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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNX12 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
110.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
64.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
62.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
61.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
60.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
59.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
50.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
49.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
48.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
45.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
45.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
44.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
43.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
43.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
42.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
42.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
41.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
41.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
41.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
39.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
38.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
37.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
35.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
35.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
34.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
34.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
34.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
33.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
33.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
32.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
32.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
32.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
32.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
31.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
31.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
30.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
30.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
29.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
29.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
29.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
29.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
29.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
29.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
28.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
28.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
28.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
28.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
28.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
28.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
27.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
27.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
27.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
27.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
27.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
27.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
27.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
26.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
26.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
26.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
26.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
26.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
26.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
26.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
25.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
25.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
25.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
25.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
24.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
24.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
24.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
24.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
24.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
24.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
24.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
23.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
23.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
23.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
23.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
23.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
23.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
23.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
23.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
23.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
23.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
23.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
22.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
22.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
22.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
22.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
22.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
22.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
22.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
22.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
22.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
22.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
21.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
21.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
21.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
21.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
21.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
21.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
21.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
21.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
21.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
20.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
20.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
20.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
20.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
20.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
20.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
20.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
20.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
20.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
20.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
20.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
20.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
20.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
20.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
20.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
19.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
19.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
19.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
19.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
19.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
19.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
19.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
19.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
19.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
19.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
19.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
19.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
19.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
19.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
19.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
19.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
19.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
19.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
19.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
18.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
18.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
18.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
18.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
18.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
18.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
18.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
18.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
18.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
18.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
18.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
17.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
17.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
17.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
17.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
17.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
17.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
17.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
17.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
17.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
17.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
17.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
17.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
17.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
16.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
16.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
16.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
16.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
16.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
16.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
16.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
16.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
16.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
16.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
16.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
16.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
16.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
16.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
16.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
16.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
16.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
16.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
16.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
16.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
16.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
16.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
16.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
15.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
15.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
15.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
15.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
15.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
15.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
15.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
15.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
15.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
15.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
15.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
15.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
15.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
15.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
15.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
15.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
15.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
15.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
15.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
15.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
15.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
15.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
15.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
15.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
15.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
15.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
14.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
14.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
