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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LECT2 is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
86.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
850.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
601.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
527.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
512.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
479.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
473.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
384.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
350.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
337.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
335.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
334.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
314.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
312.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
303.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
301.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
294.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
285.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
282.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
280.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
268.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
267.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
257.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
253.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
247.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
244.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
238.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
235.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
233.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
230.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
229.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
228.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
224.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
219.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
217.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
215.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
214.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
211.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
208.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
208.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
207.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
206.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
201.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
200.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
195.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
192.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
191.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
190.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
184.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
183.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
182.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
181.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
181.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
180.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
177.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
176.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
175.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
175.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
172.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
171.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
165.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
163.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
162.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
156.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
156.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
153.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
150.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
148.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
147.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
145.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
145.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
145.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
143.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
140.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
137.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
135.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
132.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
132.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
131.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
130.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
130.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
128.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
128.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
126.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
126.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
124.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
123.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
123.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
123.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
122.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
121.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
120.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
119.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
117.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
117.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
116.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
115.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
113.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
113.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
111.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
109.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
108.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
106.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
105.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
105.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
104.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
103.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
103.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
102.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
102.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
102.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
101.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
97.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
97.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
96.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
95.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
95.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
95.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
94.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
93.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
93.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
93.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
92.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
91.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
90.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
89.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
86.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
83.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
82.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
82.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
81.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
81.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
80.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
80.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
79.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
79.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
78.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
78.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
78.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
77.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
77.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
76.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
76.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
76.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
75.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
75.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
75.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
74.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
73.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
73.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
73.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
73.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
72.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
72.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
72.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
71.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
70.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
70.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
70.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
70.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
69.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
68.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
67.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
67.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
67.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
66.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
65.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
62.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
62.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
62.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
62.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
60.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
60.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
58.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
58.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
58.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
58.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
57.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
56.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
55.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
55.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
54.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
54.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
54.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
53.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
53.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
51.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
51.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
50.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
50.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
49.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
49.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
49.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
49.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
48.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
48.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
48.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
46.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
45.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
44.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
44.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
43.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
42.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
42.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
42.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
41.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
41.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
40.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
40.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
40.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
39.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
38.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
38.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
38.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
37.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
37.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
37.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
37.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
37.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
36.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
36.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
36.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
34.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
33.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
33.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
32.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
31.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
31.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
31.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
31.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
30.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
30.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
30.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
30.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
30.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
30.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
29.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
29.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
29.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
27.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
27.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
26.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
26.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
25.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
25.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
24.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
24.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
23.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
22.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
21.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
21.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
21.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
21.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
21.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
21.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
20.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
20.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
20.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
19.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
18.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
17.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
17.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
17.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
16.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
15.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
15.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
15.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
15.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
14.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
14.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
14.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
13.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
13.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
13.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
13.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
13.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
12.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
12.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
11.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
11.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
11.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
11.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
10.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
9.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
9.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
9.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
9.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
8.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
7.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
7.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
7.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
7.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
6.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
6.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
6.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
6.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
6.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
5.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
5.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
5.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
5.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
4.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
4.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
4.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
4.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
2.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
2.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
2.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
2.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
2.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
1.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
1.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
1.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
1.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
1.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
1.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
0.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
0.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
0.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
0.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
0.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
0.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
0.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
0.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
0.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
0.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
0.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
0.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
0.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
0.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
0.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
0.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
0.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
0.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
0.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
0.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
0.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
0.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
0.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LECT2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
93.2
Number of samples
231
Samples
Sample
Description
TPM
DO48721
0 years, female, NA, stage:1, alive, 900 days
884.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
790.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
641.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
471.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
463.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
408.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
406.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
363.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
356.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
343.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
327.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
321.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
319.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
310.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
275.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
273.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
257.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
257.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
254.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
251.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
234.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
228.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
215.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
207.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
200.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
194.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
190.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
188.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
180.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
178.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
178.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
177.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
176.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
175.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
172.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
171.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
170.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
169.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
168.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
167.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
165.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
164.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
161.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
154.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
152.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
151.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
150.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
149.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
149.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
146.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
146.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
145.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
129.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
129.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
129.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
129.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
128.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
123.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
122.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
121.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
120.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
120.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
120.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
119.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
115.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
112.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
112.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
112.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
111.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
110.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
107.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
105.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
104.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
102.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
102.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
101.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
100.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
99.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
95.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
94.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
94.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
94.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
93.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
93.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
90.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
89.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
88.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
86.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
85.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
84.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
79.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
77.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
77.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
76.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
76.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
75.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
75.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
73.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
71.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
67.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
66.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
66.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
66.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
65.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
65.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
65.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
64.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
61.2
DO48716
0 years, male, NA, stage:2, alive, 720 days
60.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
60.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
59.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
58.6
DO50845
0 years, male, NA, stage:3, alive, 210 days
58.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
58.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
57.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
55.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
55.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
51.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
51.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
51.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
50.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
49.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
48.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
47.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
44.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
44.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
44.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
43.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
42.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
42.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
42.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
42.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
41.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
41.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
41.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
41.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
40.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
38.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
37.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
36.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
36.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
34.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
34.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
33.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
33.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
32.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
31.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
31.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
30.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
30.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
29.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
29.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
29.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
29.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
28.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
28.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
28.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
24.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
24.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
24.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
24.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
23.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
22.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
21.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
21.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
20.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
20.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
20.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
19.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
18.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
18.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
16.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
16.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
16.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
14.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
13.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
13.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
12.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
11.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
11.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
10.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
9.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
9.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
9.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
8.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
8.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
8.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
7.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
5.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
5.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
4.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
4.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
3.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
3.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
3.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
2.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
2.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
2.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
2.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
2.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
1.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
1.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
1.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
1.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
1.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
1.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
0.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
0.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
0.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
0.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
0.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
0.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
0.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
0.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
0.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
0.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
0.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
0.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
0.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
0.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
0.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
0.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
0.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
0.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
0.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
0.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
0.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
0.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
0.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
