We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MRPS28 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
76.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
235.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
192.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
187.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
183.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
177.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
176.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
160.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
158.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
157.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
156.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
156.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
156.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
156.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
155.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
149.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
148.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
147.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
147.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
146.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
138.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
135.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
135.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
133.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
133.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
132.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
128.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
128.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
127.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
126.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
126.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
125.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
124.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
124.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
124.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
124.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
124.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
123.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
121.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
120.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
120.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
119.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
117.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
116.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
114.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
113.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
113.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
113.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
113.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
112.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
112.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
111.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
110.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
110.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
109.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
109.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
109.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
109.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
108.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
107.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
107.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
106.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
105.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
105.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
105.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
104.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
103.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
103.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
102.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
102.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
101.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
101.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
101.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
100.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
99.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
99.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
98.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
98.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
98.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
96.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
95.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
95.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
95.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
95.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
95.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
95.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
94.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
93.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
92.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
92.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
91.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
91.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
90.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
90.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
90.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
89.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
89.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
89.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
89.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
89.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
88.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
88.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
88.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
88.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
88.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
86.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
85.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
85.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
85.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
85.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
85.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
84.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
84.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
84.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
84.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
84.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
84.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
84.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
83.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
83.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
83.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
83.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
83.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
83.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
82.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
82.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
82.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
81.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
81.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
81.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
80.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
80.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
80.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
79.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
79.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
79.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
79.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
79.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
78.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
78.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
78.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
77.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
77.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
77.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
77.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
76.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
76.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
76.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
76.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
76.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
75.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
75.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
75.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
75.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
74.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
74.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
74.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
74.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
73.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
73.2
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
73.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
73.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
72.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
72.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
72.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
72.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
71.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
71.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
71.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
