30.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
30.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
30.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
30.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
30.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
30.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
30.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
30.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
30.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
30.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
29.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
29.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
29.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
29.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
29.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
29.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
29.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
29.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
29.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
29.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
29.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
29.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
29.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
29.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
29.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
29.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
28.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
28.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
28.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
28.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
28.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
27.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
27.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
27.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
27.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
27.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
27.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
27.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
27.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
27.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
26.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
26.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
26.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
26.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
26.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
25.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
25.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
25.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
25.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
25.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
25.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
25.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
24.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
24.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
24.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
24.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
23.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
23.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
23.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
23.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
23.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
23.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
23.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
23.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
22.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
22.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
22.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
22.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
22.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
21.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
21.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
21.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
21.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
21.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
20.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
20.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
20.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
20.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
20.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
20.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
19.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
19.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
19.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
19.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
19.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
19.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
19.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
19.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
19.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
19.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
19.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
19.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
19.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
19.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
19.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
19.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
19.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
18.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
18.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
18.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
18.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
18.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
18.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
17.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
17.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
16.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
16.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
16.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
16.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
16.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
16.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
16.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
16.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
16.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
16.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
16.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
16.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
16.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
15.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
15.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
15.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
14.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
14.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
14.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
14.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
14.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
14.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
13.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
13.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
13.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
13.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
13.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
13.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
12.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
12.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
12.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
11.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
11.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
11.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
11.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
11.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
11.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
11.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
10.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
10.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
10.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
9.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
9.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
9.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
9.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
8.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
8.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
8.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
8.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
8.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
8.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
8.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
8.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
7.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
7.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
7.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
