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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRPT1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
98.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
87.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
81.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
79.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
77.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
76.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
74.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
74.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
71.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
70.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
70.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
67.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
67.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
64.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
62.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
62.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
60.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
60.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
58.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
58.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
58.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
57.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
57.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
57.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
57.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
54.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
53.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
52.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
52.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
52.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
51.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
49.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
49.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
49.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
47.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
46.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
45.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
45.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
44.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
42.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
41.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
41.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
41.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
41.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
39.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
38.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
37.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
35.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
35.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
35.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
34.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
32.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
31.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
31.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
30.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
29.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
28.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
25.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
20.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
19.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
19.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
18.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
18.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRPT1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
152.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
91.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
83.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
79.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
78.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
75.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
70.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
68.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
64.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
62.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
61.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
57.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
55.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
55.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
55.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
54.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
53.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
52.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
52.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
51.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
51.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
50.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
50.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
50.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
50.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
50.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
50.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
49.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
49.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
49.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
49.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
49.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
49.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
49.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
49.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
49.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
49.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
48.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
48.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
48.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
47.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
47.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
47.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
46.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
46.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
46.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
46.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
45.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
45.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
45.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
45.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
45.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
45.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
45.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
44.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
44.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
44.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
44.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
44.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
44.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
44.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
43.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
43.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
43.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
43.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
43.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
43.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
42.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
42.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
42.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
42.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
42.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
42.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
42.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
42.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
42.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
41.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
41.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
41.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
41.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
41.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
41.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
41.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
41.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
41.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
41.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
40.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
40.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
40.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
40.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
40.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
40.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
40.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
40.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
39.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
39.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
39.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
39.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
39.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
39.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
39.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
39.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
39.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
39.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
39.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
39.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
39.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
39.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
39.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
38.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
38.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
38.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
38.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
38.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
38.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
38.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
38.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
38.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
38.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
38.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
38.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
38.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
38.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
38.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
38.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
37.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
37.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
37.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
37.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
37.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
37.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
37.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
37.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
37.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
37.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
37.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
37.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
37.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
36.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
36.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
36.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
36.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
36.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
36.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
36.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
36.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
36.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
36.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
36.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
36.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
36.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
36.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
36.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
35.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
35.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
35.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
35.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
35.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
35.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
35.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
35.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
35.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
35.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
35.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
35.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
35.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
35.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
35.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
34.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
34.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
34.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
34.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
34.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
34.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
34.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
34.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
34.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
34.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
34.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
34.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
34.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
34.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
34.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
34.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
34.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
34.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
34.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
34.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
34.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
33.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
33.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
33.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
33.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
33.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
33.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
33.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
33.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
33.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
33.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
33.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
33.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
33.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
33.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
33.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
33.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
33.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
33.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
33.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
33.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
33.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
33.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
32.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
32.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
32.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
32.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
32.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
32.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
32.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
32.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
32.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
32.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
32.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
32.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
32.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
32.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
32.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
32.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
32.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
32.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
32.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
32.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
32.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
31.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
31.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
31.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
31.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
31.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
31.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
31.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
31.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
31.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
31.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
31.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
31.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
31.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
31.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
31.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
31.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
31.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
31.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
31.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
31.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
31.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
31.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
30.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
30.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
30.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
30.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
30.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
30.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
30.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
30.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
30.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
30.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
30.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
30.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
30.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
30.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
30.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
30.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
30.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
30.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
30.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
