HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:18.8 nTPM
HPA Brain:18.8 nTPM
GTEx:18.8 nTPM
FANTOM5:42.4 Scaled Tags Per Million
Pig:32.5 nTPM
Mouse:19.0 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003351Antibody HPA003355Antibody CAB021892
Glial cells MediumMediumNot detected
Neuronal cells Not detectedMediumLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 18.8
Sample id Sample description nTPM
Hippocampus
nTPM: 16.9
2621 Female, age 67, right hemisphere 24.5
1898 Male, age 80, left hemisphere 18.4
2529 Female, age 94, left hemisphere 15.6
1855 Male, age 76, left hemisphere 15.5
2148 Female, age 91, left hemisphere 13.7
1911 Female, age 85, right hemisphere 13.6
Dentate gyrus
nTPM: 15.5
2530 Female, age 94, left hemisphere 23.0
2010 Male, age 76, both hemispheres 17.3
1927 Female, age 91, both hemispheres 15.0
2246 Female, age 85, both hemispheres 13.9
2531 Female, age 67, both hemispheres 13.8
2528 Male, age 74, both hemispheres 9.8
Entorhinal gyrus
nTPM: 17.0
1787 Male, age 76, left hemisphere 19.4
2613 Female, age 94, left hemisphere 19.0
2764 Male, age 80, right hemisphere 16.2
2117 Female, age 91, right hemisphere 15.8
1938 Female, age 85, left hemisphere 15.7
2686 Male, age 75, right hemisphere 15.7
Hippocampus, CA1
nTPM: 14.7
2749 Male, age 80, left hemisphere 19.6
1873 Female, age 85, both hemispheres 16.8
2527 Male, age 74, both hemispheres 13.3
2045 Male, age 76, both hemispheres 13.2
2082 Female, age 91, right hemisphere 10.7
Hippocampus, CA2
nTPM: 17.8
1963 Male, age 80, left hemisphere 24.4
1892 Male, age 76, both hemispheres 21.7
1940 Female, age 85, left hemisphere 18.8
2437 Female, age 94, left hemisphere 16.4
2249 Male, age 74, both hemispheres 13.3
2113 Female, age 91, right hemisphere 12.0
Hippocampus, CA3
nTPM: 16.4
2436 Male, age 74, both hemispheres 27.9
1867 Male, age 76, both hemispheres 17.7
1891 Female, age 85, both hemispheres 15.3
2861 Female, age 67, both hemispheres 14.7
2620 Female, age 94, left hemisphere 12.3
2137 Male, age 80, left hemisphere 10.8
Parahippocampal cortex
nTPM: 17.0
2250 Female, age 67, right hemisphere 20.6
2532 Female, age 72, left hemisphere 19.5
2245 Female, age 91, both hemispheres 18.7
1850 Male, age 80, both hemispheres 18.0
1990 Female, age 91, right hemisphere 17.5
2018 Male, age 76, both hemispheres 16.0
1933 Female, age 85, both hemispheres 15.5
2693 Female, age 94, both hemispheres 15.3
2622 Female, age 67, right hemisphere 15.1
2692 Male, age 74, both hemispheres 14.2
Perirhinal gyrus
nTPM: 18.8
1847 Female, age 91, left hemisphere 20.8
2521 Female, age 94, right hemisphere 20.7
2848 Male, age 76, right hemisphere 17.8
1841 Female, age 85, right hemisphere 17.6
1794 Male, age 80, right hemisphere 17.0
Subiculum
nTPM: 15.2
1977 Female, age 85, both hemispheres 17.6
2438 Female, age 94, left hemisphere 17.3
2619 Male, age 74, both hemispheres 16.3
1901 Male, age 80, both hemispheres 15.5
2042 Male, age 76, both hemispheres 14.1
2729 Female, age 91, right hemisphere 10.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 18.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.8
Samples: 197

Max nTPM: 33.7
Min nTPM: 8.4
Std nTPM: 4.3
Median nTPM: 18.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 33.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 31.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 31.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 30.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 28.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 28.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 27.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 26.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 26.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 25.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 25.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 42.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.4
FF:10153-102I9 76 years, female 52.6
FF:10169-103B7 60 years, female 32.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 32.5
Pig sample Sample description nTPM
Subiculum
nTPM: 32.6
Samples: 4

Max nTPM: 34.4
Min nTPM: 28.5
Sample A Female 28.5
Sample B Female 33.0
Sample C Male 34.4
Sample D Male 34.3
Dorsal hippocampus
nTPM: 26.5
Samples: 4

Max nTPM: 29.6
Min nTPM: 23.6
Sample A Female 27.9
Sample B Female 24.7
Sample C Male 23.6
Sample D Male 29.6
Entorhinal cortex
nTPM: 25.4
Samples: 4

Max nTPM: 29.5
Min nTPM: 21.5
Sample A Female 29.5
Sample B Female 21.5
Sample C Male 26.5
Sample D Male 23.9
Ventral hippocampus
nTPM: 21.5
Samples: 4

Max nTPM: 24.2
Min nTPM: 17.3
Sample A Female 24.2
Sample B Female 20.8
Sample C Male 23.7
Sample D Male 17.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 19.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.0
Samples: 4

Max nTPM: 23.3
Min nTPM: 16.5
Sample A Male 16.5
Sample B Male 17.4
Sample C Female 18.8
Sample D Female 23.3
Hippocampal formation
nTPM: 16.4
Samples: 4

Max nTPM: 18.7
Min nTPM: 14.9
Sample A Male 16.2
Sample B Male 14.9
Sample C Female 18.7
Sample D Female 15.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
71832806 Antisense, RP_051005_03_F11, Mouse strain C57BL/6J (56 days, male) 1.3
74272906 Antisense, RP_051005_03_F11, Mouse strain C57BL/6J (56 days, male) 0.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org