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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL7 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1422.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
6165.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
5806.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
5699.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
4816.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4688.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
4380.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
4186.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
4105.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
4052.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3972.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
3965.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
3830.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3784.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
3781.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
3564.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
3369.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3307.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
3209.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
3162.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3131.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
3109.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
3061.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
3052.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
3040.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
2987.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
2987.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2979.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2974.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
2970.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
2929.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
2873.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
2821.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
2812.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
2802.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2782.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2753.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
2692.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
2665.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
2612.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
2604.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
2599.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2493.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
2479.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
2468.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
2439.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2438.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
2396.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
2391.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
2352.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
2351.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
2350.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2345.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
2341.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
2316.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
2314.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
2297.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
2272.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
2228.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
2207.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
2205.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
2182.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
2179.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2162.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
2161.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
2150.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2149.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
2133.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
2107.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
2105.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
2105.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
2085.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
2085.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
2068.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2065.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
2053.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
2051.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
2030.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
2011.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
1993.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
1978.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1965.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1963.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1962.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1953.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
1933.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1932.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1922.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
1884.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1883.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
1868.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
1861.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
1852.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
1846.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
1842.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
1816.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1809.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
1782.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
1771.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
1756.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
1742.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1742.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1740.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1705.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1699.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
1698.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
1649.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1634.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1598.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
1596.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
1581.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
1566.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1563.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
1562.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1551.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
1502.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
1486.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
1472.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1470.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1465.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1452.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
1447.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1445.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
1443.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1432.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1429.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1428.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1424.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1416.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1396.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1390.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1384.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1383.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1368.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1365.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
1349.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
1342.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
1330.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
1322.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
1319.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1319.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1311.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1310.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1298.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1296.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1296.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
1295.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1291.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1290.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1290.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1286.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1283.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1270.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
1262.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1255.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
1254.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
1252.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1243.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1240.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
1233.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1233.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1229.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1229.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1209.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
1206.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1204.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
1203.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
