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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AK3 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
206.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
153.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
133.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
124.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
118.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
115.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
113.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
111.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
98.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
97.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
86.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
86.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
85.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
83.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
82.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
79.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
78.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
77.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
74.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
73.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
73.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
72.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
72.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
72.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
71.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
70.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
69.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
69.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
68.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
68.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
67.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
67.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
66.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
66.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
66.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
66.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
65.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
63.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
63.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
62.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
61.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
61.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
60.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
60.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
59.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
59.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
58.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
58.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
57.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
57.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
57.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
57.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
56.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
56.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
55.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
55.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
54.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
54.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
54.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
53.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
52.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
52.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
51.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
51.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
51.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
50.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
49.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
49.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
49.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
48.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
48.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
47.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
47.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
47.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
47.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
47.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
47.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
47.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
46.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
46.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
46.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
46.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
45.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
45.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
44.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
44.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
43.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
43.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
43.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
43.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
43.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
42.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
42.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
42.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
42.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
42.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
41.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
41.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
41.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
41.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
40.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
40.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
40.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
40.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
40.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
39.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
39.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
39.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
39.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
39.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
38.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
38.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
38.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
38.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
38.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
38.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
37.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
37.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
37.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
37.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
37.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
37.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
37.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
36.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
36.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
36.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
36.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
36.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
36.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
35.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
35.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
35.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
35.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
35.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
34.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
34.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
34.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
34.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
34.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
34.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
34.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
34.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
33.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
33.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
33.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
33.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
33.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
33.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
32.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
32.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
32.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
32.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
31.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
31.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
31.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
31.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
31.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
31.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
31.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
30.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
30.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
30.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
30.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
30.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
30.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
30.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
30.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
30.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
30.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
29.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
29.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
29.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
29.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
29.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
29.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
29.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
29.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
29.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
29.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
29.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
29.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
29.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
29.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
29.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
28.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
28.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
28.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
28.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
28.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
28.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
28.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
28.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
28.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
27.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
27.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
27.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
27.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
27.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
27.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
27.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
27.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
27.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
27.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
27.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
27.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
26.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
26.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
26.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
26.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
26.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
26.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
25.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
25.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
25.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
25.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
25.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
25.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
25.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
25.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
25.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
25.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
24.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
24.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
