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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GOLGA7 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
60.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
60.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
59.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
57.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
56.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
52.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
48.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
48.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
46.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
44.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
44.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
44.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
42.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
42.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
42.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
41.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
41.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
40.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
40.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
40.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
40.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
39.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
39.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
38.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
38.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
37.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
37.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
36.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
36.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
36.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
35.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
35.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
35.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
35.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
35.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
34.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
34.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
34.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
34.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
34.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
33.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
33.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
32.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
32.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
31.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
31.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
31.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
31.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
31.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
31.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
31.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
31.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
31.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
31.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
30.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
30.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
30.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
30.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
30.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
29.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
29.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
29.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
29.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
29.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
28.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
28.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
28.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
28.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
28.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
28.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
27.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
27.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
27.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
27.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
27.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
27.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
27.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
26.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
26.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
26.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
26.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
26.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
26.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
26.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
26.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
26.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
26.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
26.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
25.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
25.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
25.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
25.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
25.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
25.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
25.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
25.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
25.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
25.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
25.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
24.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
24.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
24.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
24.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
24.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
24.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
23.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
23.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
23.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
23.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
23.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
23.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
22.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
22.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
22.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
22.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
22.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
22.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
22.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
22.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
22.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
22.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
22.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
22.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
21.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
21.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
21.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
21.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
21.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
21.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
21.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
21.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
21.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
21.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
21.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
21.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
20.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
20.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
20.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
20.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
20.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
20.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
20.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
20.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
20.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
20.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
20.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
20.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
20.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
20.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
20.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
20.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
19.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
19.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
19.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
19.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
19.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
19.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
19.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
19.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
19.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
19.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
19.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
19.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
19.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
18.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
18.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
18.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
18.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
18.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
18.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
18.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
18.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
17.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
17.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
17.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
17.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
17.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
17.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
17.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
17.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
17.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
17.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
17.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
17.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
17.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
16.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
16.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
16.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
16.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
16.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
16.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
16.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
16.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
16.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
16.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
16.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
16.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
16.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
16.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
15.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
15.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
15.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
15.8
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
15.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
15.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
15.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
15.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
15.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
15.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
15.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
15.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
15.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
14.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
14.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
14.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
14.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
14.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
14.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
14.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
14.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
