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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TM7SF2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
103.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
824.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
263.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
249.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
207.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
206.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
196.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
181.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
173.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
146.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
146.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
143.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
137.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
129.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
126.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
125.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
125.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
124.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
124.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
122.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
122.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
122.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
111.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
110.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
105.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
103.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
103.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
96.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
96.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
88.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
87.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
86.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
85.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
81.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
75.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
75.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
73.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
72.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
71.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
68.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
68.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
68.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
67.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
65.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
65.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
64.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
63.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
63.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
53.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
49.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
47.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
45.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
44.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
42.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
39.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
37.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
34.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
26.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
19.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
18.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
11.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
3.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
3.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TM7SF2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
120.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
87.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
74.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
71.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
65.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
64.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
64.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
61.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
56.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
49.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
47.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
47.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
47.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
46.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
45.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
37.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
36.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
34.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
33.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
33.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
32.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
32.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
31.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
31.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
30.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
30.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
29.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
29.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
29.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
29.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
29.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
29.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
29.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
29.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
28.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
28.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
28.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
27.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
26.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
26.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
25.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
25.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
24.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
24.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
23.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
23.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
23.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
22.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
22.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
22.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
22.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
22.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
21.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
21.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
21.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
21.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
21.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
20.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
20.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
20.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
20.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
20.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
20.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
20.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
20.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
19.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
19.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
19.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
19.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
19.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
19.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
19.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
18.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
18.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
18.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
18.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
18.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
18.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
18.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
17.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
17.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
17.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
17.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
17.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
17.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
17.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
17.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
17.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
17.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
17.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
17.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
17.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
17.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
17.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
17.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
17.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
17.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
17.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
17.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
17.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
16.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
16.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
16.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
16.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
16.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
16.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
16.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
16.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
15.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
15.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
15.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
15.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
15.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
15.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
15.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
15.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
15.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
15.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
15.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
15.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
15.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
14.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
14.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
14.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
14.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
14.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
14.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
14.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
14.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
14.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
14.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
14.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
14.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
14.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
14.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
14.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
14.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
14.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
14.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
13.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
13.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
13.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
13.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
13.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
13.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
13.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
13.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
13.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
13.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
13.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
13.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
13.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
13.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
13.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
12.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
12.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
12.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
12.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
12.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
12.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
12.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
12.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
12.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
12.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
12.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
12.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
12.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
12.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
12.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
12.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
12.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
12.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
12.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
12.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
12.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
12.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
12.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
12.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
12.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
11.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
11.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
11.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
11.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
11.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
11.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
11.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
11.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
11.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
11.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
11.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
11.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
11.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
11.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
11.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
11.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
11.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
10.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
10.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
10.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
10.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
10.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
10.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
10.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
10.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
10.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
10.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
10.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
10.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
10.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
10.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
10.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
10.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
10.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
10.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
10.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
10.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
10.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
10.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
10.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
10.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
10.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
10.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
10.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
10.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
10.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
10.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
10.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
10.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
10.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
10.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
9.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
9.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
9.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
9.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
9.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
9.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
9.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
9.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
9.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