24.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
24.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
24.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
24.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
24.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
24.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
24.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
23.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
23.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
23.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
23.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
23.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
23.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
23.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
23.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
22.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
22.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
21.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
20.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
20.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
20.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
20.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
20.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
20.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
20.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
20.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
20.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
20.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
20.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
20.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
20.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
19.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
19.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
19.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
19.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
19.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
19.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
19.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
19.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
19.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
19.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
18.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
18.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
18.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
18.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
18.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
18.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
18.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
17.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
17.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
17.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
17.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
17.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
17.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
17.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
17.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
17.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
17.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
16.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
16.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
16.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
16.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
16.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
16.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
16.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
16.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
16.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
16.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
15.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
15.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
15.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
15.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
14.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
14.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
14.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
14.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
14.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
14.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
14.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
14.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
14.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
14.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
14.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
14.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
13.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
13.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
13.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
12.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
12.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
12.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
12.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
12.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
12.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
12.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
11.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
11.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
11.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
11.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
11.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
11.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
11.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
10.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
10.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
10.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
10.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
10.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
10.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
10.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
10.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
9.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
9.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
9.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
9.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
9.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
9.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
9.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
9.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
9.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
9.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
9.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
8.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
8.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
8.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
8.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
8.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
8.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
7.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
7.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
6.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
6.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
6.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
4.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
4.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AK3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.8
Number of samples
231
Samples
Sample
Description
TPM
DO45175
0 years, male, NA, stage:2, alive, 1140 days
98.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
88.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
82.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
77.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
71.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
69.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
64.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
64.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
58.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
57.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
57.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
57.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
56.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
54.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
54.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
54.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
53.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
52.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
52.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
52.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
52.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
51.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
51.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
51.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
50.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
50.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
50.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
49.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
49.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
48.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
48.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
48.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
47.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
47.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
47.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
47.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
46.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
46.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
46.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
45.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
45.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
45.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
45.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
45.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
45.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
44.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
44.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
43.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
43.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
43.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
42.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
42.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
42.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
42.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
41.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
40.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
39.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
39.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
39.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
39.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
39.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
38.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
38.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
38.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
38.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
38.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
37.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
37.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
37.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
37.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
37.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
37.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
36.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
36.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
36.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
36.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
36.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
36.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
36.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
35.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
35.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
35.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
35.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
35.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
34.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
34.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
34.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
33.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
33.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
33.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
33.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
