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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PAM is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
172.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
152.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
100.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
94.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
87.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
86.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
84.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
70.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
67.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
65.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
60.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
57.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
57.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
52.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
52.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
48.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
47.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
46.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
46.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
45.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
45.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
43.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
39.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
39.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
37.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
36.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
35.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
34.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
34.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
32.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
32.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
31.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
31.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
30.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
30.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
29.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
29.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
27.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
27.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
24.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
22.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
21.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
21.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
21.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
21.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
20.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
18.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
18.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
17.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
16.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
15.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
15.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
13.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
12.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
12.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
10.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
9.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
5.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
3.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
2.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PAM is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
153.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
404.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
393.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
365.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
357.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
356.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
346.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
316.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
316.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
312.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
308.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
305.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
305.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
302.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
301.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
297.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
294.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
293.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
291.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
290.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
289.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
283.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
282.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
277.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
275.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
275.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
274.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
273.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
273.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
270.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
268.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
266.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
265.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
265.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
265.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
263.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
259.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
258.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
257.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
254.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
254.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
253.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
250.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
249.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
246.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
246.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
246.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
244.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
244.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
243.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
241.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
240.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
239.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
236.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
236.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
235.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
235.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
235.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
235.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
234.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
233.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
233.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
232.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
232.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
231.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
231.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
229.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
228.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
228.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
227.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
227.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
227.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
226.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
226.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
225.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
224.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
222.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
222.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
221.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
220.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
220.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
219.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
218.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
218.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
218.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
216.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
216.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
216.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
216.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
216.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
215.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
214.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
212.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
212.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
212.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
212.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
211.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
209.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
209.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
208.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
208.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
207.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
206.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
206.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
206.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
205.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
203.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
203.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
203.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
202.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
202.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
202.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
201.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
201.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
201.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
201.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
201.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
199.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
197.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
194.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
193.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
192.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
189.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
189.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
188.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
188.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
188.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
187.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
187.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
187.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
187.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
186.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
185.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
185.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
185.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
184.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
184.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
184.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
184.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
183.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
183.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
183.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
183.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
182.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
182.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
181.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
180.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
180.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
180.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
180.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
180.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
180.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
179.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
179.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
179.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
178.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
177.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
177.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
177.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
177.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
177.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
177.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
177.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
177.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
176.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
176.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
175.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
175.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
175.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
175.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
175.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
174.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
174.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
173.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
173.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
173.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
173.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
172.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
171.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
171.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
171.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
171.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
171.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
171.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
171.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
170.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
170.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
170.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
169.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
169.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
168.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
168.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
168.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
167.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
167.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
167.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
167.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
166.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
166.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
166.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
166.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
165.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
164.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
164.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
164.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
163.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
163.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
163.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
162.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
162.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
162.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
162.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
162.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
161.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
161.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
161.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
161.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
161.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
160.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
160.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
160.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
160.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
160.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
159.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
159.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
159.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
159.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
159.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
158.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
158.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
157.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
157.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
157.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
157.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
157.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
156.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
155.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
155.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
155.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
155.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
154.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
154.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
153.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
153.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
153.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
152.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
152.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
152.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
152.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
151.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
150.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
150.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
150.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
150.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
150.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
150.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
149.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
149.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
149.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
149.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
149.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
148.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
147.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
147.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
147.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
147.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
147.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
147.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
146.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
146.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
146.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
145.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
145.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
145.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
145.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
145.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
144.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
144.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
144.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
143.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
143.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
142.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
142.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
142.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
142.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
142.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
141.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
140.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
140.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
140.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
140.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
140.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
139.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
139.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
139.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
139.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
138.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
138.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
138.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
137.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
136.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
135.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
135.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
135.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
135.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
134.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
134.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
134.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
133.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
132.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
132.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
132.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
132.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
132.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
132.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
131.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
131.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
131.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
130.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
130.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
130.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
129.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
129.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
129.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
129.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
129.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
129.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
129.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
129.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
128.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
128.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
128.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
128.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
128.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
127.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
127.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
127.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
127.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
125.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
125.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
124.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
124.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
124.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
124.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
123.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
123.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
122.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
122.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
122.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
120.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
120.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
119.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
119.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
119.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
119.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
118.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
118.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
118.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
118.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
118.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
118.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
117.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
117.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
117.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
117.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
117.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
116.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
116.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
115.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
115.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
115.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
115.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
115.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
114.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
114.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
114.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
113.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
112.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
112.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
112.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
111.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
111.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
111.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
111.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
111.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
110.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
110.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
110.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
110.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
109.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
109.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
109.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
108.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
107.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
107.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
107.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
107.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
107.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
107.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
107.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
107.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
107.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
106.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
106.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
106.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
106.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
105.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
104.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
104.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
104.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
