HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:6.0 nTPM
HPA Brain:12.8 nTPM
GTEx:6.0 nTPM
FANTOM5:24.2 Scaled Tags Per Million
Pig:10.0 nTPM
Mouse:8.5 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020389
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 12.8
Sample id Sample description nTPM
Hippocampus
nTPM: 12.8
1911 Female, age 85, right hemisphere 14.5
1898 Male, age 80, left hemisphere 13.4
2529 Female, age 94, left hemisphere 12.8
2148 Female, age 91, left hemisphere 12.4
1855 Male, age 76, left hemisphere 11.9
2621 Female, age 67, right hemisphere 11.6
Dentate gyrus
nTPM: 11.7
2246 Female, age 85, both hemispheres 12.5
1927 Female, age 91, both hemispheres 12.2
2010 Male, age 76, both hemispheres 12.1
2528 Male, age 74, both hemispheres 11.8
2531 Female, age 67, both hemispheres 11.2
2530 Female, age 94, left hemisphere 10.2
Entorhinal gyrus
nTPM: 11.7
2117 Female, age 91, right hemisphere 13.3
1938 Female, age 85, left hemisphere 13.2
1787 Male, age 76, left hemisphere 11.9
2686 Male, age 75, right hemisphere 11.2
2764 Male, age 80, right hemisphere 10.6
2613 Female, age 94, left hemisphere 10.1
Hippocampus, CA1
nTPM: 12.2
1873 Female, age 85, both hemispheres 13.6
2045 Male, age 76, both hemispheres 13.0
2082 Female, age 91, right hemisphere 12.1
2527 Male, age 74, both hemispheres 12.0
2749 Male, age 80, left hemisphere 10.4
Hippocampus, CA2
nTPM: 12.5
1892 Male, age 76, both hemispheres 13.0
2249 Male, age 74, both hemispheres 13.0
1963 Male, age 80, left hemisphere 12.6
2437 Female, age 94, left hemisphere 12.3
2113 Female, age 91, right hemisphere 12.0
1940 Female, age 85, left hemisphere 11.9
Hippocampus, CA3
nTPM: 12.1
2436 Male, age 74, both hemispheres 13.6
1867 Male, age 76, both hemispheres 13.3
1891 Female, age 85, both hemispheres 13.2
2620 Female, age 94, left hemisphere 11.1
2137 Male, age 80, left hemisphere 10.8
2861 Female, age 67, both hemispheres 10.8
Parahippocampal cortex
nTPM: 11.5
2018 Male, age 76, both hemispheres 14.0
1933 Female, age 85, both hemispheres 13.2
2250 Female, age 67, right hemisphere 11.9
2692 Male, age 74, both hemispheres 11.9
2693 Female, age 94, both hemispheres 11.9
1850 Male, age 80, both hemispheres 11.1
2532 Female, age 72, left hemisphere 11.1
1990 Female, age 91, right hemisphere 10.8
2245 Female, age 91, both hemispheres 10.2
2622 Female, age 67, right hemisphere 8.8
Perirhinal gyrus
nTPM: 11.6
1841 Female, age 85, right hemisphere 12.1
1847 Female, age 91, left hemisphere 11.8
2521 Female, age 94, right hemisphere 11.6
1794 Male, age 80, right hemisphere 11.3
2848 Male, age 76, right hemisphere 11.2
Subiculum
nTPM: 12.4
2042 Male, age 76, both hemispheres 13.6
1977 Female, age 85, both hemispheres 13.4
2729 Female, age 91, right hemisphere 13.4
1901 Male, age 80, both hemispheres 12.8
2619 Male, age 74, both hemispheres 11.5
2438 Female, age 94, left hemisphere 9.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 6.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.0
Samples: 197

Max nTPM: 11.5
Min nTPM: 1.4
Std nTPM: 1.9
Median nTPM: 5.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 11.5
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 10.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 10.6
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 10.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 10.4
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 10.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 10.1
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 10.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 9.9
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 9.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 9.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 24.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.2
FF:10169-103B7 60 years, female 28.0
FF:10153-102I9 76 years, female 20.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 10.0
Pig sample Sample description nTPM
Subiculum
nTPM: 9.7
Samples: 4

Max nTPM: 9.9
Min nTPM: 9.2
Sample A Female 9.9
Sample B Female 9.9
Sample C Male 9.2
Sample D Male 9.6
Dorsal hippocampus
nTPM: 10.0
Samples: 4

Max nTPM: 11.0
Min nTPM: 8.6
Sample A Female 10.4
Sample B Female 10.1
Sample C Male 11.0
Sample D Male 8.6
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 10.2
Min nTPM: 7.5
Sample A Female 8.7
Sample B Female 10.2
Sample C Male 9.4
Sample D Male 7.5
Ventral hippocampus
nTPM: 9.2
Samples: 4

Max nTPM: 9.5
Min nTPM: 8.7
Sample A Female 9.3
Sample B Female 9.5
Sample C Male 8.7
Sample D Male 9.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 8.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.8
Samples: 4

Max nTPM: 8.5
Min nTPM: 7.2
Sample A Male 7.8
Sample B Male 7.2
Sample C Female 8.5
Sample D Female 7.8
Hippocampal formation
nTPM: 8.5
Samples: 4

Max nTPM: 8.9
Min nTPM: 8.1
Sample A Male 8.2
Sample B Male 8.9
Sample C Female 8.7
Sample D Female 8.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
75774112 Antisense, RP_060530_01_B08, Mouse strain C57BL/6J (56 days, male) 1.1
293255 Antisense, RP_040617_01_A02, Mouse strain C57BL/6J (56 days, male) 0.4

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