33.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
33.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
33.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
33.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
32.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
32.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
32.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
32.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
32.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
32.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
32.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
31.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
31.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
31.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
31.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
31.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
31.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
31.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
31.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
31.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
30.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
30.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
30.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
30.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
30.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
30.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
30.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
30.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
30.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
29.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
29.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
29.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
29.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
29.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
29.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
29.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
29.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
29.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
29.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
29.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
29.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
29.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
28.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
28.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
28.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
28.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
28.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
28.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
28.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
28.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
28.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
28.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
27.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
27.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
27.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
27.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
26.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
26.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
26.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
26.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
26.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
25.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
25.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
25.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
25.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
25.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
25.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
25.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
24.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
24.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
24.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
24.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
24.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
23.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
23.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
23.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
23.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
23.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
23.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
23.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
23.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
23.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
23.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
22.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
22.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
22.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
22.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
22.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
22.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
22.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
22.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
22.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
22.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
21.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
21.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
20.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
20.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
20.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
19.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
19.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
19.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
19.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
19.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
19.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
19.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
19.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
19.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
19.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
18.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
18.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
18.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
18.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
18.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
18.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
18.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
17.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
17.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
17.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
17.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
16.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
16.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
15.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
15.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
15.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
14.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
14.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
14.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
12.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
12.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
12.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
12.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
12.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
11.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
11.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
10.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
10.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
10.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
7.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
6.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
627
Tumor
2.0
365
Tumor
1.5
636
Normal
1.1
981
Tumor
1.0
615
Tumor
1.0
452
Normal
1.0
786
Normal
1.0
648
Normal
1.0
465
Tumor
1.0
462
Normal
0.9
172
Normal
0.8
944
Normal
0.8
664
Normal
0.8
628
Normal
0.8
867
Tumor
0.8
564
Normal
0.8
1015
Tumor
0.8
342
Normal
0.8
466
Normal
0.7
922
Normal
0.7
616
Normal
0.7
128
Normal
0.7
618
Normal
0.7
742
Normal
0.7
568
Normal
0.7
824
Normal
0.7
868
Normal
0.7
866
Normal
0.7
862
Normal
0.7
298
Normal
0.7
723
Tumor
0.7
1032
Normal
0.7
394
Normal
0.7
436
Normal
0.7
414
Normal
0.7
514
Normal
0.7
278
Normal
0.7
572
Normal
0.7
376
Normal
0.7
145
Tumor
0.7
464
Normal
0.6
534
Normal
0.6
428
Normal
0.6
446
Normal
0.6
816
Normal
0.6
162
Normal
0.6
332
Normal
0.6
714
Normal
0.6
818
Normal
0.6
132
Normal
0.6
344
Normal
0.6
258
Normal
0.6
746
Normal
0.6
882
Normal
0.6
356
Normal
0.6
186
Normal
0.6
756
Normal
0.6
912
Normal
0.6
924
Normal
0.6
858
Normal
0.6
745
Tumor
0.6
392
Normal
0.6
358
Normal
0.6
1046
Normal
0.6
388
Normal
0.6
864
Normal
0.6
196
Normal
0.6
314
Normal
0.6
468
Normal
0.6
738
Normal
0.6
926
Normal
0.6
488
Normal
0.5
698
Normal
0.5
914
Normal
0.5
666
Normal
0.5
352
Normal
0.5
911
Tumor
0.5
451
Tumor
0.5
546
Normal
0.5
432
Normal
0.5
111
Normal
0.5
424
Normal
0.5
484
Normal
0.5
136
Normal
0.5
232
Normal
0.5
964
Normal
0.5
686
Normal
0.5
1016
Normal
0.5
138
Normal
0.5
558
Normal
0.5
938
Normal
0.5
448
Normal
0.5
114
Normal
0.5
214
Normal
0.5
328
Normal
0.5
222
Normal
0.5
1026
Normal
0.5
728
Normal
0.5
528
Normal
0.4
968
Normal
0.4
716
Normal
0.4
982
Normal
0.4
954
Normal
0.4
574
Normal
0.4
148
Normal
0.4
366
Normal
0.4
218
Normal
0.4
955
Tumor
0.4
884
Normal
0.4
482
Normal
0.4
915
Tumor
0.4
722
Normal
0.4
422
Normal
0.4
1041
Tumor
0.4
777
Tumor
0.4
354
Normal
0.4
976
Normal
0.4
672
Normal
0.4
494
Normal
0.4
526
Normal
0.4
416
Normal
0.4
874
Normal
0.4
1028
Normal
0.4
396
Normal
0.4
137
Tumor
0.4
445
Tumor
0.4
286
Normal
0.4
124
Normal
0.4
361
Tumor
0.4
662
Normal
0.4
1044
Normal
0.3
142
Normal
0.3
412
Normal
0.3
1022
Normal
0.3
472
Normal
0.3
918
Normal
0.3
1014
Normal
0.3
434
Normal
0.3
778
Normal
0.3
423
Tumor
0.3
978
Normal
0.3
956
Normal
0.3
642
Normal
0.3
721
Tumor
0.3
984
Normal
0.3
227
Tumor
0.3
696
Normal
0.3
126
Normal
0.3
1027
Tumor
0.3
481
Tumor
0.3
744
Normal
0.3
852
Normal
0.3
188
Normal
0.3
362
Normal
0.2
456
Normal
0.2
878
Normal
0.2
958
Normal
0.2
538
Normal
0.2
518
Normal
0.2
873
Tumor
0.2
364
Normal
0.2
952
Normal
0.2
1031
Tumor
0.2
212
Normal
0.2
284
Normal
0.2
695
Tumor
0.2
1042
Normal
0.2
368
Normal
0.2
474
Normal
0.2
228
Normal
0.2
146
Normal
0.2
262
Normal
0.2
272
Normal
0.2
554
Normal
0.2
478
Normal
0.2
426
Normal
0.2
727
Tumor
0.2
113
Tumor
0.2
916
Normal
0.1
195
Tumor
0.1
257
Tumor
0.1
1025
Tumor
0.1
516
Normal
0.1
191
Tumor
0.1
357
Tumor
0.1
713
Tumor
0.1
384
Normal
0.1
353
Tumor
0.1
685
Tumor
0.1
524
Normal
0.1
861
Tumor
0.1
513
Tumor
0.1
386
Normal
0.0
224
Normal
0.0
297
Tumor
0.0
785
Tumor
0.0
553
Tumor
0.0
665
Tumor
0.0
312
Normal
0.0
515
Tumor
0.0
617
Tumor
0.0
192
Normal
0.0
966
Normal
0.0
641
Tumor
0.0
1043
Tumor
0.0
327
Tumor
0.0
268
Normal
-0.1
444
Normal
-0.1
477
Tumor
-0.1
953
Tumor
-0.1
463
Tumor
-0.1
363
Tumor
-0.1
913
Tumor
-0.1
471
Tumor
-0.1
851
Tumor
-0.1
823
Tumor
-0.1
1045
Tumor
-0.1
563
Tumor
-0.1
461
Tumor
-0.2
427
Tumor
-0.2
527
Tumor
-0.2
421
Tumor
-0.2
415
Tumor
-0.2
715
Tumor
-0.2
943
Tumor
-0.2
393
Tumor
-0.2
433
Tumor
-0.2
857
Tumor
-0.2
261
Tumor
-0.2
435
Tumor
-0.3
383
Tumor
-0.3
743
Tumor
-0.3
755
Tumor
-0.3
431
Tumor
-0.3
492
Normal
-0.3
498
Normal
-0.3
537
Tumor
-0.3
536
Normal
-0.3
925
Tumor
-0.3
863
Tumor
-0.3
217
Tumor
-0.3
473
Tumor
-0.3
411
Tumor
-0.4
483
Tumor
-0.4
187
Tumor
-0.4
127
Tumor
-0.4
557
Tumor
-0.4
112
Tumor
-0.4
443
Tumor
-0.4
937
Tumor
-0.4
865
Tumor
-0.4
573
Tumor
-0.4
271
Tumor
-0.4
141
Tumor
-0.5
135
Tumor
-0.5
881
Tumor
-0.5
817
Tumor
-0.5
741
Tumor
-0.5
523
Tumor
-0.5
487
Tumor
-0.5
963
Tumor
-0.5
635
Tumor
-0.5
267
Tumor
-0.5
533
Tumor
-0.5
221
Tumor
-0.6
341
Tumor
-0.6
455
Tumor
-0.6
223
Tumor
-0.6
213
Tumor
-0.6
571
Tumor
-0.6
277
Tumor
-0.6
814
Normal
-0.6
517
Tumor
-0.6
125
Tumor
-0.6
815
Tumor
-0.6
697
Tumor
-0.6
567
Tumor
-0.6
975
Tumor
-0.6
313
Tumor
-0.7
395
Tumor
-0.7
285
Tumor
-0.7
231
Tumor
-0.7
883
Tumor
-0.7
923
Tumor
-0.7
447
Tumor
-0.7
185
Tumor
-0.7
147
Tumor
-0.8
467
Tumor
-0.8
525
Tumor
-0.8
671
Tumor
-0.8
877
Tumor
-0.8
921
Tumor
-0.8
161
Tumor
-0.8
967
Tumor
-0.9
331
Tumor
-0.9
737
Tumor
-0.9
813
Tumor
-0.9
375
Tumor
-0.9
491
Tumor
-0.9
977
Tumor
-0.9
387
Tumor
-0.9
413
Tumor
-1.0
917
Tumor
-1.0
1021
Tumor
-1.1
957
Tumor
-1.1
131
Tumor
-1.1
385
Tumor
-1.1
663
Tumor
-1.1
647
Tumor
-1.1
724
Normal
-1.1
493
Tumor
-1.1
535
Tumor
-1.1
497
Tumor
-1.1
351
Tumor
-1.2
171
Tumor
-1.2
425
Tumor
-1.2
123
Tumor
-1.2
391
Tumor
-1.3
367
Tumor
-1.3
355
Tumor
-1.3
1013
Tumor
-1.3
965
Tumor
-1.4
545
Tumor
-1.4
951
Tumor
-1.4
343
Tumor
-1.5
311
Tumor
-1.6
983
Tumor
-1.7
211
Tumor
-1.8
661
Tumor
-2.0
283
Tumor
-2.1
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.