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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
43.5
nTPM
GTEx:
43.5
nTPM
FANTOM5:
40.6
Scaled Tags Per Million
Pig:
39.8
nTPM
Mouse:
78.1
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
43.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 43.5
Samples: 105
Max nTPM: 100.4
Min nTPM: 16.1
Std nTPM: 17.3
Median nTPM:
321_1
62 years, female
100.4
218_1
71 years, female
92.3
163_1
78 years, male
87.4
356_1
87 years, female
78.5
349_1
83 years, male
77.9
353_1
82 years, female
75.1
350_1
84 years, female
74.5
237_1
82 years, male
71.9
376_1
75 years, female
66.0
243_1
75 years, male
65.1
335_1
73 years, female
64.7
172_1
72 years, female
63.0
425_1
59 years, female
62.7
480_1
63 years, male
61.9
354_1
81 years, female
61.0
316_1
62 years, male
59.8
386_1
76 years, male
59.3
286_1
68 years, female
59.0
447_1
81 years, male
59.0
352_1
62 years, male
58.8
319_1
81 years, male
58.7
375_1
74 years, female
57.9
99_1
64 years, male
57.7
351_1
91 years, male
57.2
229_1
69 years, female
56.6
177_1
74 years, male
56.0
347_1
72 years, male
55.7
355_1
70 years, female
55.5
292_1
71 years, male
54.4
293_1
68 years, female
54.2
324_1
76 years, male
53.9
320_1
89 years, female
53.4
503_1
68 years, male
52.3
506_1
65 years, male
52.2
406_1
79 years, male
52.0
394_1
75 years, female
50.9
517_1
88 years, male
50.7
318_1
68 years, male
50.0
404_1
82 years, female
50.0
173_1
67 years, male
48.2
322_1
76 years, male
46.1
468_1
89 years, male
46.0
291_1
76 years, male
44.4
379_1
60 years, male
44.2
396_1
62 years, male
43.1
6_1
73 years, female
42.8
499_1
55 years, female
42.3
452_1
88 years, female
42.1
389_1
86 years, female
41.9
265_1
87 years, male
41.5
266_1
85 years, male
40.4
313_1
79 years, female
40.1
295_1
61 years, female
39.6
348_1
84 years, male
39.4
526_1
61 years, male
39.4
117_1
61 years, male
38.7
311_1
78 years, male
38.0
415_1
77 years, female
37.9
246_1
77 years, male
37.7
189_1
76 years, male
37.5
518_1
75 years, female
37.5
317_1
60 years, male
36.5
217_1
76 years, male
36.1
405_1
91 years, male
35.9
384_1
83 years, male
35.7
115_1
83 years, male
34.5
314_1
67 years, male
34.3
264_1
73 years, female
34.1
142_1
61 years, female
34.0
35_1
74 years, female
33.7
137_1
83 years, male
33.3
153_1
70 years, female
33.2
377_1
82 years, female
32.7
145_1
84 years, male
32.6
251_1
78 years, male
32.4
307_1
66 years, female
31.8
32_1
67 years, male
31.0
81_1
67 years, male
30.9
414_1
84 years, female
30.8
126_1
63 years, male
30.7
288_1
66 years, female
30.6
315_1
62 years, female
29.9
254_1
77 years, female
29.5
9_1
66 years, female
29.2
120_1
70 years, female
27.3
18_1
88 years, male
26.6
466_1
57 years, female
26.4
17_1
71 years, male
26.1
413_1
59 years, female
25.6
43_1
64 years, female
25.5
109_1
81 years, female
25.3
490_1
67 years, female
25.3
42_1
85 years, male
24.8
41_1
94 years, female
24.7
4_1
88 years, female
23.6
162_1
79 years, female
23.2
495_1
57 years, female
22.8
139_1
64 years, female
21.9
119_1
70 years, female
20.8
2_1
77 years, female
19.1
89_1
63 years, male
17.5
149_1
88 years, male
17.5
501_1
88 years, male
17.3
308_1
70 years, female
16.1
491_1
89 years, female
16.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