1203.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
1199.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1196.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1195.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
1192.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1191.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1191.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
1187.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
1187.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1171.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1166.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
1165.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
1163.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
1161.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
1157.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1154.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1153.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
1145.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1140.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
1138.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1137.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1131.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1112.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
1109.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
1108.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
1097.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
1097.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
1096.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1092.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1088.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1087.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1084.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1083.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
1081.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
1075.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1072.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1072.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1068.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1068.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
1065.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
1065.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1060.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
1050.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
1042.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1041.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
1038.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
1037.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1034.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
1022.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
1013.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1013.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
992.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
972.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
971.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
971.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
967.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
951.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
948.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
931.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
931.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
927.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
919.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
918.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
912.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
912.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
910.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
903.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
903.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
899.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
897.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
896.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
892.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
892.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
890.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
882.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
873.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
870.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
865.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
862.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
862.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
852.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
851.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
845.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
844.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
843.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
843.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
840.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
823.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
822.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
821.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
810.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
809.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
803.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
801.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
801.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
801.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
800.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
799.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
798.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
798.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
793.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
793.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
785.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
782.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
779.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
778.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
778.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
776.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
774.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
771.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
763.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
754.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
754.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
752.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
739.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
725.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
718.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
713.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
704.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
704.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
701.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
693.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
692.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
685.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
680.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
679.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
678.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
675.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
674.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
668.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
666.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
663.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
662.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
661.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
654.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
648.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
646.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
640.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
625.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
619.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
615.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
614.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
607.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
605.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
603.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
600.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
593.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
591.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
581.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
580.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
578.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
575.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
556.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
556.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
549.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
545.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
544.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
542.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
526.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
524.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
524.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
523.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
522.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
520.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
512.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
510.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
500.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
499.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
487.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
487.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
478.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
477.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