14.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
14.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
14.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
14.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
14.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
14.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
13.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
13.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
13.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
13.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
13.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
13.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
13.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
13.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
13.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
13.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
13.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
13.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
13.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
13.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
13.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
13.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
12.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
12.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
12.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
12.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
12.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
12.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
12.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
12.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
12.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
12.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
12.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
12.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
12.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
12.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
12.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
12.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
12.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
12.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
12.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
12.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
12.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
12.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
11.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
11.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
11.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
11.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
11.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
11.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
11.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
11.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
11.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
11.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
11.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
11.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
11.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
11.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
11.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
10.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
10.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
10.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
10.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
10.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
10.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
10.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
10.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
10.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
10.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
10.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
10.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
10.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
10.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
10.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
10.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
10.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
10.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
10.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
10.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
10.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
10.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
10.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
9.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
9.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
9.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
9.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
9.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
9.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
9.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
9.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
9.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
9.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
9.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
9.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
9.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
8.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
8.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
8.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
8.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
8.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
8.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
8.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
8.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
8.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
8.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
8.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
8.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
7.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
7.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
7.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
7.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
7.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
7.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
7.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
7.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
7.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
6.9
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
6.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
6.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
6.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
6.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
5.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
5.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
5.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
5.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
4.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
4.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
4.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GOLGA7 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.4
Number of samples
231
Samples
Sample
Description
TPM
DO45247
0 years, female, NA, stage:2, alive, 210 days
64.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
53.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
49.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
47.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
46.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
44.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
44.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
44.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
43.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
43.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
40.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
39.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
38.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
38.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
38.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
38.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
38.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
37.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
36.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
35.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
35.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
35.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
35.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
34.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
34.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
34.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
33.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
33.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
33.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
33.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
33.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
32.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
32.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
31.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
30.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
30.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
30.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
30.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
30.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
30.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
29.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
29.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
29.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
28.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
28.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
28.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
28.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
28.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
28.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
28.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
28.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
27.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
27.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
27.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
27.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
27.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
26.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
26.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
26.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
26.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
26.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
26.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
26.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
25.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
25.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
25.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
24.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
24.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
24.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
24.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
24.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
24.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
23.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
23.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
23.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
23.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
23.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
23.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
23.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
23.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
23.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
23.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
23.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
22.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
22.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
22.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
22.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
22.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
22.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
22.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
21.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
21.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
21.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