71.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
71.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
71.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
70.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
70.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
70.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
70.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
70.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
70.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
70.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
70.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
69.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
69.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
69.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
69.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
69.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
68.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
68.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
68.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
68.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
68.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
68.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
67.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
67.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
67.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
67.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
66.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
66.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
66.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
66.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
66.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
65.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
65.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
65.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
65.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
65.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
64.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
64.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
63.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
63.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
63.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
62.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
62.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
62.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
62.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
62.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
61.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
61.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
61.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
60.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
60.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
60.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
60.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
60.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
60.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
59.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
59.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
59.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
59.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
59.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
58.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
58.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
58.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
58.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
58.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
58.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
58.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
57.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
57.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
57.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
57.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
57.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
57.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
57.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
56.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
56.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
56.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
56.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
56.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
56.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
56.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
56.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
56.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
55.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
55.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
55.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
55.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
55.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
55.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
55.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
54.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
54.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
54.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
54.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
54.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
54.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
54.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
54.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
54.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
53.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
53.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
53.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
53.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
53.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
52.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
52.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
52.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
52.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
51.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
51.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
51.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
51.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
50.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
50.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
50.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
50.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
50.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
49.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
49.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
49.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
49.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
49.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
49.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
49.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
49.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
49.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
48.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
48.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
48.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
48.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
47.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
47.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
47.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
47.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
47.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
47.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
46.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
46.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
46.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
46.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
46.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
45.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
45.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
45.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
45.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
44.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
44.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
44.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
44.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
44.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
43.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
43.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
43.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
43.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
42.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
41.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
41.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
41.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
41.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
40.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
40.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
40.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
40.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
40.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
40.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
40.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
39.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
39.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
39.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
39.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
39.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
38.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
