HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:7.6 nTPM
HPA Brain:13.4 nTPM
GTEx:7.6 nTPM
FANTOM5:15.2 Scaled Tags Per Million
Pig:12.2 nTPM
Mouse:8.2 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038511
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 13.4
Sample id Sample description nTPM
Hippocampus
nTPM: 12.7
2621 Female, age 67, right hemisphere 14.6
2148 Female, age 91, left hemisphere 12.8
1911 Female, age 85, right hemisphere 12.7
1898 Male, age 80, left hemisphere 12.4
1855 Male, age 76, left hemisphere 12.2
2529 Female, age 94, left hemisphere 11.6
Dentate gyrus
nTPM: 12.0
2246 Female, age 85, both hemispheres 13.0
2530 Female, age 94, left hemisphere 12.6
2531 Female, age 67, both hemispheres 12.1
1927 Female, age 91, both hemispheres 12.0
2528 Male, age 74, both hemispheres 11.8
2010 Male, age 76, both hemispheres 10.3
Entorhinal gyrus
nTPM: 12.9
2613 Female, age 94, left hemisphere 14.2
2686 Male, age 75, right hemisphere 14.1
2764 Male, age 80, right hemisphere 13.3
2117 Female, age 91, right hemisphere 12.2
1787 Male, age 76, left hemisphere 12.1
1938 Female, age 85, left hemisphere 11.5
Hippocampus, CA1
nTPM: 12.2
2749 Male, age 80, left hemisphere 14.8
2082 Female, age 91, right hemisphere 12.6
2527 Male, age 74, both hemispheres 12.0
1873 Female, age 85, both hemispheres 11.8
2045 Male, age 76, both hemispheres 9.9
Hippocampus, CA2
nTPM: 12.0
1940 Female, age 85, left hemisphere 13.4
2113 Female, age 91, right hemisphere 12.4
2437 Female, age 94, left hemisphere 12.3
1963 Male, age 80, left hemisphere 12.0
2249 Male, age 74, both hemispheres 11.1
1892 Male, age 76, both hemispheres 10.8
Hippocampus, CA3
nTPM: 13.4
2137 Male, age 80, left hemisphere 15.1
2620 Female, age 94, left hemisphere 15.0
2436 Male, age 74, both hemispheres 13.3
1891 Female, age 85, both hemispheres 12.6
1867 Male, age 76, both hemispheres 12.2
2861 Female, age 67, both hemispheres 12.1
Parahippocampal cortex
nTPM: 12.7
2245 Female, age 91, both hemispheres 13.8
2532 Female, age 72, left hemisphere 13.4
2622 Female, age 67, right hemisphere 13.4
1850 Male, age 80, both hemispheres 12.7
2018 Male, age 76, both hemispheres 12.7
1990 Female, age 91, right hemisphere 12.5
2693 Female, age 94, both hemispheres 12.5
2250 Female, age 67, right hemisphere 12.4
2692 Male, age 74, both hemispheres 12.3
1933 Female, age 85, both hemispheres 11.7
Perirhinal gyrus
nTPM: 12.1
1841 Female, age 85, right hemisphere 12.7
1794 Male, age 80, right hemisphere 12.5
1847 Female, age 91, left hemisphere 12.3
2521 Female, age 94, right hemisphere 12.3
2848 Male, age 76, right hemisphere 10.5
Subiculum
nTPM: 13.1
1901 Male, age 80, both hemispheres 14.4
2042 Male, age 76, both hemispheres 14.2
1977 Female, age 85, both hemispheres 13.1
2619 Male, age 74, both hemispheres 12.8
2438 Female, age 94, left hemisphere 12.3
2729 Female, age 91, right hemisphere 12.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 7.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.6
Samples: 197

Max nTPM: 19.4
Min nTPM: 3.2
Std nTPM: 2.2
Median nTPM: 7.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 19.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 15.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 15.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 15.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 15.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 14.8
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 14.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 14.2
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 13.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 13.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 12.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 15.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.2
FF:10169-103B7 60 years, female 16.6
FF:10153-102I9 76 years, female 13.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 12.2
Pig sample Sample description nTPM
Subiculum
nTPM: 11.0
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.4
Sample A Female 12.3
Sample B Female 9.4
Sample C Male 11.6
Sample D Male 10.5
Dorsal hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 12.2
Min nTPM: 10.3
Sample A Female 12.2
Sample B Female 11.5
Sample C Male 10.9
Sample D Male 10.3
Entorhinal cortex
nTPM: 12.2
Samples: 4

Max nTPM: 14.6
Min nTPM: 10.1
Sample A Female 14.6
Sample B Female 10.1
Sample C Male 12.2
Sample D Male 12.0
Ventral hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 14.2
Min nTPM: 8.1
Sample A Female 10.8
Sample B Female 8.1
Sample C Male 14.2
Sample D Male 11.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 8.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.2
Samples: 4

Max nTPM: 8.8
Min nTPM: 7.7
Sample A Male 8.2
Sample B Male 8.8
Sample C Female 7.7
Sample D Female 8.2
Hippocampal formation
nTPM: 7.9
Samples: 4

Max nTPM: 9.1
Min nTPM: 6.4
Sample A Male 6.4
Sample B Male 9.1
Sample C Female 8.0
Sample D Female 8.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
513021 Antisense, RP_040810_01_A12, Mouse strain C57BL/6J (56 days, male) 3.4

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