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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
111.1
nTPM
HPA Brain:
269.0
nTPM
GTEx:
111.1
nTPM
FANTOM5:
142.2
Scaled Tags Per Million
Pig:
79.7
nTPM
Mouse:
8.8
nTPM
Allen mouse:
4.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
269.0
Sample id
Sample description
nTPM
Amygdala nTPM: 203.9
2695
Female, age 67, right hemisphere
337.4
2814
Male, age 76, right hemisphere
229.4
2517
Female, age 94, left hemisphere
156.2
1987
Female, age 91, left hemisphere
155.8
2514
Male, age 75, right hemisphere
140.7
Basal amygdala nTPM: 191.9
2827
Female, age 67, right hemisphere
365.2
2609
Male, age 75, right hemisphere
189.4
2685
Female, age 94, left hemisphere
181.4
1955
Male, age 76, both hemispheres
152.8
2110
Male, age 80, left hemisphere
148.2
2243
Female, age 91, right hemisphere
114.1
Central amygdala nTPM: 240.0
2826
Female, age 94, left hemisphere
471.6
1905
Male, age 76, both hemispheres
211.7
2515
Male, age 75, right hemisphere
195.0
2701
Female, age 91, right hemisphere
165.7
2239
Male, age 80, left hemisphere
156.1
Corticomedial amygdala nTPM: 126.9
2535
Female, age 67, right hemisphere
198.7
2428
Male, age 75, right hemisphere
154.9
2240
Male, age 76, both hemispheres
115.3
2829
Male, age 80, left hemisphere
112.9
2429
Female, age 94, left hemisphere
96.8
2242
Female, age 91, right hemisphere
82.8
Lateral amygdala nTPM: 269.0
2830
Female, age 67, right hemisphere
486.7
2516
Male, age 75, right hemisphere
286.0
2534
Female, age 94, left hemisphere
261.4
2256
Male, age 80, left hemisphere
224.8
1883
Male, age 76, both hemispheres
188.2
2255
Female, age 91, right hemisphere
166.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
111.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 111.1
Samples: 152
Max nTPM: 480.5
Min nTPM: 19.4
Std nTPM: 73.0
Median nTPM: 88.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
480.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
362.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
329.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
318.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
308.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
291.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
273.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
272.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
261.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
258.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
255.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
226.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
211.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
208.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
203.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
200.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
199.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
196.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
186.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
183.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
177.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
168.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
165.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
164.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
163.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
159.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
159.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
155.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
155.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
152.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
151.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
151.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
150.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
144.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
143.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
142.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
142.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
136.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
136.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
135.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
135.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
132.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
130.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
127.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
126.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
126.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
126.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
125.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
125.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
122.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
122.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
121.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
117.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
117.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
116.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
113.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
113.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
113.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
110.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
108.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
108.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
106.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
105.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
102.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
100.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
98.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
98.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
97.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
96.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
95.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
93.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
93.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
91.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
90.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
89.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
89.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
87.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
86.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
85.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
85.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
83.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
81.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
81.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
80.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
80.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
79.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
78.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
76.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
75.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
75.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
74.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
74.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
72.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
72.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
72.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
72.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
71.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
70.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
69.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
69.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
69.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
69.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
68.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
67.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
67.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
66.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
66.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
65.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
64.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
64.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
63.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
63.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
63.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
61.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
61.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
60.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
60.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
59.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
59.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
59.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
58.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
58.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
57.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
56.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
56.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
55.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
55.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
54.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
54.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
53.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
52.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
50.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
49.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
48.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
48.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
48.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
45.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
45.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
45.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
44.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
43.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
41.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
41.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
41.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
41.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
39.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
39.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
38.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
34.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
28.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
21.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
19.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
8.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 8.8
Samples: 4
Max nTPM: 12.0
Min nTPM: 7.3
Sample A
Male
7.6
Sample B
Male
8.4
Sample C
Female
12.0
Sample D
Female
7.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.