HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:6.6 nTPM
HPA Brain:15.1 nTPM
GTEx:6.6 nTPM
FANTOM5:11.3 Scaled Tags Per Million
Pig:14.0 nTPM
Mouse:38.6 nTPM
Allen mouse:9.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041363
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 15.1
Sample id Sample description nTPM
Hippocampus
nTPM: 15.1
1898 Male, age 80, left hemisphere 18.3
2529 Female, age 94, left hemisphere 17.8
2148 Female, age 91, left hemisphere 17.7
1855 Male, age 76, left hemisphere 13.2
2621 Female, age 67, right hemisphere 12.1
1911 Female, age 85, right hemisphere 11.2
Dentate gyrus
nTPM: 14.9
2530 Female, age 94, left hemisphere 18.8
1927 Female, age 91, both hemispheres 16.2
2531 Female, age 67, both hemispheres 14.5
2528 Male, age 74, both hemispheres 13.7
2010 Male, age 76, both hemispheres 13.2
2246 Female, age 85, both hemispheres 13.2
Entorhinal gyrus
nTPM: 14.8
2764 Male, age 80, right hemisphere 18.1
2613 Female, age 94, left hemisphere 15.7
2686 Male, age 75, right hemisphere 15.7
1787 Male, age 76, left hemisphere 13.7
2117 Female, age 91, right hemisphere 13.1
1938 Female, age 85, left hemisphere 12.3
Hippocampus, CA1
nTPM: 13.9
2749 Male, age 80, left hemisphere 16.7
1873 Female, age 85, both hemispheres 14.7
2527 Male, age 74, both hemispheres 14.4
2082 Female, age 91, right hemisphere 12.9
2045 Male, age 76, both hemispheres 10.7
Hippocampus, CA2
nTPM: 13.8
1892 Male, age 76, both hemispheres 17.1
1963 Male, age 80, left hemisphere 16.7
2437 Female, age 94, left hemisphere 12.8
2113 Female, age 91, right hemisphere 12.7
1940 Female, age 85, left hemisphere 11.8
2249 Male, age 74, both hemispheres 11.3
Hippocampus, CA3
nTPM: 14.8
2861 Female, age 67, both hemispheres 19.4
1867 Male, age 76, both hemispheres 15.3
2436 Male, age 74, both hemispheres 14.5
2137 Male, age 80, left hemisphere 13.9
2620 Female, age 94, left hemisphere 13.0
1891 Female, age 85, both hemispheres 12.7
Parahippocampal cortex
nTPM: 13.5
1990 Female, age 91, right hemisphere 15.7
1933 Female, age 85, both hemispheres 15.1
2622 Female, age 67, right hemisphere 14.7
2532 Female, age 72, left hemisphere 14.2
1850 Male, age 80, both hemispheres 13.8
2692 Male, age 74, both hemispheres 13.1
2018 Male, age 76, both hemispheres 12.5
2693 Female, age 94, both hemispheres 12.5
2245 Female, age 91, both hemispheres 11.8
2250 Female, age 67, right hemisphere 11.2
Perirhinal gyrus
nTPM: 14.3
1794 Male, age 80, right hemisphere 16.3
1847 Female, age 91, left hemisphere 15.4
2521 Female, age 94, right hemisphere 14.7
1841 Female, age 85, right hemisphere 14.1
2848 Male, age 76, right hemisphere 11.0
Subiculum
nTPM: 13.3
2619 Male, age 74, both hemispheres 15.2
1901 Male, age 80, both hemispheres 15.1
1977 Female, age 85, both hemispheres 14.2
2729 Female, age 91, right hemisphere 14.2
2042 Male, age 76, both hemispheres 11.2
2438 Female, age 94, left hemisphere 10.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 6.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.6
Samples: 197

Max nTPM: 18.3
Min nTPM: 2.2
Std nTPM: 2.3
Median nTPM: 6.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 18.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 14.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 13.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 13.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 12.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 11.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 11.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 11.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 11.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 11.1
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 11.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 11.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.3
FF:10169-103B7 60 years, female 11.4
FF:10153-102I9 76 years, female 11.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 14.0
Pig sample Sample description nTPM
Subiculum
nTPM: 11.4
Samples: 4

Max nTPM: 14.5
Min nTPM: 8.8
Sample A Female 14.5
Sample B Female 10.0
Sample C Male 12.4
Sample D Male 8.8
Dorsal hippocampus
nTPM: 13.3
Samples: 4

Max nTPM: 15.9
Min nTPM: 10.1
Sample A Female 15.9
Sample B Female 14.4
Sample C Male 12.8
Sample D Male 10.1
Entorhinal cortex
nTPM: 11.5
Samples: 4

Max nTPM: 12.4
Min nTPM: 10.4
Sample A Female 12.1
Sample B Female 11.2
Sample C Male 12.4
Sample D Male 10.4
Ventral hippocampus
nTPM: 14.0
Samples: 4

Max nTPM: 17.5
Min nTPM: 10.1
Sample A Female 15.3
Sample B Female 10.1
Sample C Male 17.5
Sample D Male 13.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 38.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.6
Samples: 4

Max nTPM: 39.8
Min nTPM: 38.1
Sample A Male 38.1
Sample B Male 39.8
Sample C Female 38.4
Sample D Female 38.2
Hippocampal formation
nTPM: 38.7
Samples: 4

Max nTPM: 40.2
Min nTPM: 36.9
Sample A Male 36.9
Sample B Male 38.6
Sample C Female 40.2
Sample D Female 38.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
69013326 Antisense, RP_050309_02_C06, Mouse strain C57BL/6J (56 days, male) 9.2

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