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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM219 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
124.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
413.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
388.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
323.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
317.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
312.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
305.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
268.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
262.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
257.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
253.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
247.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
246.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
245.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
244.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
243.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
242.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
241.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
241.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
234.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
233.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
225.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
224.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
220.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
218.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
215.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
213.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
212.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
212.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
212.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
207.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
207.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
206.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
205.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
203.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
203.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
199.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
198.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
198.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
197.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
197.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
196.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
195.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
193.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
192.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
190.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
189.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
188.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
186.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
186.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
183.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
182.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
179.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
179.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
179.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
178.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
177.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
174.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
173.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
172.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
171.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
171.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
170.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
169.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
169.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
168.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
166.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
166.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
166.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
165.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
165.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
165.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
164.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
162.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
159.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
158.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
157.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
157.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
157.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
155.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
155.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
155.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
154.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
154.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
153.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
153.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
152.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
150.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
150.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
149.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
149.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
148.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
147.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
147.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
146.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
146.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
146.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
146.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
146.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
144.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
143.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
143.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
143.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
142.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
141.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
140.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
140.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
140.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
139.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
139.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
138.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
137.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
137.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
136.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
136.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
135.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
134.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
134.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
134.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
133.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
133.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
133.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
132.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
132.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
132.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
131.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
131.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
131.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
130.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
129.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
129.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
129.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
129.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
128.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
128.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
128.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
128.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
128.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
128.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
128.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
128.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
128.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
128.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
127.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
127.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
127.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
127.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
126.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
126.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
126.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
125.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
125.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
125.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
124.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
124.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
124.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
124.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
123.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
123.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
123.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
123.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
122.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
122.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
122.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
121.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
121.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
121.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
120.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
120.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
120.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
120.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
117.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
117.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
117.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
117.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
116.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
116.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
116.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
116.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
116.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
116.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
116.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
116.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
114.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
113.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
112.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
111.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
111.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
111.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
111.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
111.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
111.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
111.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
110.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
110.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
110.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
110.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
109.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
108.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
107.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
107.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
107.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
107.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
106.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
106.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
105.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
105.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
104.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
104.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
104.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
103.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
102.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
102.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
102.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
102.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
101.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
101.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
100.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
100.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
100.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
100.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
100.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
99.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