37.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
37.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
37.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
37.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
36.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
36.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
35.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
35.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
35.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
33.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
33.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
32.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
32.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
32.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
32.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
31.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
31.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
29.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
29.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
26.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
14.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MRPS28 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.0
Number of samples
231
Samples
Sample
Description
TPM
DO48672
0 years, male, NA, stage:2, alive, 450 days
160.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
140.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
134.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
134.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
132.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
132.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
124.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
117.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
115.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
114.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
113.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
108.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
103.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
96.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
95.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
95.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
93.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
93.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
93.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
92.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
90.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
90.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
88.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
87.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
85.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
84.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
81.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
81.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
78.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
77.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
76.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
75.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
70.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
69.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
68.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
67.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
67.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
66.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
66.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
65.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
65.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
64.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
63.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
62.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
61.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
61.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
61.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
60.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
60.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
60.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
59.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
58.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
57.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
57.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
56.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
56.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
56.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
56.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
55.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
55.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
55.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
55.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
55.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
55.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
54.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
53.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
53.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
52.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
52.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
51.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
51.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
51.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
51.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
51.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
50.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
50.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
50.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
50.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
50.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
50.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
49.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
49.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
48.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
48.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
48.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
48.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
47.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
47.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
46.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
46.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
46.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
45.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
45.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
45.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
44.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
44.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
44.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
44.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
43.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
43.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
43.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
43.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
43.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
42.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
42.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
42.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
42.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
42.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
42.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
42.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
41.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
41.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
41.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
41.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
41.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
40.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
40.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
40.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
40.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
40.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
40.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
40.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
40.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
39.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
39.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
39.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
39.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
39.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
39.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
38.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
38.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
38.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
37.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
37.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
37.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
36.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
36.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
36.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
36.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
36.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
36.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
36.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
36.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
36.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
36.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
36.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
35.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
35.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