14.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
14.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
14.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
14.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
14.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
14.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
14.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
14.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
14.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
13.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
13.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
13.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
13.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
13.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
13.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
13.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
13.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
13.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
13.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
13.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
13.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
13.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
13.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
13.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
13.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
13.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
13.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
13.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
13.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
12.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
12.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
12.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
12.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
12.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
12.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
12.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
12.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
12.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
12.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
12.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
12.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
12.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
12.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
12.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
12.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
11.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
11.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
11.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
11.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
11.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
11.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
11.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
11.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
11.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
11.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
11.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
11.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
11.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
11.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
11.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
11.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
11.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
10.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
10.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
10.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
10.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
10.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
10.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
10.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
10.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
10.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
10.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
10.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
10.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
10.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
10.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
10.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
10.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
10.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
9.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
9.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
9.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
9.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
9.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
9.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
9.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
9.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
9.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
9.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
9.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
9.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
9.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
8.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
8.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
8.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
8.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
8.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
8.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
8.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
8.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
8.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
8.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
8.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
8.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
8.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
8.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
7.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
7.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
7.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
7.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
7.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
6.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
6.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
6.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
6.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
6.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
5.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
5.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
5.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
5.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
4.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
4.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
3.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNX12 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.2
Number of samples
231
Samples
Sample
Description
TPM
DO45275
0 years, male, NA, stage:3, dead, 10 days
37.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
29.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
28.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
26.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
26.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
25.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
24.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
23.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
21.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
19.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
19.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
18.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
17.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
16.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
16.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
16.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
16.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
16.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
15.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
15.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
15.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
15.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
15.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
15.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
15.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
15.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
14.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
14.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
14.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
14.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
14.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
14.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
14.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
14.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
14.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
13.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
13.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
13.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
13.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
13.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
13.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
13.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
13.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
13.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
13.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
13.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
12.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
12.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
12.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
12.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
12.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
12.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
12.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
12.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
12.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
12.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
11.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
11.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
11.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
11.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
11.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
11.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
11.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
11.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
11.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
11.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
11.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
11.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
11.2
DO45111
0 years, male, NA, stage:2, alive, 1590 days
11.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
11.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
11.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
11.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
11.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
11.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
11.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
10.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
10.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
10.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
10.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
10.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
10.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
10.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
10.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
10.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
10.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
10.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
10.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
9.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
9.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