9.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
9.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
9.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
9.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
9.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
9.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
9.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
9.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
9.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
9.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
9.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
9.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
9.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
9.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
9.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
9.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
9.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
9.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
9.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
9.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
8.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
8.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
8.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
8.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
8.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
8.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
8.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
8.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
8.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
8.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
8.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
8.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
8.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
8.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
8.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
8.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
8.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
8.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
8.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
8.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
8.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
8.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
8.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
8.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
8.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
8.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
8.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
7.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
7.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
7.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
7.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
7.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
7.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
7.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
7.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
7.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
7.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
7.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
7.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
7.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
7.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
7.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
7.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
7.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
7.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
7.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
7.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
7.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
7.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
7.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
7.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
7.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
7.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
7.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
7.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
7.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
7.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
6.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
6.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
6.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
6.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
6.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
6.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
6.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
6.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
6.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
6.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
6.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
6.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
6.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
6.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
6.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
6.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
6.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
6.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
6.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
6.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
6.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
6.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
6.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
6.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
6.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
5.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
5.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
5.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
5.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
5.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
5.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
5.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
5.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
5.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
5.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
5.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
5.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
5.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
5.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
5.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
5.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
5.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
5.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
5.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
5.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
5.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
4.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
4.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
4.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
4.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
4.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
4.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
4.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
4.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
4.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
4.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
4.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
4.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
4.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
4.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
4.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
4.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
4.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
4.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
4.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
3.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
3.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
3.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
3.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
3.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
3.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
3.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
3.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
3.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
3.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
3.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
3.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
3.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
3.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
3.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
2.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
2.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
2.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
2.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
2.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
2.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
2.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
2.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
2.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
2.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
2.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
2.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
2.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
1.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
1.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
1.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
1.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
1.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
1.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
1.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
1.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
1.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
1.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
1.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
1.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
0.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
0.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TM7SF2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
27.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
25.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
25.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
25.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
24.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
21.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
21.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
21.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
21.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
20.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
20.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
20.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
19.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
19.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
18.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
18.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
17.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
16.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
16.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
16.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
16.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
16.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
15.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
14.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
14.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
14.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
14.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
13.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
13.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
12.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
12.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
11.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
11.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
11.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
11.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
11.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
11.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
10.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
10.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
10.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
9.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
9.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
9.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
9.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
9.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
9.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
9.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
9.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
9.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
8.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
8.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
8.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
8.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
8.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
8.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
8.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
7.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
7.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
7.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
7.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
7.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
7.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
7.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
7.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
6.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
6.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
5.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
5.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
5.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
5.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
5.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
5.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
5.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
5.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
4.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
4.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
4.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
4.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
4.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
4.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
4.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
4.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
3.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
3.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
3.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
2.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
2.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
2.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
2.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
2.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TM7SF2 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
132.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
115.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
93.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
89.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
86.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
85.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
84.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
83.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
82.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
80.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
76.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
73.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
72.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
72.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
71.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
71.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
71.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
69.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
69.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
69.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
68.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
67.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
66.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
65.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
63.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
63.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
63.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
62.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
62.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
62.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
62.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
61.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
61.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