30.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
30.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
30.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
30.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
30.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
30.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
30.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
30.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
30.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
30.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
30.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
30.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
29.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
29.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
29.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
29.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
29.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
29.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
29.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
29.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
29.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
29.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
29.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
29.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
29.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
29.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
29.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
29.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
29.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
29.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
29.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
29.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
29.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
29.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
29.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
29.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
29.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
29.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
29.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
29.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
29.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
28.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
28.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
28.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
28.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
28.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
28.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
28.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
28.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
28.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
28.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
28.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
28.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
28.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
28.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
28.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
28.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
28.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
28.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
28.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
28.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
28.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
28.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
28.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
28.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
28.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
27.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
27.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
27.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
27.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
27.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
27.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
27.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
27.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
27.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
27.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
27.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
27.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
27.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
27.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
27.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
27.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
27.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
27.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
27.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
27.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
27.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
27.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
27.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
27.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
27.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
27.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
27.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
27.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
27.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
26.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
26.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
26.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
26.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
26.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
26.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
26.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
26.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
26.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
26.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
26.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
26.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
26.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
26.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
26.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
26.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
26.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
26.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
26.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
26.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
26.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
26.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
26.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
26.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
26.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
26.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
26.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
26.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
26.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
26.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
26.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
26.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
26.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
25.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
25.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
25.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
25.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
25.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
25.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
25.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
25.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
25.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
25.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
25.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
25.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
25.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
25.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
25.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
25.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
25.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
25.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
25.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
25.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
25.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
25.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
24.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
24.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
24.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
24.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
24.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
24.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
24.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
24.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
24.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
24.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
24.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
24.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
24.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
24.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
24.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
24.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
24.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
24.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
24.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
24.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
24.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
23.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
23.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
23.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
23.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
23.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
23.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
23.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
23.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
23.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
22.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
22.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
22.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
22.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
22.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
22.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
22.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
22.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
22.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
22.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
22.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
22.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
22.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
22.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
22.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
22.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
21.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
21.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
21.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
21.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
21.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
21.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
21.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
21.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
21.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
21.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
20.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
20.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
20.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
20.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
20.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
20.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
20.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
19.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
19.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
19.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
19.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
19.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
19.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
19.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
19.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
19.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
18.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
18.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
18.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
18.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
17.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
17.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
16.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
16.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
16.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
15.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
15.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
15.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
15.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
15.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
14.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
14.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
13.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
12.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
6.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRPT1 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
73.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
56.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
51.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
50.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
49.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
48.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
48.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
44.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
43.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
42.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
42.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
41.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
41.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
39.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
39.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
37.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
37.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
37.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
36.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
36.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
35.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
35.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
35.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
35.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
34.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
33.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
33.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
33.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
32.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
32.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
32.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
31.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
31.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
31.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
31.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
31.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
30.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
30.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
30.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
30.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
30.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
30.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
30.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
29.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
29.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
29.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
29.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
29.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
28.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
28.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
28.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
27.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
27.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
27.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
27.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
27.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
27.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
27.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
27.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
27.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
27.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
26.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
26.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
26.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
25.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
25.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
25.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
25.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
24.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
24.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
24.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
24.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
24.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
23.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
23.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
23.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
22.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
22.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
22.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
22.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
22.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
20.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
20.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
20.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
19.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
19.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
18.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
17.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
16.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
16.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
15.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
15.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
15.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
12.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRPT1 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
44.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
134.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
