HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:21.5 nTPM
HPA Brain:42.0 nTPM
GTEx:21.5 nTPM
FANTOM5:54.8 Scaled Tags Per Million
Pig:22.4 nTPM
Mouse:47.6 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052352
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 42.0
Sample id Sample description nTPM
Hippocampus
nTPM: 39.5
1911 Female, age 85, right hemisphere 41.9
1898 Male, age 80, left hemisphere 40.3
2148 Female, age 91, left hemisphere 39.1
1855 Male, age 76, left hemisphere 39.0
2529 Female, age 94, left hemisphere 38.6
2621 Female, age 67, right hemisphere 38.1
Dentate gyrus
nTPM: 42.0
2010 Male, age 76, both hemispheres 44.5
2528 Male, age 74, both hemispheres 44.3
2530 Female, age 94, left hemisphere 43.5
2531 Female, age 67, both hemispheres 41.9
2246 Female, age 85, both hemispheres 41.8
1927 Female, age 91, both hemispheres 36.2
Entorhinal gyrus
nTPM: 39.3
2764 Male, age 80, right hemisphere 42.9
2613 Female, age 94, left hemisphere 41.2
2686 Male, age 75, right hemisphere 39.5
1938 Female, age 85, left hemisphere 38.9
1787 Male, age 76, left hemisphere 37.9
2117 Female, age 91, right hemisphere 35.2
Hippocampus, CA1
nTPM: 41.1
2749 Male, age 80, left hemisphere 44.5
2045 Male, age 76, both hemispheres 42.5
1873 Female, age 85, both hemispheres 40.4
2527 Male, age 74, both hemispheres 39.4
2082 Female, age 91, right hemisphere 38.4
Hippocampus, CA2
nTPM: 39.3
2437 Female, age 94, left hemisphere 43.0
1963 Male, age 80, left hemisphere 41.3
1940 Female, age 85, left hemisphere 41.1
2249 Male, age 74, both hemispheres 38.0
1892 Male, age 76, both hemispheres 37.6
2113 Female, age 91, right hemisphere 34.5
Hippocampus, CA3
nTPM: 41.5
2620 Female, age 94, left hemisphere 49.4
2861 Female, age 67, both hemispheres 45.1
2137 Male, age 80, left hemisphere 42.0
1891 Female, age 85, both hemispheres 40.2
1867 Male, age 76, both hemispheres 39.3
2436 Male, age 74, both hemispheres 33.0
Parahippocampal cortex
nTPM: 36.7
2692 Male, age 74, both hemispheres 42.2
2532 Female, age 72, left hemisphere 41.4
2622 Female, age 67, right hemisphere 39.1
2693 Female, age 94, both hemispheres 38.7
1933 Female, age 85, both hemispheres 37.7
2018 Male, age 76, both hemispheres 35.7
1990 Female, age 91, right hemisphere 34.9
2245 Female, age 91, both hemispheres 34.6
1850 Male, age 80, both hemispheres 34.0
2250 Female, age 67, right hemisphere 29.1
Perirhinal gyrus
nTPM: 35.4
2521 Female, age 94, right hemisphere 39.6
1794 Male, age 80, right hemisphere 35.4
2848 Male, age 76, right hemisphere 35.1
1841 Female, age 85, right hemisphere 34.7
1847 Female, age 91, left hemisphere 31.9
Subiculum
nTPM: 40.7
1901 Male, age 80, both hemispheres 44.4
2042 Male, age 76, both hemispheres 41.8
2438 Female, age 94, left hemisphere 40.3
2619 Male, age 74, both hemispheres 40.3
1977 Female, age 85, both hemispheres 38.9
2729 Female, age 91, right hemisphere 38.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 21.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.5
Samples: 197

Max nTPM: 34.9
Min nTPM: 9.2
Std nTPM: 4.6
Median nTPM: 21.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 34.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 34.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 34.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 29.8
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 29.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 29.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 29.2
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 29.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 29.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 29.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 29.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 54.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.8
FF:10169-103B7 60 years, female 66.4
FF:10153-102I9 76 years, female 43.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 22.4
Pig sample Sample description nTPM
Subiculum
nTPM: 19.6
Samples: 4

Max nTPM: 23.8
Min nTPM: 17.1
Sample A Female 23.8
Sample B Female 17.4
Sample C Male 20.2
Sample D Male 17.1
Dorsal hippocampus
nTPM: 22.4
Samples: 4

Max nTPM: 25.3
Min nTPM: 16.8
Sample A Female 25.3
Sample B Female 24.2
Sample C Male 23.2
Sample D Male 16.8
Entorhinal cortex
nTPM: 18.6
Samples: 4

Max nTPM: 20.3
Min nTPM: 16.4
Sample A Female 20.3
Sample B Female 16.4
Sample C Male 19.3
Sample D Male 18.4
Ventral hippocampus
nTPM: 22.3
Samples: 4

Max nTPM: 28.4
Min nTPM: 15.3
Sample A Female 21.7
Sample B Female 15.3
Sample C Male 28.4
Sample D Male 23.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 47.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.6
Samples: 4

Max nTPM: 52.6
Min nTPM: 41.4
Sample A Male 47.4
Sample B Male 41.4
Sample C Female 49.1
Sample D Female 52.6
Hippocampal formation
nTPM: 45.0
Samples: 4

Max nTPM: 52.9
Min nTPM: 36.3
Sample A Male 36.3
Sample B Male 43.3
Sample C Female 52.9
Sample D Female 47.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
68161475 Antisense, RP_041122_01_E05, Mouse strain C57BL/6J (56 days, male) 2.6

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