99.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
99.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
98.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
98.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
98.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
98.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
98.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
97.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
97.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
97.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
97.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
96.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
96.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
96.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
96.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
96.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
95.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
95.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
94.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
94.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
94.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
94.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
94.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
94.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
94.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
93.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
93.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
93.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
92.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
92.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
91.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
91.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
90.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
90.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
90.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
90.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
90.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
89.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
89.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
89.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
89.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
88.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
87.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
87.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
86.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
86.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
86.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
86.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
85.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
85.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
85.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
84.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
84.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
84.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
83.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
83.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
82.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
82.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
82.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
81.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
81.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
80.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
80.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
79.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
79.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
79.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
78.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
78.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
78.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
78.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
78.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
77.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
77.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
77.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
76.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
76.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
75.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
75.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
74.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
74.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
73.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
73.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
73.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
73.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
72.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
72.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
72.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
72.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
72.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
72.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
72.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
71.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
71.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
71.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
70.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
70.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
70.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
68.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
68.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
68.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
67.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
67.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
66.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
66.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
66.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
65.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
65.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
65.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
65.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
63.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
63.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
63.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
63.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
62.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
62.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
61.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
61.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
61.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
60.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
60.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
60.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
60.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
60.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
58.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
58.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
58.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
58.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
57.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
55.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
53.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
52.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
50.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
50.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
48.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
48.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
47.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
47.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
43.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
40.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM219 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
88.6
Number of samples
231
Samples
Sample
Description
TPM
DO50839
0 years, female, NA, stage:3, alive, 330 days
424.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
302.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
277.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
234.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
217.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
198.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
193.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
191.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
186.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
185.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
180.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
180.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
180.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
179.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
161.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
157.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
153.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
153.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
152.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
152.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
152.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
148.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
148.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
146.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
144.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
144.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
143.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
140.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
138.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
136.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
135.3
DO45249
0 years, male, NA, stage:1, alive, 630 days
134.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
133.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
133.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
129.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
127.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
126.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
125.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
122.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
121.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
120.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
120.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
119.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
118.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
118.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
117.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
116.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
115.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
114.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
112.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
111.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
109.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
109.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
109.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
108.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
108.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
108.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
108.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
106.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
106.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
105.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
104.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
104.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
104.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
102.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
102.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
102.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
101.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
101.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
101.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
99.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
98.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
98.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
98.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
97.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
97.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
97.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
96.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
96.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
96.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
96.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
94.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
94.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
93.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
93.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
92.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
92.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
