HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:2.9 nTPM
HPA Brain:10.0 nTPM
GTEx:2.9 nTPM
FANTOM5:24.4 Scaled Tags Per Million
Pig:9.9 nTPM
Mouse:26.4 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039191
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 10.0
Sample id Sample description nTPM
Hippocampus
nTPM: 10.0
2621 Female, age 67, right hemisphere 13.5
1898 Male, age 80, left hemisphere 11.3
1855 Male, age 76, left hemisphere 10.3
2148 Female, age 91, left hemisphere 10.0
2529 Female, age 94, left hemisphere 7.6
1911 Female, age 85, right hemisphere 7.5
Dentate gyrus
nTPM: 9.5
2010 Male, age 76, both hemispheres 13.7
2530 Female, age 94, left hemisphere 11.7
1927 Female, age 91, both hemispheres 9.9
2246 Female, age 85, both hemispheres 7.8
2528 Male, age 74, both hemispheres 7.4
2531 Female, age 67, both hemispheres 6.4
Entorhinal gyrus
nTPM: 4.3
2117 Female, age 91, right hemisphere 6.5
2686 Male, age 75, right hemisphere 4.8
1787 Male, age 76, left hemisphere 4.5
2764 Male, age 80, right hemisphere 3.7
1938 Female, age 85, left hemisphere 3.5
2613 Female, age 94, left hemisphere 3.0
Hippocampus, CA1
nTPM: 9.8
2749 Male, age 80, left hemisphere 17.0
1873 Female, age 85, both hemispheres 13.3
2527 Male, age 74, both hemispheres 7.9
2082 Female, age 91, right hemisphere 5.7
2045 Male, age 76, both hemispheres 5.4
Hippocampus, CA2
nTPM: 8.6
1963 Male, age 80, left hemisphere 18.0
1892 Male, age 76, both hemispheres 7.7
2249 Male, age 74, both hemispheres 7.3
2437 Female, age 94, left hemisphere 6.7
2113 Female, age 91, right hemisphere 6.1
1940 Female, age 85, left hemisphere 6.0
Hippocampus, CA3
nTPM: 8.0
2861 Female, age 67, both hemispheres 14.0
2436 Male, age 74, both hemispheres 9.5
2137 Male, age 80, left hemisphere 8.0
1891 Female, age 85, both hemispheres 6.3
1867 Male, age 76, both hemispheres 5.1
2620 Female, age 94, left hemisphere 4.9
Parahippocampal cortex
nTPM: 4.3
2018 Male, age 76, both hemispheres 6.2
2245 Female, age 91, both hemispheres 5.6
1990 Female, age 91, right hemisphere 4.6
2622 Female, age 67, right hemisphere 4.6
2532 Female, age 72, left hemisphere 4.5
2692 Male, age 74, both hemispheres 4.5
2250 Female, age 67, right hemisphere 3.7
1933 Female, age 85, both hemispheres 3.4
1850 Male, age 80, both hemispheres 3.1
2693 Female, age 94, both hemispheres 2.8
Perirhinal gyrus
nTPM: 3.1
1841 Female, age 85, right hemisphere 3.4
2521 Female, age 94, right hemisphere 3.3
1847 Female, age 91, left hemisphere 3.1
2848 Male, age 76, right hemisphere 2.9
1794 Male, age 80, right hemisphere 2.7
Subiculum
nTPM: 6.2
2042 Male, age 76, both hemispheres 9.9
2729 Female, age 91, right hemisphere 7.4
1901 Male, age 80, both hemispheres 5.8
2438 Female, age 94, left hemisphere 5.4
2619 Male, age 74, both hemispheres 4.5
1977 Female, age 85, both hemispheres 4.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 2.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.9
Samples: 197

Max nTPM: 11.1
Min nTPM: 0.6
Std nTPM: 1.5
Median nTPM: 2.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 11.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 7.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 6.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 6.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 6.5
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 6.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 6.2
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 6.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 6.1
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 5.9
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 5.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 24.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.4
FF:10169-103B7 60 years, female 30.1
FF:10153-102I9 76 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 9.9
Pig sample Sample description nTPM
Subiculum
nTPM: 4.1
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.3
Sample A Female 4.9
Sample B Female 3.3
Sample C Male 4.2
Sample D Male 4.0
Dorsal hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 14.4
Min nTPM: 7.4
Sample A Female 14.4
Sample B Female 9.8
Sample C Male 7.5
Sample D Male 7.4
Entorhinal cortex
nTPM: 4.0
Samples: 4

Max nTPM: 4.5
Min nTPM: 3.2
Sample A Female 4.3
Sample B Female 4.5
Sample C Male 4.1
Sample D Male 3.2
Ventral hippocampus
nTPM: 10.0
Samples: 4

Max nTPM: 12.6
Min nTPM: 4.9
Sample A Female 12.6
Sample B Female 4.9
Sample C Male 12.2
Sample D Male 10.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 26.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.9
Samples: 4

Max nTPM: 12.8
Min nTPM: 9.0
Sample A Male 11.5
Sample B Male 9.0
Sample C Female 12.8
Sample D Female 10.1
Hippocampal formation
nTPM: 26.4
Samples: 4

Max nTPM: 36.0
Min nTPM: 20.0
Sample A Male 20.0
Sample B Male 26.7
Sample C Female 36.0
Sample D Female 23.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
70546057 Antisense, RP_050623_03_E05, Mouse strain C57BL/6J (56 days, male) 4.5
70919818 Antisense, RP_050713_02_B03, Mouse strain C57BL/6J (56 days, male) 2.1
73931411 Antisense, RP_051214_04_E03, Mouse strain C57BL/6J (56 days, male) 2.0
73512206 Antisense, RP_050713_02_B03, Mouse strain C57BL/6J (56 days, male) 1.6

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