7.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
7.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
6.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
6.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
6.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
6.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
6.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
5.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
5.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
4.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MIA2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.0
Number of samples
231
Samples
Sample
Description
TPM
DO45237
0 years, male, NA, stage:2, alive, 900 days
28.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
23.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
23.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
22.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
21.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
21.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
20.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
19.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
19.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
18.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
18.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
17.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
16.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
16.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
16.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
15.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
14.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
14.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
14.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
14.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
14.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
13.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
13.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
13.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
12.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
12.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
12.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
12.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
11.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
11.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
11.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
11.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
11.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
11.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
11.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
11.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
10.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
10.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
10.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
10.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
10.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
10.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
10.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
10.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
9.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
9.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
9.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
9.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
9.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
9.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
9.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
9.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
9.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
9.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
9.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
9.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
9.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
8.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
8.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
8.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
8.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
8.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
8.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
8.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
7.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
7.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
7.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
7.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
7.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
7.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
7.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
7.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
6.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
6.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
6.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
6.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
6.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
6.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
6.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
6.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
6.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
6.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
6.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
6.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
6.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
6.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
6.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
6.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
6.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
5.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
5.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
5.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
5.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
5.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
5.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
5.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
5.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
5.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
5.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
5.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
5.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
5.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
5.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
5.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
4.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
4.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
4.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
4.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
4.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
4.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
4.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
4.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
4.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
4.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
4.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
4.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
4.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
4.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
4.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
4.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
4.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
4.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
4.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
4.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
4.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
4.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
4.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
4.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
3.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
3.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
3.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
3.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
3.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
3.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
3.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
3.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
3.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
3.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
3.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
3.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
3.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
3.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
3.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
3.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
3.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
3.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
3.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
3.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
3.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
2.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
2.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