9.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
9.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
9.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
9.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
9.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
9.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
9.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
9.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
9.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
9.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
9.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
9.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
9.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
9.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
9.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
9.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
9.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
9.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
9.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
9.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
9.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
9.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
9.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
9.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
9.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
8.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
8.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
8.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
8.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
8.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
8.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
8.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
8.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
8.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
8.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
8.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
8.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
8.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
8.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
8.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
8.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
7.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
7.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
7.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
7.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
7.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
7.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
7.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
7.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
7.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
7.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
7.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
7.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
7.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
7.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
6.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
6.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
6.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
6.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
6.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
6.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
6.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
6.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
6.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
6.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
6.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
6.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
6.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
6.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
6.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
5.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
5.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
5.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
5.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
5.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
5.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
5.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
5.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
5.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
5.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
5.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
5.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
5.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
5.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
5.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
5.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
4.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
4.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
4.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
4.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
4.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
4.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
4.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
4.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
4.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
4.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
3.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
3.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
3.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
3.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
3.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
3.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
3.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
3.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
3.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
3.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
2.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
2.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
2.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
2.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
2.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
2.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
2.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
2.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
2.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
2.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
1.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
1.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
1.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
1.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
1.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
1.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
1.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
1.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
1.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
1.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
1.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
1.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
1.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
1.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
0.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
0.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
1013
Tumor
0.8
171
Tumor
0.7
785
Tumor
0.6
481
Tumor
0.6
1027
Tumor
0.6
965
Tumor
0.6
813
Tumor
0.5
147
Tumor
0.5
745
Tumor
0.5
231
Tumor
0.5
537
Tumor
0.5
483
Tumor
0.5
557
Tumor
0.5
851
Tumor
0.4
515
Tumor
0.4
685
Tumor
0.4
756
Normal
0.4
665
Tumor
0.4
393
Tumor
0.4
425
Tumor
0.4
493
Tumor
0.4
435
Tumor
0.4
455
Tumor
0.3
527
Tumor
0.3
567
Tumor
0.3
545
Tumor
0.3
917
Tumor
0.3
814
Normal
0.3
881
Tumor
0.3
958
Normal
0.3
882
Normal
0.3
135
Tumor
0.3
963
Tumor
0.3
727
Tumor
0.3
528
Normal
0.3
737
Tumor
0.3
533
Tumor
0.3
1021
Tumor
0.3
473
Tumor
0.2
516
Normal
0.2
343
Tumor
0.2
536
Normal
0.2
513
Tumor
0.2
975
Tumor
0.2
697
Tumor
0.2
884
Normal
0.2
964
Normal
0.2
1045
Tumor
0.2
514
Normal
0.2
487
Tumor
0.2
1042
Normal
0.2
627
Tumor
0.2
538
Normal
0.2
715
Tumor
0.2
471
Tumor
0.2
778
Normal
0.2
913
Tumor
0.2
1025
Tumor
0.2
951
Tumor
0.2
817
Tumor
0.2
124
Normal
0.2
492
Normal
0.2
498
Normal
0.2
478
Normal
0.2
968
Normal
0.2
466
Normal
0.2
916
Normal
0.2
786
Normal
0.2
824
Normal
0.2
444
Normal
0.2
283
Tumor
0.2
777
Tumor
0.2
212
Normal
0.2
661
Tumor
0.2
524
Normal
0.2
467
Tumor
0.1
525
Tumor
0.1
696
Normal
0.1
136
Normal
0.1
823
Tumor
0.1
953
Tumor
0.1
1046
Normal
0.1
864
Normal
0.1
126
Normal
0.1
518
Normal
0.1
185
Tumor
0.1
956
Normal
0.1
534
Normal
0.1
421
Tumor
0.1
966
Normal
0.1
852
Normal
0.1
472
Normal
0.1
494
Normal
0.1
311
Tumor
0.1
271
Tumor
0.1
1032
Normal
0.1
976
Normal
0.1
431
Tumor
0.1
866
Normal
0.1
563
Tumor
0.1
918
Normal
0.1
484
Normal
0.1
488
Normal
0.1
464
Normal
0.1
392
Normal
0.1
714
Normal
0.1
128
Normal
0.1
261
Tumor
0.1
982
Normal
0.1
664
Normal
0.1
698
Normal
0.1
912
Normal
0.1
224
Normal
0.1
447
Tumor
0.1
362
Normal
0.1
445
Tumor
0.1
1016
Normal
0.1
412
Normal
0.1
344
Normal
0.1
672
Normal
0.1
984
Normal
0.1
874
Normal
0.1
416
Normal
0.1
921
Tumor
0.1
954
Normal
0.1
1014
Normal
0.1
313
Tumor
0.1
187
Tumor
0.1
738
Normal
0.1
861
Tumor
0.1
728
Normal
0.1
952
Normal
0.1
196
Normal
0.1
284
Normal
0.1
268
Normal
0.1
944
Normal
0.1
383
Tumor
0.1
878
Normal
0.1
462
Normal
0.1
125
Tumor
0.1
546
Normal
0.1
662
Normal
0.1
686
Normal
0.1
922
Normal
0.1
162
Normal
0.1
385
Tumor
0.1
272
Normal
0.1
277
Tumor
0.1
356
Normal
0.1
815
Tumor
0.1
883
Tumor
0.1
138
Normal
0.1
456
Normal
0.1
553
Tumor
0.1
1044
Normal
0.1
298
Normal
0.1
391
Tumor
0.1
746
Normal
0.1
228
Normal
0.1
415
Tumor
0.1
615
Tumor
0.1
468
Normal
0.1
755
Tumor
0.1
432
Normal
0.1
526
Normal
0.1
375
Tumor
0.0
364
Normal
0.0
436
Normal
0.0
411
Tumor
0.0
395
Tumor
0.0
724
Normal
0.0
474
Normal
0.0
434
Normal
0.0
722
Normal
0.0
448
Normal
0.0
648
Normal
0.0
983
Tumor
0.0
554
Normal
0.0
286
Normal
0.0
616
Normal
0.0
978
Normal
0.0
148
Normal
0.0
188
Normal
0.0
424
Normal
0.0
1026
Normal
0.0
452
Normal
0.0
647
Tumor
0.0
628
Normal
0.0
816
Normal
0.0
413
Tumor
0.0
564
Normal
0.0
981
Tumor
0.0
366
Normal
0.0
666
Normal
0.0
558
Normal
0.0
858
Normal
0.0
955
Tumor
0.0
365
Tumor
0.0
926
Normal
0.0
914
Normal
0.0
394
Normal
0.0
491
Tumor
0.0
396
Normal
0.0
111
Normal
0.0
257
Tumor
0.0
192
Normal
0.0
868
Normal
0.0
617
Tumor
0.0
384
Normal
0.0
482
Normal
0.0
1028
Normal
0.0
433
Tumor
0.0
618
Normal
0.0
943
Tumor
0.0
414
Normal
0.0
376
Normal
0.0
716
Normal
0.0
223
Tumor
0.0
312
Normal
0.0
573
Tumor
0.0
523
Tumor
0.0
142
Normal
0.0
574
Normal
0.0
361
Tumor
0.0
863
Tumor
0.0
721
Tumor
0.0
422
Normal
0.0
222
Normal
0.0
146
Normal
0.0
386
Normal
0.0
568
Normal
0.0
862
Normal
0.0
1022
Normal
0.0
132
Normal
0.0
278
Normal
0.0
218
Normal
0.0
1031
Tumor
0.0
744
Normal
0.0
367
Tumor
0.0
572
Normal
0.0
695
Tumor
0.0
873
Tumor
0.0
713
Tumor
0.0
314
Normal
0.0
352
Normal
0.0
723
Tumor
0.0
328
Normal
0.0
924
Normal
0.0
427
Tumor
0.0
332
Normal
-0.1
642
Normal
-0.1
213
Tumor
-0.1
535
Tumor
-0.1
446
Normal
-0.1
857
Tumor
-0.1
214
Normal
-0.1
957
Tumor
-0.1
172
Normal
-0.1
741
Tumor
-0.1
123
Tumor
-0.1
114
Normal
-0.1
461
Tumor
-0.1
112
Tumor
-0.1
865
Tumor
-0.1
161
Tumor
-0.1
262
Normal
-0.1
387
Tumor
-0.1
742
Normal
-0.1
131
Tumor
-0.1
428
Normal
-0.1
217
Tumor
-0.1
915
Tumor
-0.1
297
Tumor
-0.1
127
Tumor
-0.1
342
Normal
-0.1
113
Tumor
-0.1
818
Normal
-0.1
636
Normal
-0.1
327
Tumor
-0.1
388
Normal
-0.1
938
Normal
-0.1
191
Tumor
-0.1
477
Tumor
-0.1
258
Normal
-0.1
426
Normal
-0.1
211
Tumor
-0.1
355
Tumor
-0.1
145
Tumor
-0.1
1043
Tumor
-0.1
867
Tumor
-0.1
186
Normal
-0.1
358
Normal
-0.1
232
Normal
-0.1
354
Normal
-0.1
1015
Tumor
-0.2
221
Tumor
-0.2
923
Tumor
-0.2
641
Tumor
-0.2
137
Tumor
-0.2
977
Tumor
-0.2
368
Normal
-0.2
925
Tumor
-0.2
351
Tumor
-0.2
571
Tumor
-0.2
635
Tumor
-0.2
465
Tumor
-0.2
443
Tumor
-0.2
497
Tumor
-0.2
285
Tumor
-0.2
141
Tumor
-0.2
451
Tumor
-0.2
195
Tumor
-0.2
341
Tumor
-0.2
267
Tumor
-0.3
663
Tumor
-0.3
517
Tumor
-0.3
353
Tumor
-0.3
1041
Tumor
-0.3
671
Tumor
-0.3
911
Tumor
-0.3
363
Tumor
-0.3
967
Tumor
-0.4
937
Tumor
-0.4
463
Tumor
-0.4
227
Tumor
-0.4
357
Tumor
-0.4
423
Tumor
-0.5
331
Tumor
-0.5
743
Tumor
-0.5
877
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
