HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:2.9 nTPM
HPA Brain:45.4 nTPM
GTEx:2.9 nTPM
FANTOM5:43.2 Scaled Tags Per Million
Pig:30.3 nTPM
Mouse:17.0 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019521Antibody HPA065961
Glial cells MediumNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 45.4
Sample id Sample description nTPM
Hippocampus
nTPM: 43.0
2148 Female, age 91, left hemisphere 53.0
1855 Male, age 76, left hemisphere 50.4
1898 Male, age 80, left hemisphere 47.3
1911 Female, age 85, right hemisphere 45.2
2529 Female, age 94, left hemisphere 31.4
2621 Female, age 67, right hemisphere 30.6
Dentate gyrus
nTPM: 44.0
2531 Female, age 67, both hemispheres 56.1
2528 Male, age 74, both hemispheres 56.0
1927 Female, age 91, both hemispheres 41.9
2246 Female, age 85, both hemispheres 38.4
2530 Female, age 94, left hemisphere 37.9
2010 Male, age 76, both hemispheres 33.9
Entorhinal gyrus
nTPM: 36.8
1938 Female, age 85, left hemisphere 43.8
2764 Male, age 80, right hemisphere 40.6
1787 Male, age 76, left hemisphere 40.4
2117 Female, age 91, right hemisphere 37.4
2613 Female, age 94, left hemisphere 29.5
2686 Male, age 75, right hemisphere 29.2
Hippocampus, CA1
nTPM: 45.4
2082 Female, age 91, right hemisphere 58.9
1873 Female, age 85, both hemispheres 45.8
2527 Male, age 74, both hemispheres 43.1
2045 Male, age 76, both hemispheres 42.4
2749 Male, age 80, left hemisphere 36.6
Hippocampus, CA2
nTPM: 43.4
1940 Female, age 85, left hemisphere 59.3
1963 Male, age 80, left hemisphere 48.2
2249 Male, age 74, both hemispheres 46.4
2113 Female, age 91, right hemisphere 43.3
1892 Male, age 76, both hemispheres 32.3
2437 Female, age 94, left hemisphere 30.9
Hippocampus, CA3
nTPM: 44.6
2861 Female, age 67, both hemispheres 58.5
2620 Female, age 94, left hemisphere 55.1
2137 Male, age 80, left hemisphere 45.4
2436 Male, age 74, both hemispheres 39.9
1891 Female, age 85, both hemispheres 34.8
1867 Male, age 76, both hemispheres 33.8
Parahippocampal cortex
nTPM: 41.6
2250 Female, age 67, right hemisphere 54.2
1933 Female, age 85, both hemispheres 50.6
2693 Female, age 94, both hemispheres 47.3
2622 Female, age 67, right hemisphere 45.5
2532 Female, age 72, left hemisphere 40.8
1850 Male, age 80, both hemispheres 40.3
2245 Female, age 91, both hemispheres 39.2
1990 Female, age 91, right hemisphere 36.6
2018 Male, age 76, both hemispheres 35.8
2692 Male, age 74, both hemispheres 25.5
Perirhinal gyrus
nTPM: 40.7
2521 Female, age 94, right hemisphere 46.2
1847 Female, age 91, left hemisphere 44.0
1841 Female, age 85, right hemisphere 40.6
1794 Male, age 80, right hemisphere 37.3
2848 Male, age 76, right hemisphere 35.5
Subiculum
nTPM: 35.3
2729 Female, age 91, right hemisphere 47.3
1977 Female, age 85, both hemispheres 44.9
1901 Male, age 80, both hemispheres 38.4
2619 Male, age 74, both hemispheres 38.3
2042 Male, age 76, both hemispheres 31.1
2438 Female, age 94, left hemisphere 11.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 2.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.9
Samples: 197

Max nTPM: 8.3
Min nTPM: 0.6
Std nTPM: 1.3
Median nTPM: 2.7
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 8.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 7.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 7.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 6.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 6.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 5.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 5.8
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 5.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 5.3
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 5.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 5.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 43.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.2
FF:10153-102I9 76 years, female 50.0
FF:10169-103B7 60 years, female 36.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 30.3
Pig sample Sample description nTPM
Subiculum
nTPM: 21.5
Samples: 4

Max nTPM: 27.2
Min nTPM: 16.8
Sample A Female 27.2
Sample B Female 18.7
Sample C Male 23.1
Sample D Male 16.8
Dorsal hippocampus
nTPM: 17.2
Samples: 4

Max nTPM: 22.3
Min nTPM: 11.3
Sample A Female 22.3
Sample B Female 20.0
Sample C Male 15.2
Sample D Male 11.3
Entorhinal cortex
nTPM: 18.6
Samples: 4

Max nTPM: 20.6
Min nTPM: 16.8
Sample A Female 20.6
Sample B Female 17.0
Sample C Male 16.8
Sample D Male 19.8
Ventral hippocampus
nTPM: 30.3
Samples: 4

Max nTPM: 44.6
Min nTPM: 18.2
Sample A Female 35.2
Sample B Female 18.2
Sample C Male 44.6
Sample D Male 23.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 17.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.0
Samples: 4

Max nTPM: 27.8
Min nTPM: 12.5
Sample A Male 14.9
Sample B Male 12.7
Sample C Female 12.5
Sample D Female 27.8
Hippocampal formation
nTPM: 11.2
Samples: 4

Max nTPM: 13.2
Min nTPM: 8.3
Sample A Male 8.3
Sample B Male 13.2
Sample C Female 13.2
Sample D Female 10.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
754 Antisense, RP_Baylor_103146, Mouse strain C57BL/6J (56 days, male) 1.5
755 Antisense, RP_Baylor_103146, Mouse strain C57BL/6J (56 days, male) 1.3

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