475.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
475.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
467.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
462.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
462.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
457.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
457.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
447.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
447.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
446.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
445.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
444.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
441.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
439.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
428.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
422.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
413.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
401.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
401.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
360.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
345.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
339.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
297.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL7 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1420.4
Number of samples
231
Samples
Sample
Description
TPM
DO50785
0 years, male, NA, stage:4, dead, 90 days
9962.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
7775.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
6694.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
5546.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
4596.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
4547.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
4399.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
4195.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
3845.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
3806.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
3756.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
3671.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
3592.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
3509.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
3483.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
3451.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
3147.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
3099.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
3077.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
3045.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
3029.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
2918.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
2889.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
2826.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
2796.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
2712.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
2643.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
2604.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
2597.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
2571.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
2527.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
2520.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
2467.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
2453.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
2442.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
2420.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
2408.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
2379.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
2242.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
2214.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
2199.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
2128.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
2076.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
2069.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
2047.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
2009.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
2008.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
1980.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
1979.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
1964.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
1943.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
1898.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
1818.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
1805.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
1799.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
1783.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
1763.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
1729.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
1727.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
1709.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
1692.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
1684.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
1680.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
1677.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
1624.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
1612.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1563.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
1539.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
1534.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
1504.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
1498.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
1468.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
1463.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
1462.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
1441.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
1437.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
1374.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
1373.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
1371.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
1370.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
1349.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
1339.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
1335.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
1315.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
1315.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
1300.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
1294.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
1294.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
1289.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
1279.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
1274.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
1273.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
1262.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
1251.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
1247.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1239.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
1211.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
1191.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
1181.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
1171.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
1165.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
1153.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
1147.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
1127.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
1127.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
1124.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
1110.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
1099.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
1091.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
1071.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
1064.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
1061.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1047.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
1025.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
1019.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
1017.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
1015.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1013.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
1005.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
986.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
984.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
981.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
977.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
976.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
973.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
964.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
963.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
962.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
962.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
957.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
956.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
942.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
919.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
916.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
915.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
910.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
903.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
881.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
876.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
869.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
869.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
866.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
846.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
839.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