34.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
34.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
34.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
34.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
34.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
34.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
34.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
34.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
33.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
33.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
33.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
33.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
33.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
33.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
33.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
33.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
31.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
31.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
31.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
31.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
30.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
30.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
30.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
30.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
30.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
30.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
30.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
29.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
29.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
29.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
29.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
28.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
28.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
28.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
28.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
27.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
27.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
27.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
27.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
27.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
27.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
26.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
26.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
26.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
26.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
26.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
26.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
26.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
26.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
26.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
25.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
25.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
25.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
25.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
25.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
24.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
24.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
24.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
24.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
24.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
23.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
23.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
23.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
22.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
22.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
22.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
22.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
22.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
21.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
21.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
20.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
20.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
19.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
19.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
18.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
17.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
16.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
14.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
13.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
11.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
11.1
DO23532
0 years, female, NA, stage:1, alive, 960 days
11.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
10.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
473
Tumor
1.5
1041
Tumor
1.5
411
Tumor
1.5
865
Tumor
1.4
557
Tumor
1.4
967
Tumor
1.3
435
Tumor
1.2
231
Tumor
1.2
537
Tumor
1.2
957
Tumor
1.1
267
Tumor
1.0
571
Tumor
1.0
533
Tumor
1.0
1013
Tumor
1.0
525
Tumor
0.9
965
Tumor
0.9
227
Tumor
0.9
741
Tumor
0.8
663
Tumor
0.8
951
Tumor
0.8
361
Tumor
0.8
685
Tumor
0.8
423
Tumor
0.8
713
Tumor
0.8
477
Tumor
0.8
367
Tumor
0.7
1025
Tumor
0.7
427
Tumor
0.7
937
Tumor
0.7
363
Tumor
0.7
553
Tumor
0.7
1021
Tumor
0.7
861
Tumor
0.7
313
Tumor
0.7
823
Tumor
0.7
981
Tumor
0.6
715
Tumor
0.6
355
Tumor
0.6
665
Tumor
0.6
123
Tumor
0.6
635
Tumor
0.6
257
Tumor
0.6
915
Tumor
0.6
743
Tumor
0.6
567
Tumor
0.5
641
Tumor
0.5
913
Tumor
0.5
695
Tumor
0.5
497
Tumor
0.5
953
Tumor
0.5
353
Tumor
0.5
745
Tumor
0.5
171
Tumor
0.5
327
Tumor
0.5
357
Tumor
0.5
127
Tumor
0.5
883
Tumor
0.5
483
Tumor
0.5
351
Tumor
0.5
465
Tumor
0.5
983
Tumor
0.5
1031
Tumor
0.4
223
Tumor
0.4
697
Tumor
0.4
867
Tumor
0.4
671
Tumor
0.4
724
Normal
0.4
755
Tumor
0.4
963
Tumor
0.4
467
Tumor
0.4
573
Tumor
0.4
413
Tumor
0.3
221
Tumor
0.3
661
Tumor
0.3
195
Tumor
0.3
471
Tumor
0.3
617
Tumor
0.3
147
Tumor
0.3
851
Tumor
0.3
925
Tumor
0.3
977
Tumor
0.3
491
Tumor
0.3
271
Tumor
0.3
112
Tumor
0.3
535
Tumor
0.3
393
Tumor
0.3
185
Tumor
0.3
387
Tumor
0.3
395
Tumor
0.2
493
Tumor
0.2
145
Tumor
0.2
277
Tumor
0.2
911
Tumor
0.2
923
Tumor
0.2
131
Tumor
0.2
187
Tumor
0.2
721
Tumor
0.2
881
Tumor
0.2
463
Tumor
0.2
365
Tumor
0.1
341
Tumor
0.1
135
Tumor
0.1
1043
Tumor
0.1
433
Tumor
0.1
647
Tumor
0.1
431
Tumor
0.1
213
Tumor
0.1
523
Tumor
0.1
877
Tumor
0.1
513
Tumor
0.1
727
Tumor
0.1
375
Tumor
0.1
391
Tumor
0.1
517
Tumor
0.1
285
Tumor
0.1
261
Tumor
0.1
815
Tumor
0.1
728
Normal
0.1
385
Tumor
0.1
191
Tumor
0.0
615
Tumor
0.0
113
Tumor
0.0
817
Tumor
0.0
331
Tumor
0.0
487
Tumor
0.0
926
Normal
0.0
527
Tumor
0.0
514
Normal
0.0
474
Normal
0.0
451
Tumor
0.0
978
Normal
0.0
723
Tumor
-0.1
785
Tumor
-0.1
642
Normal
-0.1
1032
Normal
-0.1
114
Normal
-0.1
572
Normal
-0.1
964
Normal
-0.1
1042
Normal
-0.1
912
Normal
-0.1
982
Normal
-0.1
126
Normal
-0.1
616
Normal
-0.1
696
Normal
-0.1
311
Tumor
-0.1
481
Tumor
-0.1
564
Normal
-0.1
777
Tumor
-0.1
528
Normal
-0.1
297
Tumor
-0.1
554
Normal
-0.1
1022
Normal
-0.1
873
Tumor
-0.1
356
Normal
-0.1
944
Normal
-0.1
916
Normal
-0.1
272
Normal
-0.1
975
Tumor
-0.1
824
Normal
-0.1
1014
Normal
-0.1
383
Tumor
-0.1
482
Normal
-0.1
958
Normal
-0.1
472
Normal
-0.1
128
Normal
-0.1
416
Normal
-0.1
484
Normal
-0.2
722
Normal
-0.2
132
Normal
-0.2
466
Normal
-0.2
857
Tumor
-0.2
211
Tumor
-0.2
952
Normal
-0.2
1028
Normal
-0.2
534
Normal
-0.2
868
Normal
-0.2
878
Normal
-0.2
312
Normal
-0.2
212
Normal
-0.2
278
Normal
-0.2
432
Normal
-0.2
328
Normal
-0.2
448
Normal
-0.2
545
Tumor
-0.2
196
Normal
-0.2
714
Normal
-0.2
526
Normal
-0.2
364
Normal
-0.2
858
Normal
-0.2
447
Tumor
-0.2
738
Normal
-0.2
161
Tumor
-0.2
955
Tumor
-0.2
1026
Normal
-0.2
816
Normal
-0.2
446
Normal
-0.2
412
Normal
-0.2
756
Normal
-0.2
284
Normal
-0.2
516
Normal
-0.2
648
Normal
-0.2
136
Normal
-0.2
258
Normal
-0.3
518
Normal
-0.3
462
Normal
-0.3
914
Normal
-0.3
662
Normal
-0.3
436
Normal
-0.3
864
Normal
-0.3
943
Tumor
-0.3
664
Normal
-0.3
716
Normal
-0.3
742
Normal
-0.3
882
Normal
-0.3
546
Normal
-0.3
141
Tumor
-0.3
188
Normal
-0.3
461
Tumor
-0.3
148
Normal
-0.3
222
Normal
-0.3
388
Normal
-0.3
866
Normal
-0.3
214
Normal
-0.3
1045
Tumor
-0.3
444
Normal
-0.3
232
Normal
-0.3
568
Normal
-0.3
228
Normal
-0.3
111
Normal
-0.3
628
Normal
-0.3
478
Normal
-0.3
558
Normal
-0.3
686
Normal
-0.3
146
Normal
-0.3
786
Normal
-0.3
125
Tumor
-0.3
428
Normal
-0.3
666
Normal
-0.3
956
Normal
-0.3
924
Normal
-0.3
456
Normal
-0.3
618
Normal
-0.3
366
Normal
-0.3
1016
Normal
-0.3
778
Normal
-0.3
563
Tumor
-0.3
954
Normal
-0.4
268
Normal
-0.4
464
Normal
-0.4
862
Normal
-0.4
396
Normal
-0.4
746
Normal
-0.4
424
Normal
-0.4
494
Normal
-0.4
922
Normal
-0.4
362
Normal
-0.4
425
Tumor
-0.4
574
Normal
-0.4
1046
Normal
-0.4
358
Normal
-0.4
1044
Normal
-0.4
968
Normal
-0.4
884
Normal
-0.4
698
Normal
-0.4
918
Normal
-0.4
1015
Tumor
-0.4
314
Normal
-0.4
966
Normal
-0.4
434
Normal
-0.4
298
Normal
-0.4
137
Tumor
-0.4
852
Normal
-0.4
217
Tumor
-0.4
142
Normal
-0.4
421
Tumor
-0.4
443
Tumor
-0.4
636
Normal
-0.4
737
Tumor
-0.4
172
Normal
-0.4
415
Tumor
-0.5
162
Normal
-0.5
938
Normal
-0.5
524
Normal
-0.5
445
Tumor
-0.5
488
Normal
-0.5
976
Normal
-0.5
262
Normal
-0.5
386
Normal
-0.5
138
Normal
-0.5
627
Tumor
-0.5
124
Normal
-0.5
536
Normal
-0.5
818
Normal
-0.5
455
Tumor
-0.5
426
Normal
-0.5
283
Tumor
-0.5
814
Normal
-0.5
422
Normal
-0.5
376
Normal
-0.5
874
Normal
-0.5
468
Normal
-0.5
224
Normal
-0.5
984
Normal
-0.5
192
Normal
-0.5
352
Normal
-0.6
286
Normal
-0.6
218
Normal
-0.6
538
Normal
-0.6
498
Normal
-0.6
813
Tumor
-0.6
392
Normal
-0.6
452
Normal
-0.6
368
Normal
-0.6
384
Normal
-0.6
414
Normal
-0.6
394
Normal
-0.6
672
Normal
-0.6
515
Tumor
-0.7
186
Normal
-0.7
343
Tumor
-0.7
492
Normal
-0.7
354
Normal
-0.7
917
Tumor
-0.7
344
Normal
-0.7
1027
Tumor
-0.7
332
Normal
-0.8
342
Normal
-0.8
863
Tumor
-1.0
921
Tumor
-1.1
744
Normal
-1.1
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
