HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:399.6 nTPM
HPA Brain:119.4 nTPM
GTEx:399.6 nTPM
FANTOM5:239.4 Scaled Tags Per Million
Pig:145.8 nTPM
Mouse:399.6 nTPM
Allen mouse:22.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA076844
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 119.4
Sample id Sample description nTPM
Hippocampus
nTPM: 101.7
1898 Male, age 80, left hemisphere 128.3
2621 Female, age 67, right hemisphere 106.2
2529 Female, age 94, left hemisphere 104.1
1911 Female, age 85, right hemisphere 94.0
2148 Female, age 91, left hemisphere 88.8
1855 Male, age 76, left hemisphere 88.6
Dentate gyrus
nTPM: 102.0
2010 Male, age 76, both hemispheres 124.1
2530 Female, age 94, left hemisphere 123.3
1927 Female, age 91, both hemispheres 96.2
2246 Female, age 85, both hemispheres 93.8
2528 Male, age 74, both hemispheres 89.7
2531 Female, age 67, both hemispheres 85.2
Entorhinal gyrus
nTPM: 116.2
2764 Male, age 80, right hemisphere 126.1
2117 Female, age 91, right hemisphere 125.1
1938 Female, age 85, left hemisphere 123.4
1787 Male, age 76, left hemisphere 120.2
2686 Male, age 75, right hemisphere 104.6
2613 Female, age 94, left hemisphere 97.8
Hippocampus, CA1
nTPM: 97.8
2749 Male, age 80, left hemisphere 118.9
1873 Female, age 85, both hemispheres 106.4
2045 Male, age 76, both hemispheres 91.2
2527 Male, age 74, both hemispheres 90.9
2082 Female, age 91, right hemisphere 81.7
Hippocampus, CA2
nTPM: 111.1
1963 Male, age 80, left hemisphere 145.0
1892 Male, age 76, both hemispheres 128.8
2437 Female, age 94, left hemisphere 120.2
2249 Male, age 74, both hemispheres 98.7
1940 Female, age 85, left hemisphere 91.8
2113 Female, age 91, right hemisphere 82.1
Hippocampus, CA3
nTPM: 96.3
1867 Male, age 76, both hemispheres 127.7
1891 Female, age 85, both hemispheres 124.5
2137 Male, age 80, left hemisphere 94.3
2620 Female, age 94, left hemisphere 88.0
2436 Male, age 74, both hemispheres 71.9
2861 Female, age 67, both hemispheres 71.6
Parahippocampal cortex
nTPM: 100.5
1850 Male, age 80, both hemispheres 121.0
1990 Female, age 91, right hemisphere 119.7
2018 Male, age 76, both hemispheres 118.8
2532 Female, age 72, left hemisphere 111.0
2692 Male, age 74, both hemispheres 106.6
1933 Female, age 85, both hemispheres 102.3
2245 Female, age 91, both hemispheres 91.1
2693 Female, age 94, both hemispheres 84.8
2250 Female, age 67, right hemisphere 75.9
2622 Female, age 67, right hemisphere 74.3
Perirhinal gyrus
nTPM: 107.2
1794 Male, age 80, right hemisphere 113.3
2848 Male, age 76, right hemisphere 112.5
1841 Female, age 85, right hemisphere 110.1
1847 Female, age 91, left hemisphere 104.8
2521 Female, age 94, right hemisphere 95.3
Subiculum
nTPM: 119.4
2042 Male, age 76, both hemispheres 138.3
1901 Male, age 80, both hemispheres 136.8
2438 Female, age 94, left hemisphere 134.0
1977 Female, age 85, both hemispheres 125.9
2619 Male, age 74, both hemispheres 97.5
2729 Female, age 91, right hemisphere 84.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 399.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 399.6
Samples: 197

Max nTPM: 884.2
Min nTPM: 90.7
Std nTPM: 129.4
Median nTPM: 387.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 884.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 800.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 796.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 758.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 736.1
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 734.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 716.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 691.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 686.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 672.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 611.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 239.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 239.4
FF:10153-102I9 76 years, female 287.7
FF:10169-103B7 60 years, female 191.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 145.8
Pig sample Sample description nTPM
Subiculum
nTPM: 86.6
Samples: 4

Max nTPM: 104.9
Min nTPM: 74.0
Sample A Female 104.9
Sample B Female 88.5
Sample C Male 79.1
Sample D Male 74.0
Dorsal hippocampus
nTPM: 145.8
Samples: 4

Max nTPM: 206.7
Min nTPM: 86.9
Sample A Female 206.7
Sample B Female 128.6
Sample C Male 161.0
Sample D Male 86.9
Entorhinal cortex
nTPM: 91.7
Samples: 4

Max nTPM: 120.5
Min nTPM: 75.3
Sample A Female 90.5
Sample B Female 120.5
Sample C Male 75.3
Sample D Male 80.4
Ventral hippocampus
nTPM: 120.3
Samples: 4

Max nTPM: 144.8
Min nTPM: 80.7
Sample A Female 125.5
Sample B Female 80.7
Sample C Male 130.3
Sample D Male 144.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 399.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 346.7
Samples: 4

Max nTPM: 369.1
Min nTPM: 292.5
Sample A Male 367.3
Sample B Male 369.1
Sample C Female 357.7
Sample D Female 292.5
Hippocampal formation
nTPM: 399.6
Samples: 4

Max nTPM: 424.0
Min nTPM: 379.7
Sample A Male 424.0
Sample B Male 379.7
Sample C Female 399.1
Sample D Female 395.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 22.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.2
68632051 Antisense, RP_050125_01_F03, Mouse strain C57BL/6J (56 days, male) 22.2

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