823.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
810.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
800.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
790.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
787.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
783.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
782.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
782.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
781.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
775.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
770.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
765.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
754.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
752.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
742.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
742.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
741.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
740.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
727.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
724.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
721.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
720.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
714.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
710.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
710.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
701.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
691.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
683.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
681.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
662.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
645.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
642.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
641.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
637.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
633.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
631.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
623.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
618.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
612.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
606.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
591.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
588.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
588.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
585.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
561.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
554.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
553.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
550.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
546.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
541.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
540.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
528.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
524.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
520.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
519.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
511.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
504.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
502.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
501.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
498.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
497.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
496.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
483.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
481.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
476.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
455.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
453.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
444.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
419.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
411.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
409.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
409.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
405.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
398.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
385.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
384.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
365.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
365.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
327.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
315.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
302.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
293.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
259.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
182.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
175.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
169.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
84.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
557
Tumor
0.7
537
Tumor
0.5
285
Tumor
0.4
113
Tumor
0.4
367
Tumor
0.4
567
Tumor
0.4
327
Tumor
0.4
223
Tumor
0.4
851
Tumor
0.3
1021
Tumor
0.3
467
Tumor
0.3
685
Tumor
0.3
131
Tumor
0.3
965
Tumor
0.3
135
Tumor
0.3
497
Tumor
0.3
661
Tumor
0.3
413
Tumor
0.3
815
Tumor
0.3
331
Tumor
0.3
545
Tumor
0.3
395
Tumor
0.3
443
Tumor
0.3
448
Normal
0.3
353
Tumor
0.3
267
Tumor
0.3
494
Normal
0.3
393
Tumor
0.2
1027
Tumor
0.2
136
Normal
0.2
983
Tumor
0.2
824
Normal
0.2
1032
Normal
0.2
636
Normal
0.2
232
Normal
0.2
1044
Normal
0.2
944
Normal
0.2
756
Normal
0.2
528
Normal
0.2
227
Tumor
0.2
387
Tumor
0.2
1014
Normal
0.2
858
Normal
0.2
955
Tumor
0.2
617
Tumor
0.2
488
Normal
0.2
466
Normal
0.2
1026
Normal
0.2
535
Tumor
0.2
852
Normal
0.2
376
Normal
0.2
484
Normal
0.2
358
Normal
0.2
1025
Tumor
0.2
421
Tumor
0.2
671
Tumor
0.2
342
Normal
0.2
214
Normal
0.2
195
Tumor
0.2
257
Tumor
0.2
427
Tumor
0.2
727
Tumor
0.2
926
Normal
0.2
493
Tumor
0.2
777
Tumor
0.2
922
Normal
0.2
523
Tumor
0.2
778
Normal
0.2
534
Normal
0.2
984
Normal
0.2
123
Tumor
0.2
738
Normal
0.2
937
Tumor
0.2
481
Tumor
0.2
755
Tumor
0.1
172
Normal
0.1
568
Normal
0.1
573
Tumor
0.1
124
Normal
0.1
951
Tumor
0.1
422
Normal
0.1
648
Normal
0.1
128
Normal
0.1
724
Normal
0.1
862
Normal
0.1
1022
Normal
0.1
112
Tumor
0.1
451
Tumor
0.1
912
Normal
0.1
864
Normal
0.1
344
Normal
0.1
865
Tumor
0.1
132
Normal
0.1
142
Normal
0.1
527
Tumor
0.1
114
Normal
0.1
356
Normal
0.1
231
Tumor
0.1
145
Tumor
0.1
938
Normal
0.1
431
Tumor
0.1
818
Normal
0.1
111
Normal
0.1
187
Tumor
0.1
721
Tumor
0.1
981
Tumor
0.1
1042
Normal
0.1
964
Normal
0.1
558
Normal
0.1
697
Tumor
0.1
723
Tumor
0.1
483
Tumor
0.1
262
Normal
0.1
385
Tumor
0.1
525
Tumor
0.1
745
Tumor
0.1
746
Normal
0.1
258
Normal
0.1
868
Normal
0.1
866
Normal
0.1
952
Normal
0.1
817
Tumor
0.1
515
Tumor
0.1
628
Normal
0.1
1031
Tumor
0.1
286
Normal
0.1
426
Normal
0.1
785
Tumor
0.1
1016
Normal
0.1
352
Normal
0.1
662
Normal
0.1
533
Tumor
0.1
514
Normal
0.1
138
Normal
0.1
743
Tumor
0.1
392
Normal
0.1
137
Tumor
0.1
1046
Normal
0.1
728
Normal
0.1
462
Normal
0.1
967
Tumor
0.1
414
Normal
0.1
186
Normal
0.1
572
Normal
0.1
918
Normal
0.1
268
Normal
0.1
221
Tumor
0.1
272
Normal
0.1
517
Tumor
0.1
455
Tumor
0.1
696
Normal
0.1
375
Tumor
0.1
162
Normal
0.1
351
Tumor
0.1
171
Tumor
0.1
433
Tumor
0.1
664
Normal
0.1
228
Normal
0.1
1028
Normal
0.1
873
Tumor
0.1
857
Tumor
0.1
452
Normal
0.1
492
Normal
0.1
968
Normal
0.1
616
Normal
0.1
298
Normal
0.1
966
Normal
0.1
518
Normal
0.1
953
Tumor
0.1
213
Tumor
0.1
564
Normal
0.1
618
Normal
0.1
526
Normal
0.1
571
Tumor
0.1
434
Normal
0.1
686
Normal
0.1
362
Normal
0.1
436
Normal
0.1
957
Tumor
0.1
698
Normal
0.1
127
Tumor
0.1
1043
Tumor
0.1
665
Tumor
0.1
546
Normal
0.1
423
Tumor
0.1
882
Normal
0.1
465
Tumor
0.1
212
Normal
0.1
742
Normal
0.1
714
Normal
0.0
218
Normal
0.0
786
Normal
0.0
425
Tumor
0.0
446
Normal
0.0
126
Normal
0.0
958
Normal
0.0
148
Normal
0.0
916
Normal
0.0
816
Normal
0.0
196
Normal
0.0
554
Normal
0.0
147
Tumor
0.0
271
Tumor
0.0
191
Tumor
0.0
647
Tumor
0.0
284
Normal
0.0
923
Tumor
0.0
672
Normal
0.0
357
Tumor
0.0
982
Normal
0.0
332
Normal
0.0
1015
Tumor
0.0
978
Normal
0.0
355
Tumor
0.0
878
Normal
0.0
713
Tumor
0.0
663
Tumor
0.0
412
Normal
0.0
737
Tumor
0.0
1041
Tumor
0.0
314
Normal
0.0
185
Tumor
0.0
954
Normal
0.0
411
Tumor
0.0
524
Normal
0.0
161
Tumor
0.0
536
Normal
0.0
715
Tumor
0.0
277
Tumor
0.0
666
Normal
0.0
635
Tumor
0.0
553
Tumor
0.0
956
Normal
0.0
722
Normal
0.0
482
Normal
0.0
261
Tumor
0.0
432
Normal
0.0
976
Normal
0.0
468
Normal
0.0
642
Normal
0.0
224
Normal
0.0
447
Tumor
0.0
924
Normal
0.0
516
Normal
0.0
471
Tumor
0.0
424
Normal
0.0
188
Normal
0.0
341
Tumor
0.0
222
Normal
0.0
913
Tumor
0.0
394
Normal
0.0
563
Tumor
0.0
487
Tumor
0.0
354
Normal
0.0
146
Normal
0.0
363
Tumor
0.0
474
Normal
0.0
384
Normal
0.0
435
Tumor
0.0
416
Normal
0.0
574
Normal
0.0
513
Tumor
0.0
464
Normal
0.0
641
Tumor
0.0
217
Tumor
0.0
823
Tumor
0.0
445
Tumor
0.0
343
Tumor
0.0
278
Normal
-0.1
975
Tumor
-0.1
388
Normal
-0.1
463
Tumor
-0.1
716
Normal
-0.1
364
Normal
-0.1
368
Normal
-0.1
328
Normal
-0.1
366
Normal
-0.1
428
Normal
-0.1
472
Normal
-0.1
615
Tumor
-0.1
538
Normal
-0.1
141
Tumor
-0.1
461
Tumor
-0.1
861
Tumor
-0.1
881
Tumor
-0.1
456
Normal
-0.1
874
Normal
-0.1
386
Normal
-0.1
877
Tumor
-0.1
943
Tumor
-0.1
925
Tumor
-0.1
125
Tumor
-0.1
415
Tumor
-0.1
365
Tumor
-0.1
883
Tumor
-0.1
312
Normal
-0.1
921
Tumor
-0.1
917
Tumor
-0.1
396
Normal
-0.1
814
Normal
-0.1
283
Tumor
-0.1
963
Tumor
-0.1
744
Normal
-0.1
867
Tumor
-0.1
498
Normal
-0.1
297
Tumor
-0.1
884
Normal
-0.1
211
Tumor
-0.1
915
Tumor
-0.1
391
Tumor
-0.1
914
Normal
-0.1
444
Normal
-0.1
361
Tumor
-0.1
977
Tumor
-0.1
863
Tumor
-0.1
478
Normal
-0.2
813
Tumor
-0.2
477
Tumor
-0.2
313
Tumor
-0.2
695
Tumor
-0.2
491
Tumor
-0.2
1045
Tumor
-0.2
473
Tumor
-0.2
192
Normal
-0.2
311
Tumor
-0.2
741
Tumor
-0.2
1013
Tumor
-0.2
383
Tumor
-0.3
627
Tumor
-0.3
911
Tumor
-0.3
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.