HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:29.2 nTPM
HPA Brain:64.9 nTPM
GTEx:29.2 nTPM
FANTOM5:69.3 Scaled Tags Per Million
Pig:32.2 nTPM
Mouse:31.8 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039650
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 64.9
Sample id Sample description nTPM
Hippocampus
nTPM: 59.2
2529 Female, age 94, left hemisphere 76.2
2148 Female, age 91, left hemisphere 58.6
2621 Female, age 67, right hemisphere 57.8
1911 Female, age 85, right hemisphere 56.4
1898 Male, age 80, left hemisphere 56.0
1855 Male, age 76, left hemisphere 50.3
Dentate gyrus
nTPM: 58.0
2531 Female, age 67, both hemispheres 68.1
2530 Female, age 94, left hemisphere 63.9
2246 Female, age 85, both hemispheres 57.2
2010 Male, age 76, both hemispheres 56.5
1927 Female, age 91, both hemispheres 52.3
2528 Male, age 74, both hemispheres 49.7
Entorhinal gyrus
nTPM: 60.4
1787 Male, age 76, left hemisphere 66.2
2613 Female, age 94, left hemisphere 64.0
2764 Male, age 80, right hemisphere 62.0
1938 Female, age 85, left hemisphere 56.8
2117 Female, age 91, right hemisphere 56.7
2686 Male, age 75, right hemisphere 56.4
Hippocampus, CA1
nTPM: 60.9
2749 Male, age 80, left hemisphere 79.1
2082 Female, age 91, right hemisphere 63.6
2527 Male, age 74, both hemispheres 61.0
1873 Female, age 85, both hemispheres 51.1
2045 Male, age 76, both hemispheres 49.6
Hippocampus, CA2
nTPM: 57.5
2113 Female, age 91, right hemisphere 66.0
2437 Female, age 94, left hemisphere 63.1
1963 Male, age 80, left hemisphere 59.9
1892 Male, age 76, both hemispheres 53.8
1940 Female, age 85, left hemisphere 53.5
2249 Male, age 74, both hemispheres 48.5
Hippocampus, CA3
nTPM: 64.9
2137 Male, age 80, left hemisphere 77.3
2861 Female, age 67, both hemispheres 71.4
2620 Female, age 94, left hemisphere 69.8
2436 Male, age 74, both hemispheres 66.5
1867 Male, age 76, both hemispheres 53.5
1891 Female, age 85, both hemispheres 51.1
Parahippocampal cortex
nTPM: 53.5
2245 Female, age 91, both hemispheres 67.0
1850 Male, age 80, both hemispheres 62.9
1990 Female, age 91, right hemisphere 58.4
2692 Male, age 74, both hemispheres 54.2
2532 Female, age 72, left hemisphere 51.4
1933 Female, age 85, both hemispheres 51.3
2250 Female, age 67, right hemisphere 47.8
2693 Female, age 94, both hemispheres 47.5
2018 Male, age 76, both hemispheres 47.4
2622 Female, age 67, right hemisphere 47.3
Perirhinal gyrus
nTPM: 59.4
1794 Male, age 80, right hemisphere 76.0
1847 Female, age 91, left hemisphere 66.2
2521 Female, age 94, right hemisphere 54.8
2848 Male, age 76, right hemisphere 51.1
1841 Female, age 85, right hemisphere 49.2
Subiculum
nTPM: 58.4
2438 Female, age 94, left hemisphere 66.2
1901 Male, age 80, both hemispheres 64.7
1977 Female, age 85, both hemispheres 58.6
2042 Male, age 76, both hemispheres 57.1
2619 Male, age 74, both hemispheres 53.6
2729 Female, age 91, right hemisphere 50.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 29.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.2
Samples: 197

Max nTPM: 62.4
Min nTPM: 12.1
Std nTPM: 9.8
Median nTPM: 27.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 62.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 56.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 55.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 55.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 54.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 54.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 52.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 52.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 50.9
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 48.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 48.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 69.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.3
FF:10169-103B7 60 years, female 75.8
FF:10153-102I9 76 years, female 62.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 32.2
Pig sample Sample description nTPM
Subiculum
nTPM: 26.7
Samples: 4

Max nTPM: 33.0
Min nTPM: 22.7
Sample A Female 33.0
Sample B Female 25.1
Sample C Male 25.8
Sample D Male 22.7
Dorsal hippocampus
nTPM: 32.2
Samples: 4

Max nTPM: 43.8
Min nTPM: 22.6
Sample A Female 43.8
Sample B Female 36.1
Sample C Male 26.2
Sample D Male 22.6
Entorhinal cortex
nTPM: 26.7
Samples: 4

Max nTPM: 30.5
Min nTPM: 21.3
Sample A Female 27.4
Sample B Female 27.5
Sample C Male 30.5
Sample D Male 21.3
Ventral hippocampus
nTPM: 31.8
Samples: 4

Max nTPM: 38.7
Min nTPM: 22.9
Sample A Female 29.4
Sample B Female 22.9
Sample C Male 38.7
Sample D Male 36.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 31.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.7
Samples: 4

Max nTPM: 30.6
Min nTPM: 26.5
Sample A Male 26.5
Sample B Male 29.1
Sample C Female 30.6
Sample D Female 28.5
Hippocampal formation
nTPM: 31.8
Samples: 4

Max nTPM: 33.5
Min nTPM: 29.0
Sample A Male 33.5
Sample B Male 31.6
Sample C Female 29.0
Sample D Female 33.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
72081738 Antisense, RP_051019_01_A04, Mouse strain C57BL/6J (56 days, male) 0.1
71147765 Antisense, RP_050719_02_C04, Mouse strain C57BL/6J (56 days, male) 0.0

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