HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:22.3 nTPM
HPA Brain:24.3 nTPM
GTEx:22.3 nTPM
FANTOM5:24.8 Scaled Tags Per Million
Pig:19.0 nTPM
Mouse:41.5 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027933
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 24.3
Sample id Sample description nTPM
Hippocampus
nTPM: 22.8
2148 Female, age 91, left hemisphere 25.6
1911 Female, age 85, right hemisphere 23.4
2621 Female, age 67, right hemisphere 23.4
2529 Female, age 94, left hemisphere 22.8
1855 Male, age 76, left hemisphere 21.3
1898 Male, age 80, left hemisphere 20.2
Dentate gyrus
nTPM: 22.6
1927 Female, age 91, both hemispheres 24.8
2246 Female, age 85, both hemispheres 23.4
2530 Female, age 94, left hemisphere 22.8
2528 Male, age 74, both hemispheres 22.6
2531 Female, age 67, both hemispheres 22.1
2010 Male, age 76, both hemispheres 19.9
Entorhinal gyrus
nTPM: 22.9
1938 Female, age 85, left hemisphere 24.7
2117 Female, age 91, right hemisphere 23.6
2686 Male, age 75, right hemisphere 23.2
1787 Male, age 76, left hemisphere 22.4
2764 Male, age 80, right hemisphere 21.7
2613 Female, age 94, left hemisphere 21.6
Hippocampus, CA1
nTPM: 23.6
2527 Male, age 74, both hemispheres 26.8
2749 Male, age 80, left hemisphere 26.8
2045 Male, age 76, both hemispheres 22.2
1873 Female, age 85, both hemispheres 21.6
2082 Female, age 91, right hemisphere 20.5
Hippocampus, CA2
nTPM: 22.4
1963 Male, age 80, left hemisphere 24.0
1892 Male, age 76, both hemispheres 23.9
2249 Male, age 74, both hemispheres 23.7
2437 Female, age 94, left hemisphere 23.3
2113 Female, age 91, right hemisphere 22.9
1940 Female, age 85, left hemisphere 16.4
Hippocampus, CA3
nTPM: 24.3
2137 Male, age 80, left hemisphere 27.8
2861 Female, age 67, both hemispheres 24.7
1867 Male, age 76, both hemispheres 24.4
2620 Female, age 94, left hemisphere 24.2
1891 Female, age 85, both hemispheres 22.5
2436 Male, age 74, both hemispheres 22.4
Parahippocampal cortex
nTPM: 23.3
2692 Male, age 74, both hemispheres 27.5
2250 Female, age 67, right hemisphere 25.2
2245 Female, age 91, both hemispheres 25.0
1990 Female, age 91, right hemisphere 24.0
2622 Female, age 67, right hemisphere 23.8
1933 Female, age 85, both hemispheres 22.3
2693 Female, age 94, both hemispheres 21.6
2018 Male, age 76, both hemispheres 21.5
2532 Female, age 72, left hemisphere 21.0
1850 Male, age 80, both hemispheres 20.6
Perirhinal gyrus
nTPM: 21.9
1847 Female, age 91, left hemisphere 24.5
1841 Female, age 85, right hemisphere 22.0
2521 Female, age 94, right hemisphere 22.0
1794 Male, age 80, right hemisphere 20.7
2848 Male, age 76, right hemisphere 20.2
Subiculum
nTPM: 23.1
2438 Female, age 94, left hemisphere 25.3
2619 Male, age 74, both hemispheres 24.3
2729 Female, age 91, right hemisphere 23.8
1977 Female, age 85, both hemispheres 23.0
1901 Male, age 80, both hemispheres 21.6
2042 Male, age 76, both hemispheres 20.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 22.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.3
Samples: 197

Max nTPM: 42.5
Min nTPM: 10.6
Std nTPM: 6.8
Median nTPM: 21.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 42.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 41.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 40.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 40.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 39.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 39.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 38.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 37.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 37.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 36.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 36.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 24.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.8
FF:10169-103B7 60 years, female 25.9
FF:10153-102I9 76 years, female 23.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 19.0
Pig sample Sample description nTPM
Subiculum
nTPM: 15.1
Samples: 4

Max nTPM: 23.5
Min nTPM: 10.7
Sample A Female 23.5
Sample B Female 11.0
Sample C Male 10.7
Sample D Male 15.0
Dorsal hippocampus
nTPM: 19.0
Samples: 4

Max nTPM: 26.8
Min nTPM: 14.7
Sample A Female 26.8
Sample B Female 15.8
Sample C Male 14.7
Sample D Male 18.5
Entorhinal cortex
nTPM: 15.5
Samples: 4

Max nTPM: 16.8
Min nTPM: 14.5
Sample A Female 16.8
Sample B Female 15.4
Sample C Male 14.5
Sample D Male 15.2
Ventral hippocampus
nTPM: 16.7
Samples: 4

Max nTPM: 23.1
Min nTPM: 10.2
Sample A Female 23.1
Sample B Female 10.2
Sample C Male 13.9
Sample D Male 19.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 41.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.7
Samples: 4

Max nTPM: 32.1
Min nTPM: 26.6
Sample A Male 31.6
Sample B Male 28.6
Sample C Female 32.1
Sample D Female 26.6
Hippocampal formation
nTPM: 41.5
Samples: 4

Max nTPM: 45.4
Min nTPM: 37.1
Sample A Male 45.4
Sample B Male 37.1
Sample C Female 42.1
Sample D Female 41.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
76135795 Antisense, RP_060530_02_G08, Mouse strain C57BL/6J (56 days, male) 3.6
79360298 Antisense, RP_071018_01_H04, Mouse strain C57BL/6J (56 days, male) 1.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org