60.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
59.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
59.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
59.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
58.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
58.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
57.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
57.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
57.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
56.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
56.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
56.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
55.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
55.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
54.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
54.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
54.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
54.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
54.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
54.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
54.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
54.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
53.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
53.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
53.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
53.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
52.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
52.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
52.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
51.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
51.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
50.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
50.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
50.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
49.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
49.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
49.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
49.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
48.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
48.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
48.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
47.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
47.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
47.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
46.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
46.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
46.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
46.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
46.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
46.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
46.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
45.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
45.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
45.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
45.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
45.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
45.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
44.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
44.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
44.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
44.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
43.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
43.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
43.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
43.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
42.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
42.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
42.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
42.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
42.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
42.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
41.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
41.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
40.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
40.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
40.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
39.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
39.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
39.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
38.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
38.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
38.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
37.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
37.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
36.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
36.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
36.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
36.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
36.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
36.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
36.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
36.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
36.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
36.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
35.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
35.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
35.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
35.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
35.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
34.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
34.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
34.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
34.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
34.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
33.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
33.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
33.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
32.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
32.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
32.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
32.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
31.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
31.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
31.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
31.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
30.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
30.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
30.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
30.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
29.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
29.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
29.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
29.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
29.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
29.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
28.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
28.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
28.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
28.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
27.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
27.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
27.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
27.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
27.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
26.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
26.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
26.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
26.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
26.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
26.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
26.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
26.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
26.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
25.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
25.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
25.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
25.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
25.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
25.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
25.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
25.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
25.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
25.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
25.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
25.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
25.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
25.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
24.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
24.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
24.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
24.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
24.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
23.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
23.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
23.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
23.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
23.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
23.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
23.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
23.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
23.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
22.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
22.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
22.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
22.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
21.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
21.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
21.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
20.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
20.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
20.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
20.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
19.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
19.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
19.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
19.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
18.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
18.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
18.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
18.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
18.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
18.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
18.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
18.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
17.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
17.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
17.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
17.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
17.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
16.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
16.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
16.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
15.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
15.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
15.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
15.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
14.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
14.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
13.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
13.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
12.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
11.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
11.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
11.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
11.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
10.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
10.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
10.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
9.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
9.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
8.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
8.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
8.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
7.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
6.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
4.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
3.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
3.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
1.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
1.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078660003
Tumor
2.4
CPT0011410003
Tumor
1.8
CPT0079180003
Tumor
1.0
CPT0026420001
Normal
1.0
CPT0002270011
Tumor
0.8
CPT0066520001
Normal
0.7
CPT0025110003
Tumor
0.7
CPT0088640003
Normal
0.7
CPT0066430001
Normal
0.7
CPT0092310003
Normal
0.6
CPT0000790001
Normal
0.6
CPT0086370003
Normal
0.6
CPT0065450001
Normal
0.6
CPT0092800003
Normal
0.6
CPT0002350011
Tumor
0.6
CPT0088500001
Normal
0.6
CPT0002370001
Normal
0.6
CPT0006530001
Normal
0.5
CPT0092290003
Tumor
0.5
CPT0019130003
Tumor
0.5
CPT0078930003
Tumor
0.5
CPT0086890003
Normal
0.5
CPT0012640003
Normal
0.5
CPT0001550001
Normal
0.5
CPT0025170003
Tumor
0.5
CPT0092190003
Normal
0.5
CPT0020020001
Normal
0.5
CPT0079430001
Normal
0.5
CPT0086830003
Normal
0.5
CPT0023690003
Tumor
0.5
CPT0001230001
Normal
0.5
CPT0019160001
Normal
0.5
CPT0079510001
Normal
0.4
CPT0066480003
Tumor
0.4
CPT0087050003
Normal
0.4
CPT0088920001
Normal
0.4
CPT0001350001
Normal
0.4
CPT0078800003
Tumor
0.4
CPT0089480003
Normal
0.4
CPT0064400001
Normal
0.4
CPT0001510001
Normal
0.4
CPT0088570001
Normal
0.4
CPT0079300001
Normal
0.4
CPT0086970003
Normal
0.4
CPT0075720003
Tumor
0.4
CPT0088970003
Tumor
0.4
CPT0088710001
Normal
0.4
CPT0023360001
Normal
0.3
CPT0001190001
Normal
0.3
CPT0081620001
Normal
0.3
CPT0010120001
Normal
0.3
CPT0077320001
Normal
0.3
CPT0092740003
Normal
0.3
CPT0007470001
Normal
0.3
CPT0078670001
Normal
0.3
CPT0010170001
Normal
0.3
CPT0065820001
Normal
0.3
CPT0088630003
Tumor
0.3
CPT0078840001
Normal
0.2
CPT0078940001
Normal
0.2
CPT0079000001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0025230003
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0025580004
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0064370003
Tumor
0.2
CPT0069010001
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0089040001
Normal
0.2
CPT0077140001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0006730001
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0025920001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0075560003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0025060001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0006900003
Tumor
-0.2
CPT0017450001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0087040003
Tumor
-0.2
CPT0012370003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0092160003
Tumor
-0.2
CPT0092730003
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0012080003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0012550003
Tumor
-0.3
CPT0079480003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0079230003
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0001220008
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0014470001
Normal
-0.3
CPT0009000003
Tumor
-0.3
CPT0069000003
Tumor
-0.3
CPT0018250001
Normal
-0.3
CPT0077110003
Tumor
-0.3
CPT0081990003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0006630003
Tumor
-0.4
CPT0065430003
Tumor
-0.4
CPT0077490003
Tumor
-0.4
CPT0088900003
Tumor
-0.4
CPT0012920003
Normal
-0.4
CPT0015730003
Tumor
-0.4
CPT0025290003
Tumor
-0.4
CPT0011240003
Tumor
-0.4
CPT0086870003
Tumor
-0.5
CPT0010110003
Tumor
-0.5
CPT0024670003
Tumor
-0.5
CPT0079380003
Tumor
-0.5
CPT0017850003
Tumor
-0.5
CPT0020120003
Tumor
-0.5
CPT0025350003
Tumor
-0.5
CPT0077310003
Tumor
-0.5
CPT0075130003
Tumor
-0.5
CPT0000870016
Tumor
-0.5
CPT0065690003
Tumor
-0.6
CPT0025050003
Tumor
-0.6
CPT0078990003
Tumor
-0.6
CPT0014450004
Tumor
-0.6
CPT0026410003
Tumor
-0.6
CPT0007320003
Tumor
-0.6
CPT0086360003
Tumor
-0.6
CPT0021240003
Tumor
-0.6
CPT0020130001
Normal
-0.6
CPT0009080003
Normal
-0.6
CPT0084560003
Tumor
-0.6
CPT0066470004
Tumor
-0.7
CPT0088760003
Tumor
-0.7
CPT0063320003
Tumor
-0.7
CPT0014370004
Tumor
-0.7
CPT0000780007
Tumor
-0.8
CPT0069160003
Tumor
-0.8
CPT0012670003
Tumor
-0.8
CPT0012280003
Tumor
-0.8
CPT0092790003
Tumor
-0.8
CPT0085670003
Tumor
-0.9
CPT0071150004
Tumor
-0.9
CPT0001540009
Tumor
-0.9
CPT0086820003
Tumor
-0.9
CPT0019990003
Tumor
-0.9
CPT0009060003
Tumor
-0.9
CPT0001500009
Tumor
-0.9
CPT0088550004
Tumor
-1.0
CPT0001180009
Tumor
-1.0
CPT0078510003
Tumor
-1.0
CPT0012900004
Tumor
-1.0
CPT0001260009
Tumor
-1.0
CPT0086950003
Tumor
-1.0
CPT0023350003
Tumor
-1.0
CPT0000640003
Tumor
-1.1
CPT0079410003
Tumor
-1.1
CPT0017410003
Tumor
-1.2
CPT0081880003
Tumor
-1.3
CPT0012180003
Tumor
-1.3
CPT0001340003
Tumor
-1.3
CPT0075570001
Normal
-1.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.