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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
221.0
nTPM
GTEx:
221.0
nTPM
FANTOM5:
504.3
Scaled Tags Per Million
Pig:
107.2
nTPM
Mouse:
803.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
221.0
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 221.0
Samples: 105
Max nTPM: 398.0
Min nTPM: 47.4
Std nTPM: 68.8
Median nTPM:
353_1
82 years, female
398.0
352_1
62 years, male
384.4
356_1
87 years, female
378.9
218_1
71 years, female
354.9
163_1
78 years, male
353.2
319_1
81 years, male
352.6
452_1
88 years, female
351.4
351_1
91 years, male
345.7
321_1
62 years, female
335.2
320_1
89 years, female
331.4
354_1
81 years, female
331.1
355_1
70 years, female
326.9
350_1
84 years, female
310.8
377_1
82 years, female
309.0
17_1
71 years, male
291.1
386_1
76 years, male
288.1
177_1
74 years, male
279.5
322_1
76 years, male
279.0
295_1
61 years, female
272.8
349_1
83 years, male
267.1
2_1
77 years, female
264.9
506_1
65 years, male
260.4
394_1
75 years, female
258.1
4_1
88 years, female
255.0
172_1
72 years, female
253.0
376_1
75 years, female
252.5
189_1
76 years, male
251.4
246_1
77 years, male
250.8
293_1
68 years, female
249.0
173_1
67 years, male
248.9
243_1
75 years, male
246.2
35_1
74 years, female
243.0
447_1
81 years, male
241.9
379_1
60 years, male
241.3
286_1
68 years, female
233.5
406_1
79 years, male
233.5
335_1
73 years, female
232.1
6_1
73 years, female
232.0
503_1
68 years, male
229.8
389_1
86 years, female
229.7
318_1
68 years, male
228.6
153_1
70 years, female
228.4
404_1
82 years, female
228.4
251_1
78 years, male
228.1
292_1
71 years, male
226.7
317_1
60 years, male
224.8
526_1
61 years, male
221.6
266_1
85 years, male
221.4
137_1
83 years, male
221.1
375_1
74 years, female
220.5
120_1
70 years, female
220.1
316_1
62 years, male
219.7
41_1
94 years, female
218.1
384_1
83 years, male
217.8
109_1
81 years, female
217.7
311_1
78 years, male
217.1
425_1
59 years, female
215.8
237_1
82 years, male
214.1
139_1
64 years, female
212.8
405_1
91 years, male
212.2
264_1
73 years, female
211.2
126_1
63 years, male
209.6
396_1
62 years, male
209.2
517_1
88 years, male
208.6
347_1
72 years, male
207.3
99_1
64 years, male
206.0
115_1
83 years, male
202.3
518_1
75 years, female
199.7
307_1
66 years, female
199.2
265_1
87 years, male
198.1
480_1
63 years, male
197.6
145_1
84 years, male
195.7
468_1
89 years, male
192.8
288_1
66 years, female
192.7
229_1
69 years, female
191.8
254_1
77 years, female
190.2
313_1
79 years, female
186.8
18_1
88 years, male
186.7
291_1
76 years, male
186.7
499_1
55 years, female
181.3
119_1
70 years, female
181.2
348_1
84 years, male
176.5
315_1
62 years, female
174.2
324_1
76 years, male
167.0
142_1
61 years, female
165.9
117_1
61 years, male
165.5
495_1
57 years, female
165.2
314_1
67 years, male
165.0
308_1
70 years, female
164.3
9_1
66 years, female
160.6
81_1
67 years, male
155.6
217_1
76 years, male
149.5
42_1
85 years, male
147.9
414_1
84 years, female
132.2
89_1
63 years, male
128.5
162_1
79 years, female
127.7
415_1
77 years, female
123.3
32_1
67 years, male
122.9
43_1
64 years, female
119.1
501_1
88 years, male
117.0
466_1
57 years, female
116.7
149_1
88 years, male
98.8
413_1
59 years, female
68.1
491_1
89 years, female
48.9
490_1
67 years, female
47.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.