118.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
101.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
101.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
99.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
94.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
92.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
86.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
85.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
85.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
79.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
78.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
76.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
76.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
75.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
73.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
73.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
73.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
72.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
72.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
72.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
70.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
69.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
68.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
68.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
67.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
66.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
66.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
66.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
66.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
65.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
65.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
65.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
63.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
63.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
62.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
62.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
62.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
60.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
60.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
59.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
59.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
59.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
59.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
59.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
58.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
58.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
57.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
56.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
56.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
56.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
55.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
55.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
55.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
54.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
54.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
54.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
54.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
54.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
53.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
53.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
53.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
53.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
53.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
52.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
52.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
52.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
52.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
52.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
52.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
51.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
51.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
51.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
51.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
51.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
50.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
50.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
50.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
50.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
50.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
50.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
49.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
49.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
49.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
49.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
49.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
48.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
48.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
48.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
48.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
48.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
48.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
48.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
47.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
47.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
47.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
47.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
47.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
46.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
46.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
46.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
46.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
45.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
45.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
45.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
45.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
45.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
44.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
44.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
44.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
44.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
44.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
44.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
44.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
44.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
44.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
44.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
44.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
43.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
43.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
43.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
43.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
43.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
42.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
42.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
42.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
42.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
42.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
42.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
42.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
42.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
42.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
42.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
41.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
41.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
41.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
41.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
41.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
41.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
41.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
41.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
41.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
40.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
40.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
40.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
40.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
40.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
40.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
40.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
40.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
40.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
39.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
39.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
39.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
39.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
39.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
39.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
39.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
39.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
39.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
39.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
39.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
39.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
38.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
38.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
38.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
38.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
38.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
38.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
38.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
38.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
38.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
38.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
37.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
37.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
37.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
37.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
37.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
37.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
37.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
37.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
37.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
37.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
37.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
37.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
37.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
36.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
36.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
36.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
36.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
36.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
36.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
36.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
36.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
36.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
36.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
36.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
35.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
35.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
35.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
35.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
35.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
35.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
35.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
35.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
35.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
35.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
35.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
35.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
35.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
34.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
34.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
34.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
34.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
34.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
34.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
34.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
34.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
34.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
33.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
33.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
33.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
33.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
33.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
33.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
32.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
32.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
31.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
31.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
30.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
30.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
30.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
30.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
30.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
30.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
29.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
29.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
29.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
29.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
29.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
28.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
28.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
28.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
28.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
28.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
28.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
28.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
27.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
27.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
27.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
27.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
27.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
27.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
26.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
26.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
26.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
26.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
26.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
25.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
25.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
24.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
24.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
23.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
23.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
23.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
22.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
21.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
21.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
21.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
20.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
20.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
18.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
16.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
13.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
7.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
4.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
4.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078660003
Tumor
0.9
CPT0087040003
Tumor
0.5
CPT0089480003
Normal
0.5
CPT0001230001
Normal
0.4
CPT0088920001
Normal
0.4
CPT0092740003
Normal
0.4
CPT0000660001
Normal
0.4
CPT0001350001
Normal
0.4
CPT0078670001
Normal
0.4
CPT0001220008
Tumor
0.3
CPT0086830003
Normal
0.3
CPT0081620001
Normal
0.3
CPT0088640003
Normal
0.3
CPT0078940001
Normal
0.3
CPT0006950001
Normal
0.3
CPT0088480003
Tumor
0.3
CPT0076350001
Normal
0.3
CPT0006730001
Normal
0.3
CPT0020130001
Normal
0.3
CPT0066430001
Normal
0.3
CPT0065450001
Normal
0.3
CPT0088500001
Normal
0.3
CPT0077140001
Normal
0.3
CPT0089040001
Normal
0.3
CPT0000890001
Normal
0.3
CPT0006530001
Normal
0.3
CPT0079380003
Tumor
0.3
CPT0078840001
Normal
0.3
CPT0079430001
Normal
0.3
CPT0063640001
Normal
0.2
CPT0081600003
Tumor
0.2
CPT0020020001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0078800003
Tumor
0.2
CPT0086970003
Normal
0.2
CPT0000790001
Normal
0.2
CPT0084560003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0017410003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0075720003
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0025610001
Normal
0.2
CPT0079000001
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0026420001
Normal
0.2
CPT0079510001
Normal
0.2
CPT0010110003
Tumor
0.2
CPT0077500001
Normal
0.2
CPT0071150004
Tumor
0.2
CPT0014470001
Normal
0.2
CPT0086890003
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0088630003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0002270011
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0078510003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0079180003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0092290003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0001340003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0076330003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0014450004
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0077320001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0092310003
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0086950003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0001260009
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0077490003
Tumor
-0.2
CPT0086870003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0089020003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0079410003
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0065810003
Tumor
-0.2
CPT0081990003
Tumor
-0.2
CPT0078990003
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0065750003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0065930003
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0069010001
Normal
-0.2
CPT0020120003
Tumor
-0.2
CPT0015730003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0012290003
Normal
-0.3
CPT0007320003
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0092730003
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0023350003
Tumor
-0.3
CPT0001540009
Tumor
-0.3
CPT0019990003
Tumor
-0.3
CPT0012090003
Normal
-0.3
CPT0088900003
Tumor
-0.4
CPT0065870003
Tumor
-0.4
CPT0075560003
Tumor
-0.4
CPT0078930003
Tumor
-0.4
CPT0088760003
Tumor
-0.4
CPT0069160003
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0012280003
Tumor
-0.5
CPT0011410003
Tumor
-0.5
CPT0086030003
Tumor
-0.5
CPT0069000003
Tumor
-0.5
CPT0012550003
Tumor
-0.5
CPT0065690003
Tumor
-0.5
CPT0007860003
Tumor
-0.6
CPT0088690003
Tumor
-0.6
CPT0088550004
Tumor
-0.7
CPT0025170003
Tumor
-0.7
CPT0025290003
Tumor
-0.7
CPT0012080003
Tumor
-0.8
CPT0012670003
Tumor
-0.9
CPT0017850003
Tumor
-0.9
CPT0081880003
Tumor
-0.9
CPT0018250001
Normal
-1.0
CPT0012180003
Tumor
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