92.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
92.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
92.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
91.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
91.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
91.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
91.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
89.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
89.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
89.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
89.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
88.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
88.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
87.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
87.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
87.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
86.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
86.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
86.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
86.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
85.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
85.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
85.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
84.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
83.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
83.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
83.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
83.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
82.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
82.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
82.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
82.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
82.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
81.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
80.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
77.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
77.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
76.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
75.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
75.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
72.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
72.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
72.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
72.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
71.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
71.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
71.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
71.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
71.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
71.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
69.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
68.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
68.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
68.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
68.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
67.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
67.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
67.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
67.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
66.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
66.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
66.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
66.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
65.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
65.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
64.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
64.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
64.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
63.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
63.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
63.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
62.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
62.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
62.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
61.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
61.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
60.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
59.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
59.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
58.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
58.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
58.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
57.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
57.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
56.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
56.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
55.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
55.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
54.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
54.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
53.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
53.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
52.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
52.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
52.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
50.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
50.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
50.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
49.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
49.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
48.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
48.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
47.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
46.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
45.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
44.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
43.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
42.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
42.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
42.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
41.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
41.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
41.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
40.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
39.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
39.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
39.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
38.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
38.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
38.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
38.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
38.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
37.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
36.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
36.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
36.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
35.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
34.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
34.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
34.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
34.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
34.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
34.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
33.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
27.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
27.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
27.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
27.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
26.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
26.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
24.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
23.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
18.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
18.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
911
Tumor
1.5
913
Tumor
0.9
981
Tumor
0.9
435
Tumor
0.8
171
Tumor
0.8
527
Tumor
0.8
877
Tumor
0.7
554
Normal
0.7
432
Normal
0.7
446
Normal
0.7
1041
Tumor
0.7
444
Normal
0.7
741
Tumor
0.7
341
Tumor
0.7
414
Normal
0.7
695
Tumor
0.6
433
Tumor
0.6
915
Tumor
0.6
545
Tumor
0.6
861
Tumor
0.6
641
Tumor
0.6
112
Tumor
0.6
965
Tumor
0.6
426
Normal
0.6
714
Normal
0.6
428
Normal
0.5
944
Normal
0.5
636
Normal
0.5
884
Normal
0.5
424
Normal
0.5
813
Tumor
0.5
1015
Tumor
0.5
473
Tumor
0.5
912
Normal
0.5
744
Normal
0.5
722
Normal
0.5
1027
Tumor
0.5
434
Normal
0.5
938
Normal
0.5
926
Normal
0.5
696
Normal
0.5
393
Tumor
0.5
113
Tumor
0.4
867
Tumor
0.4
924
Normal
0.4
387
Tumor
0.4
468
Normal
0.4
1046
Normal
0.4
451
Tumor
0.4
716
Normal
0.4
352
Normal
0.4
685
Tumor
0.4
436
Normal
0.4
142
Normal
0.4
686
Normal
0.4
1045
Tumor
0.4
368
Normal
0.4
361
Tumor
0.4
952
Normal
0.4
878
Normal
0.4
395
Tumor
0.3
422
Normal
0.3
353
Tumor
0.3
358
Normal
0.3
431
Tumor
0.3
742
Normal
0.3
123
Tumor
0.3
723
Tumor
0.3
618
Normal
0.3
642
Normal
0.3
738
Normal
0.3
136
Normal
0.3
362
Normal
0.3
954
Normal
0.3
172
Normal
0.3
536
Normal
0.3
824
Normal
0.3
132
Normal
0.3
466
Normal
0.3
1044
Normal
0.3
916
Normal
0.3
553
Tumor
0.3
342
Normal
0.3
533
Tumor
0.3
858
Normal
0.3
448
Normal
0.3
384
Normal
0.3
114
Normal
0.3
423
Tumor
0.3
186
Normal
0.3
882
Normal
0.3
138
Normal
0.3
756
Normal
0.3
124
Normal
0.3
955
Tumor
0.2
126
Normal
0.2
881
Tumor
0.2
344
Normal
0.2
818
Normal
0.2
328
Normal
0.2
713
Tumor
0.2
778
Normal
0.2
286
Normal
0.2
728
Normal
0.2
1016
Normal
0.2
966
Normal
0.2
968
Normal
0.2
914
Normal
0.2
327
Tumor
0.2
354
Normal
0.2
721
Tumor
0.2
456
Normal
0.2
188
Normal
0.2
413
Tumor
0.2
615
Tumor
0.2
148
Normal
0.2
1021
Tumor
0.2
366
Normal
0.2
918
Normal
0.2
922
Normal
0.2
628
Normal
0.2
127
Tumor
0.2
698
Normal
0.2
465
Tumor
0.2
392
Normal
0.2
141
Tumor
0.1
137
Tumor
0.1
956
Normal
0.1
376
Normal
0.1
228
Normal
0.1
1014
Normal
0.1
538
Normal
0.1
111
Normal
0.1
715
Tumor
0.1
464
Normal
0.1
427
Tumor
0.1
925
Tumor
0.1
982
Normal
0.1
443
Tumor
0.1
383
Tumor
0.1
786
Normal
0.1
1042
Normal
0.1
868
Normal
0.1
1028
Normal
0.1
162
Normal
0.1
146
Normal
0.1
365
Tumor
0.1
616
Normal
0.1
635
Tumor
0.1
977
Tumor
0.1
746
Normal
0.1
984
Normal
0.1
852
Normal
0.1
452
Normal
0.1
135
Tumor
0.1
617
Tumor
0.1
161
Tumor
0.1
627
Tumor
0.1
1026
Normal
0.0
923
Tumor
0.0
224
Normal
0.0
421
Tumor
0.0
546
Normal
0.0
187
Tumor
0.0
128
Normal
0.0
357
Tumor
0.0
857
Tumor
0.0
1022
Normal
0.0
367
Tumor
0.0
212
Normal
0.0
474
Normal
0.0
394
Normal
0.0
356
Normal
0.0
391
Tumor
0.0
978
Normal
0.0
364
Normal
0.0
351
Tumor
0.0
412
Normal
0.0
396
Normal
0.0
534
Normal
-0.1
724
Normal
-0.1
816
Normal
-0.1
411
Tumor
-0.1
958
Normal
-0.1
284
Normal
-0.1
185
Tumor
-0.1
953
Tumor
-0.1
963
Tumor
-0.1
917
Tumor
-0.1
145
Tumor
-0.1
472
Normal
-0.1
416
Normal
-0.1
976
Normal
-0.1
937
Tumor
-0.1
445
Tumor
-0.1
862
Normal
-0.1
883
Tumor
-0.1
964
Normal
-0.1
967
Tumor
-0.1
388
Normal
-0.1
477
Tumor
-0.1
874
Normal
-0.1
375
Tumor
-0.1
461
Tumor
-0.1
147
Tumor
-0.2
467
Tumor
-0.2
1032
Normal
-0.2
425
Tumor
-0.2
727
Tumor
-0.2
785
Tumor
-0.2
363
Tumor
-0.2
415
Tumor
-0.2
386
Normal
-0.2
873
Tumor
-0.2
864
Normal
-0.2
535
Tumor
-0.2
125
Tumor
-0.2
447
Tumor
-0.3
814
Normal
-0.3
455
Tumor
-0.3
462
Normal
-0.3
227
Tumor
-0.3
755
Tumor
-0.3
537
Tumor
-0.3
697
Tumor
-0.3
943
Tumor
-0.3
866
Normal
-0.3
355
Tumor
-0.3
463
Tumor
-0.3
921
Tumor
-0.4
983
Tumor
-0.4
482
Normal
-0.4
957
Tumor
-0.4
851
Tumor
-0.4
131
Tumor
-0.4
223
Tumor
-0.4
745
Tumor
-0.4
1025
Tumor
-0.5
471
Tumor
-0.5
343
Tumor
-0.5
975
Tumor
-0.5
1043
Tumor
-0.5
478
Normal
-0.5
817
Tumor
-0.6
777
Tumor
-0.6
1013
Tumor
-0.6
1031
Tumor
-0.6
481
Tumor
-0.6
863
Tumor
-0.6
211
Tumor
-0.6
528
Normal
-0.6
385
Tumor
-0.7
285
Tumor
-0.7
743
Tumor
-0.7
283
Tumor
-0.8
815
Tumor
-0.8
737
Tumor
-0.8
865
Tumor
-0.9
951
Tumor
-0.9
823
Tumor
-1.0
231
Tumor
N/A
232
Normal
N/A
483
Tumor
N/A
484
Normal
N/A
487
Tumor
N/A
488
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
494
Normal
N/A
497
Tumor
N/A
498
Normal
N/A
257
Tumor
N/A
258
Normal
N/A
261
Tumor
N/A
262
Normal
N/A
267
Tumor
N/A
268
Normal
N/A
271
Tumor
N/A
272
Normal
N/A
277
Tumor
N/A
278
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
513
Tumor
N/A
514
Normal
N/A
515
Tumor
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
648
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
663
Tumor
N/A
664
Normal
N/A
665
Tumor
N/A
666
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
311
Tumor
N/A
312
Normal
N/A
313
Tumor
N/A
314
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
564
Normal
N/A
567
Tumor
N/A
568
Normal
N/A
571
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
573
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
213
Tumor
N/A
214
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
221
Tumor
N/A
222
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.