21.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
21.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
21.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
21.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
21.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
21.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
21.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
21.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
21.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
20.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
20.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
20.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
20.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
20.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
20.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
20.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
20.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
20.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
20.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
19.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
19.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
19.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
19.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
19.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
19.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
19.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
19.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
19.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
19.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
18.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
18.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
18.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
18.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
18.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
18.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
18.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
18.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
18.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
18.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
18.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
17.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
17.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
17.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
17.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
17.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
17.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
17.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
16.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
16.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
16.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
16.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
16.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
16.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
16.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
16.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
16.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
16.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
16.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
16.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
15.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
15.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
15.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
15.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
15.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
15.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
15.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
15.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
15.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
15.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
15.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
15.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
15.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
15.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
15.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
15.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
14.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
14.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
14.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
14.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
14.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
14.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
14.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
14.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
14.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
14.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
14.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
14.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
13.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
13.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
13.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
13.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
13.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
13.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
13.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
13.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
13.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
13.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
13.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
12.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
12.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
12.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
12.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
12.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
12.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
12.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
12.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
11.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
11.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
11.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
11.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
11.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
11.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
10.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
10.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
10.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
10.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
10.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
10.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
10.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
10.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
10.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
10.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
10.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
10.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
10.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
9.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
9.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
9.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
9.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
9.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
8.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
8.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
8.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
8.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
8.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
7.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
7.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
425
Tumor
0.7
1025
Tumor
0.7
745
Tumor
0.6
1027
Tumor
0.5
777
Tumor
0.5
257
Tumor
0.5
471
Tumor
0.5
697
Tumor
0.5
573
Tumor
0.5
221
Tumor
0.5
361
Tumor
0.4
533
Tumor
0.4
363
Tumor
0.4
331
Tumor
0.4
527
Tumor
0.4
327
Tumor
0.4
817
Tumor
0.4
737
Tumor
0.4
223
Tumor
0.4
912
Normal
0.4
1026
Normal
0.3
515
Tumor
0.3
341
Tumor
0.3
365
Tumor
0.3
685
Tumor
0.3
1043
Tumor
0.3
368
Normal
0.3
517
Tumor
0.3
863
Tumor
0.3
387
Tumor
0.3
524
Normal
0.3
227
Tumor
0.3
1042
Normal
0.3
498
Normal
0.3
868
Normal
0.3
975
Tumor
0.3
728
Normal
0.3
277
Tumor
0.3
743
Tumor
0.3
553
Tumor
0.3
978
Normal
0.3
513
Tumor
0.3
147
Tumor
0.3
976
Normal
0.3
964
Normal
0.3
343
Tumor
0.3
755
Tumor
0.3
858
Normal
0.3
1046
Normal
0.3
491
Tumor
0.3
824
Normal
0.3
851
Tumor
0.3
984
Normal
0.3
884
Normal
0.3
523
Tumor
0.3
526
Normal
0.3
536
Normal
0.3
286
Normal
0.3
727
Tumor
0.3
738
Normal
0.2
925
Tumor
0.2
328
Normal
0.2
1045
Tumor
0.2
367
Tumor
0.2
514
Normal
0.2
1031
Tumor
0.2
982
Normal
0.2
473
Tumor
0.2
883
Tumor
0.2
497
Tumor
0.2
477
Tumor
0.2
366
Normal
0.2
383
Tumor
0.2
1014
Normal
0.2
1022
Normal
0.2
212
Normal
0.2
955
Tumor
0.2
918
Normal
0.2
415
Tumor
0.2
943
Tumor
0.2
778
Normal
0.2
313
Tumor
0.2
545
Tumor
0.2
916
Normal
0.2
1032
Normal
0.2
917
Tumor
0.2
535
Tumor
0.2
698
Normal
0.2
525
Tumor
0.2
742
Normal
0.2
432
Normal
0.2
713
Tumor
0.2
384
Normal
0.2
723
Tumor
0.2
375
Tumor
0.2
494
Normal
0.2
271
Tumor
0.2
921
Tumor
0.2
641
Tumor
0.2
615
Tumor
0.2
866
Normal
0.2
145
Tumor
0.2
627
Tumor
0.2
695
Tumor
0.2
412
Normal
0.2
926
Normal
0.2
362
Normal
0.2
696
Normal
0.2
977
Tumor
0.2
786
Normal
0.2
462
Normal
0.2
461
Tumor
0.2
448
Normal
0.2
877
Tumor
0.2
284
Normal
0.2
146
Normal
0.2
132
Normal
0.2
864
Normal
0.2
112
Tumor
0.2
493
Tumor
0.2
852
Normal
0.1
136
Normal
0.1
686
Normal
0.1
882
Normal
0.1
756
Normal
0.1
635
Tumor
0.1
411
Tumor
0.1
954
Normal
0.1
528
Normal
0.1
721
Tumor
0.1
744
Normal
0.1
192
Normal
0.1
722
Normal
0.1
447
Tumor
0.1
534
Normal
0.1
967
Tumor
0.1
518
Normal
0.1
714
Normal
0.1
463
Tumor
0.1
444
Normal
0.1
358
Normal
0.1
958
Normal
0.1
376
Normal
0.1
1044
Normal
0.1
258
Normal
0.1
944
Normal
0.1
878
Normal
0.1
125
Tumor
0.1
1028
Normal
0.1
311
Tumor
0.1
482
Normal
0.1
172
Normal
0.1
937
Tumor
0.1
142
Normal
0.1
492
Normal
0.1
131
Tumor
0.1
983
Tumor
0.1
956
Normal
0.1
474
Normal
0.1
957
Tumor
0.1
818
Normal
0.1
1013
Tumor
0.1
968
Normal
0.1
922
Normal
0.1
785
Tumor
0.1
224
Normal
0.1
516
Normal
0.1
488
Normal
0.1
874
Normal
0.1
228
Normal
0.1
913
Tumor
0.1
232
Normal
0.1
1021
Tumor
0.1
272
Normal
0.1
746
Normal
0.1
352
Normal
0.1
554
Normal
0.1
451
Tumor
0.1
648
Normal
0.1
456
Normal
0.1
391
Tumor
0.1
356
Normal
0.1
537
Tumor
0.1
278
Normal
0.1
297
Tumor
0.1
218
Normal
0.1
865
Tumor
0.1
416
Normal
0.1
966
Normal
0.1
191
Tumor
0.1
472
Normal
0.1
538
Normal
0.1
435
Tumor
0.1
355
Tumor
0.1
914
Normal
0.1
484
Normal
0.1
314
Normal
0.1
716
Normal
0.1
354
Normal
0.1
814
Normal
0.1
546
Normal
0.1
268
Normal
0.1
126
Normal
0.1
938
Normal
0.1
195
Tumor
0.1
213
Tumor
0.1
394
Normal
0.0
816
Normal
0.0
924
Normal
0.0
483
Tumor
0.0
478
Normal
0.0
952
Normal
0.0
1015
Tumor
0.0
364
Normal
0.0
564
Normal
0.0
487
Tumor
0.0
434
Normal
0.0
813
Tumor
0.0
617
Tumor
0.0
436
Normal
0.0
262
Normal
0.0
628
Normal
0.0
981
Tumor
0.0
672
Normal
0.0
135
Tumor
0.0
113
Tumor
0.0
951
Tumor
0.0
1016
Normal
0.0
127
Tumor
0.0
666
Normal
0.0
911
Tumor
0.0
161
Tumor
0.0
332
Normal
0.0
741
Tumor
0.0
464
Normal
0.0
162
Normal
0.0
427
Tumor
0.0
963
Tumor
0.0
823
Tumor
0.0
188
Normal
0.0
388
Normal
0.0
558
Normal
0.0
141
Tumor
0.0
616
Normal
0.0
392
Normal
0.0
222
Normal
0.0
465
Tumor
0.0
344
Normal
0.0
664
Normal
0.0
446
Normal
0.0
114
Normal
0.0
665
Tumor
0.0
421
Tumor
0.0
413
Tumor
0.0
867
Tumor
0.0
873
Tumor
0.0
923
Tumor
0.0
138
Normal
0.0
285
Tumor
0.0
396
Normal
0.0
862
Normal
0.0
217
Tumor
0.0
466
Normal
0.0
724
Normal
0.0
211
Tumor
0.0
467
Tumor
0.0
283
Tumor
0.0
298
Normal
0.0
953
Tumor
0.0
1041
Tumor
0.0
563
Tumor
0.0
187
Tumor
0.0
111
Normal
-0.1
428
Normal
-0.1
385
Tumor
-0.1
481
Tumor
-0.1
196
Normal
-0.1
148
Normal
-0.1
185
Tumor
-0.1
186
Normal
-0.1
342
Normal
-0.1
128
Normal
-0.1
455
Tumor
-0.1
452
Normal
-0.1
572
Normal
-0.1
426
Normal
-0.1
915
Tumor
-0.1
715
Tumor
-0.1
636
Normal
-0.1
386
Normal
-0.1
214
Normal
-0.1
443
Tumor
-0.1
618
Normal
-0.1
137
Tumor
-0.1
642
Normal
-0.1
414
Normal
-0.1
424
Normal
-0.1
574
Normal
-0.1
123
Tumor
-0.1
267
Tumor
-0.1
861
Tumor
-0.1
663
Tumor
-0.1
662
Normal
-0.1
433
Tumor
-0.1
395
Tumor
-0.1
567
Tumor
-0.1
171
Tumor
-0.1
857
Tumor
-0.2
881
Tumor
-0.2
353
Tumor
-0.2
393
Tumor
-0.2
422
Normal
-0.2
423
Tumor
-0.2
312
Normal
-0.2
468
Normal
-0.2
445
Tumor
-0.2
647
Tumor
-0.2
965
Tumor
-0.2
431
Tumor
-0.2
815
Tumor
-0.2
568
Normal
-0.2
124
Normal
-0.2
261
Tumor
-0.2
571
Tumor
-0.3
671
Tumor
-0.4
557
Tumor
-0.4
357
Tumor
-0.4
351
Tumor
-0.4
231
Tumor
-0.5
661
Tumor
-0.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.