2.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
2.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
2.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
2.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
2.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
2.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
2.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
2.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
2.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
2.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
2.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
2.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
2.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
2.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
2.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
2.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
2.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
2.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
2.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
2.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
2.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
2.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
2.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
1.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
1.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
1.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
1.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
1.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
1.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
1.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
1.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
1.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
1.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
1.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
1.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
1.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
1.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
1.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
1.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
1.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
1.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
1.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
1.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
1.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
1.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
1.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
1.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
1.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
1.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
1.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
1.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
0.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
0.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
0.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
0.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
0.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
0.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
0.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
0.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
0.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
0.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
0.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
0.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
0.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
0.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
0.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
0.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
0.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
0.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
0.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
0.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
0.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
0.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
0.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
0.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
863
Tumor
0.9
1025
Tumor
0.9
745
Tumor
0.8
1027
Tumor
0.7
922
Normal
0.7
481
Tumor
0.6
981
Tumor
0.6
526
Normal
0.6
514
Normal
0.5
484
Normal
0.5
534
Normal
0.5
615
Tumor
0.5
911
Tumor
0.5
518
Normal
0.5
868
Normal
0.5
937
Tumor
0.5
1013
Tumor
0.5
964
Normal
0.5
864
Normal
0.5
474
Normal
0.5
462
Normal
0.5
1022
Normal
0.5
728
Normal
0.5
648
Normal
0.5
866
Normal
0.5
918
Normal
0.5
554
Normal
0.5
944
Normal
0.5
955
Tumor
0.4
558
Normal
0.4
878
Normal
0.4
528
Normal
0.4
824
Normal
0.4
912
Normal
0.4
921
Tumor
0.4
1028
Normal
0.4
738
Normal
0.4
1014
Normal
0.4
494
Normal
0.4
636
Normal
0.4
546
Normal
0.4
714
Normal
0.4
938
Normal
0.4
976
Normal
0.4
742
Normal
0.4
777
Tumor
0.4
445
Tumor
0.4
858
Normal
0.4
482
Normal
0.4
472
Normal
0.4
958
Normal
0.4
1042
Normal
0.4
527
Tumor
0.4
412
Normal
0.4
723
Tumor
0.4
852
Normal
0.4
1046
Normal
0.4
746
Normal
0.4
356
Normal
0.4
327
Tumor
0.4
755
Tumor
0.4
916
Normal
0.4
286
Normal
0.4
874
Normal
0.4
473
Tumor
0.4
882
Normal
0.4
686
Normal
0.4
132
Normal
0.4
696
Normal
0.4
924
Normal
0.4
915
Tumor
0.4
227
Tumor
0.4
568
Normal
0.4
698
Normal
0.4
228
Normal
0.4
857
Tumor
0.4
628
Normal
0.4
616
Normal
0.4
862
Normal
0.4
1032
Normal
0.4
984
Normal
0.4
1043
Tumor
0.4
722
Normal
0.4
135
Tumor
0.3
212
Normal
0.3
635
Tumor
0.3
952
Normal
0.3
968
Normal
0.3
756
Normal
0.3
1016
Normal
0.3
926
Normal
0.3
816
Normal
0.3
515
Tumor
0.3
564
Normal
0.3
1044
Normal
0.3
513
Tumor
0.3
914
Normal
0.3
572
Normal
0.3
1026
Normal
0.3
488
Normal
0.3
1015
Tumor
0.3
232
Normal
0.3
487
Tumor
0.3
786
Normal
0.3
328
Normal
0.3
884
Normal
0.3
416
Normal
0.3
954
Normal
0.3
978
Normal
0.3
553
Tumor
0.3
448
Normal
0.3
468
Normal
0.3
685
Tumor
0.3
284
Normal
0.3
138
Normal
0.3
516
Normal
0.3
966
Normal
0.3
422
Normal
0.3
956
Normal
0.3
982
Normal
0.3
492
Normal
0.3
258
Normal
0.3
523
Tumor
0.3
136
Normal
0.3
785
Tumor
0.3
778
Normal
0.3
716
Normal
0.3
261
Tumor
0.3
466
Normal
0.3
642
Normal
0.2
426
Normal
0.2
627
Tumor
0.2
128
Normal
0.2
436
Normal
0.2
452
Normal
0.2
741
Tumor
0.2
114
Normal
0.2
278
Normal
0.2
172
Normal
0.2
524
Normal
0.2
737
Tumor
0.2
145
Tumor
0.2
818
Normal
0.2
148
Normal
0.2
142
Normal
0.2
618
Normal
0.2
376
Normal
0.2
1045
Tumor
0.2
662
Normal
0.2
214
Normal
0.2
666
Normal
0.2
424
Normal
0.2
477
Tumor
0.2
364
Normal
0.2
358
Normal
0.2
464
Normal
0.2
224
Normal
0.2
744
Normal
0.2
342
Normal
0.2
222
Normal
0.2
388
Normal
0.2
873
Tumor
0.2
923
Tumor
0.2
574
Normal
0.2
365
Tumor
0.2
137
Tumor
0.2
478
Normal
0.2
272
Normal
0.2
196
Normal
0.1
414
Normal
0.1
362
Normal
0.1
641
Tumor
0.1
865
Tumor
0.1
415
Tumor
0.1
123
Tumor
0.1
111
Normal
0.1
435
Tumor
0.1
312
Normal
0.1
357
Tumor
0.1
538
Normal
0.1
727
Tumor
0.1
218
Normal
0.1
396
Normal
0.1
363
Tumor
0.1
867
Tumor
0.1
664
Normal
0.1
162
Normal
0.1
354
Normal
0.1
471
Tumor
0.1
695
Tumor
0.1
366
Normal
0.1
431
Tumor
0.1
1031
Tumor
0.1
314
Normal
0.1
392
Normal
0.1
298
Normal
0.1
353
Tumor
0.1
428
Normal
0.1
257
Tumor
0.1
394
Normal
0.1
533
Tumor
0.1
262
Normal
0.1
186
Normal
0.1
368
Normal
0.1
332
Normal
0.1
127
Tumor
0.1
977
Tumor
0.1
432
Normal
0.1
112
Tumor
0.0
967
Tumor
0.0
498
Normal
0.0
913
Tumor
0.0
268
Normal
0.0
851
Tumor
0.0
456
Normal
0.0
126
Normal
0.0
446
Normal
0.0
195
Tumor
0.0
963
Tumor
0.0
423
Tumor
0.0
188
Normal
0.0
672
Normal
0.0
444
Normal
0.0
975
Tumor
0.0
461
Tumor
0.0
124
Normal
0.0
536
Normal
0.0
146
Normal
0.0
455
Tumor
0.0
384
Normal
0.0
386
Normal
0.0
285
Tumor
0.0
361
Tumor
0.0
497
Tumor
0.0
861
Tumor
0.0
1041
Tumor
-0.1
113
Tumor
-0.1
463
Tumor
-0.1
221
Tumor
-0.1
721
Tumor
-0.1
344
Normal
-0.1
953
Tumor
-0.1
352
Normal
-0.1
983
Tumor
-0.1
713
Tumor
-0.1
881
Tumor
-0.1
823
Tumor
-0.1
883
Tumor
-0.1
965
Tumor
-0.1
277
Tumor
-0.1
141
Tumor
-0.1
813
Tumor
-0.1
355
Tumor
-0.1
223
Tumor
-0.1
957
Tumor
-0.1
943
Tumor
-0.2
571
Tumor
-0.2
697
Tumor
-0.2
434
Normal
-0.2
411
Tumor
-0.2
814
Normal
-0.2
451
Tumor
-0.2
267
Tumor
-0.2
743
Tumor
-0.2
563
Tumor
-0.2
917
Tumor
-0.2
393
Tumor
-0.2
191
Tumor
-0.2
217
Tumor
-0.2
313
Tumor
-0.2
433
Tumor
-0.2
421
Tumor
-0.2
1021
Tumor
-0.2
271
Tumor
-0.2
383
Tumor
-0.3
387
Tumor
-0.3
715
Tumor
-0.3
817
Tumor
-0.3
395
Tumor
-0.3
131
Tumor
-0.3
663
Tumor
-0.3
537
Tumor
-0.3
557
Tumor
-0.3
467
Tumor
-0.3
465
Tumor
-0.3
447
Tumor
-0.3
617
Tumor
-0.3
231
Tumor
-0.3
443
Tumor
-0.3
925
Tumor
-0.3
161
Tumor
-0.3
375
Tumor
-0.3
192
Normal
-0.3
647
Tumor
-0.4
297
Tumor
-0.4
493
Tumor
-0.4
665
Tumor
-0.4
147
Tumor
-0.4
125
Tumor
-0.4
815
Tumor
-0.4
187
Tumor
-0.4
341
Tumor
-0.4
171
Tumor
-0.5
517
Tumor
-0.5
877
Tumor
-0.5
535
Tumor
-0.5
951
Tumor
-0.5
661
Tumor
-0.5
311
Tumor
-0.5
724
Normal
-0.5
185
Tumor
-0.5
491
Tumor
-0.5
213
Tumor
-0.5
483
Tumor
-0.6
211
Tumor
-0.6
425
Tumor
-0.6
331
Tumor
-0.6
391
Tumor
-0.6
671
Tumor
-0.6
567
Tumor
-0.6
545
Tumor
-0.6
525
Tumor
-0.7
413
Tumor
-0.7
367
Tumor
-0.7
385
Tumor
-0.8
351
Tumor
-0.8
427
Tumor
-0.9
573
Tumor
-0.9
343
Tumor
-1.0
283
Tumor
-1.1
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
