HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:14.0 nTPM
HPA Brain:38.1 nTPM
GTEx:14.0 nTPM
FANTOM5:27.3 Scaled Tags Per Million
Pig:10.0 nTPM
Mouse:14.0 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048182
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 38.1
Sample id Sample description nTPM
Hippocampus
nTPM: 27.6
1911 Female, age 85, right hemisphere 33.5
2529 Female, age 94, left hemisphere 30.7
2621 Female, age 67, right hemisphere 30.5
2148 Female, age 91, left hemisphere 24.6
1855 Male, age 76, left hemisphere 24.4
1898 Male, age 80, left hemisphere 21.7
Dentate gyrus
nTPM: 31.1
2530 Female, age 94, left hemisphere 48.5
2531 Female, age 67, both hemispheres 30.4
2010 Male, age 76, both hemispheres 30.2
2528 Male, age 74, both hemispheres 29.7
2246 Female, age 85, both hemispheres 28.2
1927 Female, age 91, both hemispheres 19.4
Entorhinal gyrus
nTPM: 31.1
2117 Female, age 91, right hemisphere 42.9
2764 Male, age 80, right hemisphere 40.9
1938 Female, age 85, left hemisphere 27.5
1787 Male, age 76, left hemisphere 25.8
2686 Male, age 75, right hemisphere 25.3
2613 Female, age 94, left hemisphere 24.1
Hippocampus, CA1
nTPM: 26.6
2082 Female, age 91, right hemisphere 31.1
2527 Male, age 74, both hemispheres 28.4
1873 Female, age 85, both hemispheres 26.2
2749 Male, age 80, left hemisphere 24.0
2045 Male, age 76, both hemispheres 23.2
Hippocampus, CA2
nTPM: 29.9
2249 Male, age 74, both hemispheres 36.6
1963 Male, age 80, left hemisphere 34.2
2437 Female, age 94, left hemisphere 32.1
2113 Female, age 91, right hemisphere 30.3
1940 Female, age 85, left hemisphere 27.8
1892 Male, age 76, both hemispheres 18.5
Hippocampus, CA3
nTPM: 26.0
1891 Female, age 85, both hemispheres 40.2
2620 Female, age 94, left hemisphere 28.1
2436 Male, age 74, both hemispheres 26.6
1867 Male, age 76, both hemispheres 22.6
2137 Male, age 80, left hemisphere 20.1
2861 Female, age 67, both hemispheres 18.7
Parahippocampal cortex
nTPM: 27.9
2532 Female, age 72, left hemisphere 39.8
2692 Male, age 74, both hemispheres 35.2
2245 Female, age 91, both hemispheres 31.7
1990 Female, age 91, right hemisphere 31.0
2693 Female, age 94, both hemispheres 27.3
1850 Male, age 80, both hemispheres 27.1
2018 Male, age 76, both hemispheres 26.5
1933 Female, age 85, both hemispheres 25.1
2622 Female, age 67, right hemisphere 17.7
2250 Female, age 67, right hemisphere 17.5
Perirhinal gyrus
nTPM: 22.4
2848 Male, age 76, right hemisphere 25.9
2521 Female, age 94, right hemisphere 25.2
1794 Male, age 80, right hemisphere 23.8
1841 Female, age 85, right hemisphere 19.4
1847 Female, age 91, left hemisphere 17.6
Subiculum
nTPM: 38.1
2042 Male, age 76, both hemispheres 50.5
1901 Male, age 80, both hemispheres 44.0
1977 Female, age 85, both hemispheres 39.3
2438 Female, age 94, left hemisphere 34.9
2619 Male, age 74, both hemispheres 31.3
2729 Female, age 91, right hemisphere 28.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.0
Samples: 197

Max nTPM: 56.7
Min nTPM: 3.3
Std nTPM: 8.2
Median nTPM: 11.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 56.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 43.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 38.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 37.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 35.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 34.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 32.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 31.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 30.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 29.6
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 29.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 27.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.3
FF:10153-102I9 76 years, female 32.9
FF:10169-103B7 60 years, female 21.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 10.0
Pig sample Sample description nTPM
Subiculum
nTPM: 10.0
Samples: 4

Max nTPM: 11.3
Min nTPM: 8.1
Sample A Female 11.3
Sample B Female 10.9
Sample C Male 9.6
Sample D Male 8.1
Dorsal hippocampus
nTPM: 7.5
Samples: 4

Max nTPM: 7.9
Min nTPM: 6.7
Sample A Female 6.7
Sample B Female 7.4
Sample C Male 7.8
Sample D Male 7.9
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 11.7
Min nTPM: 7.8
Sample A Female 11.2
Sample B Female 7.8
Sample C Male 11.7
Sample D Male 8.6
Ventral hippocampus
nTPM: 8.3
Samples: 4

Max nTPM: 11.0
Min nTPM: 6.2
Sample A Female 7.0
Sample B Female 9.0
Sample C Male 11.0
Sample D Male 6.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 14.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.0
Samples: 4

Max nTPM: 17.0
Min nTPM: 11.7
Sample A Male 12.6
Sample B Male 14.6
Sample C Female 11.7
Sample D Female 17.0
Hippocampal formation
nTPM: 7.4
Samples: 4

Max nTPM: 10.5
Min nTPM: 5.5
Sample A Male 10.5
Sample B Male 7.0
Sample C Female 5.5
Sample D Female 6.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
69671726 Antisense, RP_050428_02_B12, Mouse strain C57BL/6J (56 days, male) 1.6
72472790 Antisense, RP_051101_02_E08, Mouse strain C57BL/6J (56 days, male) 0.8

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