103.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
103.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
103.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
102.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
102.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
101.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
101.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
100.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
99.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
99.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
99.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
98.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
98.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
98.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
97.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
96.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
96.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
96.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
95.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
95.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
95.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
95.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
94.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
94.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
92.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
92.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
91.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
90.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
90.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
90.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
90.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
89.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
89.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
88.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
87.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
87.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
86.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
86.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
84.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
84.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
83.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
83.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
83.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
83.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
83.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
83.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
83.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
82.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
81.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
80.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
80.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
78.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
78.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
77.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
77.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
76.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
75.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
74.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
72.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
71.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
71.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
71.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
71.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
70.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
69.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
66.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
66.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
64.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
64.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
64.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
64.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
64.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
62.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
62.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
61.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
59.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
58.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
58.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
56.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
55.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
55.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
54.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
51.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
51.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
48.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
47.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
46.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
45.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
44.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
44.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
43.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
43.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
43.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
42.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
39.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
39.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
38.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
37.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
36.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
36.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
35.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
31.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
28.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
28.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
26.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
25.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
24.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
24.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
22.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
13.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
13.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PAM is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
198.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
552.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
468.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
392.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
337.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
324.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
322.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
319.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
311.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
311.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
306.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
303.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
298.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
297.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
295.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
287.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
281.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
277.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
267.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
263.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
261.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
253.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
245.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
245.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
244.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
242.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
242.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
240.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
238.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
237.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
234.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
232.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
231.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
230.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
227.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
226.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
223.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
222.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
221.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
216.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
209.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
208.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
206.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
205.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
202.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
200.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
195.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
193.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
192.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
189.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
187.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
186.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
183.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
183.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
182.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
178.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
176.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
175.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
175.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
172.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
169.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
169.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
167.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
166.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
166.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
165.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
163.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
163.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
160.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
159.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
157.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
155.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
154.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
152.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
151.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
151.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
140.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
137.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
135.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
133.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
132.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
126.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
125.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
118.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
115.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
108.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
107.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
104.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
100.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
97.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
95.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
90.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
89.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
77.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
76.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
75.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
71.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
65.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
62.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PAM is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
96.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
390.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
349.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
326.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
306.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
273.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
267.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
246.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
241.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
217.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
215.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
204.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
203.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
202.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
198.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
195.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
193.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
190.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
182.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
177.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
169.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
169.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
167.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
165.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
163.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
161.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
158.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
155.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
155.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
152.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
152.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
152.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
152.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
151.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
150.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
148.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
148.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
148.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
146.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
144.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
140.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
139.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
138.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
137.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
135.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
134.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
134.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
133.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
131.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
131.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
130.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
129.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
129.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
128.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
128.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
127.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
126.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
124.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
122.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
122.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
121.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
121.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
120.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
120.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
120.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
119.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
119.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
119.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
119.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
118.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
117.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
116.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
116.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
116.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
114.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
114.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
114.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
113.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
112.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
112.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
112.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
112.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
111.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
111.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
110.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
108.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
108.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
108.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
107.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
107.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
107.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
107.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
106.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
105.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
105.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
105.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
105.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
104.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
104.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
104.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
104.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
103.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
102.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
101.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
101.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
101.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
101.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
101.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
101.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
100.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
100.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
100.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
100.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
99.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
98.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
98.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
98.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
97.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
97.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
97.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
97.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
96.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
96.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
95.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
95.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
95.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
95.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
94.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
94.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
94.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
94.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
94.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
94.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
93.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
93.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
93.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
91.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
91.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
91.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
91.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
90.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
90.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
89.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
89.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
89.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
88.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
88.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
88.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
88.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
87.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
86.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
86.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
86.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
84.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
84.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
84.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
84.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
83.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
83.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
82.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
80.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
80.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
80.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
79.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
79.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
79.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
78.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
78.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
78.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
78.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
78.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
77.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
77.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
77.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
76.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
75.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
75.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
74.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
74.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
73.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
73.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
73.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
73.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
73.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
72.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
71.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
71.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
71.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
70.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
70.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
69.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
69.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
69.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
69.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
68.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
68.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
68.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
68.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
68.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
67.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
67.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
66.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
66.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
66.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
66.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
66.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
65.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
65.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
65.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
65.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
64.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
64.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
63.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
63.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
61.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
61.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
61.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
61.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
61.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
61.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
60.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
60.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
59.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
58.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
58.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
57.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
57.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
56.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
55.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
55.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
54.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
54.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
53.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
53.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
53.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
52.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
52.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
52.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
52.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
51.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
50.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
49.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
49.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
49.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
48.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
48.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
47.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
47.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
47.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
45.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
45.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
44.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
43.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
43.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
40.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
39.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
39.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
38.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
37.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
36.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
35.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
34.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
33.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
33.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
33.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
32.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
31.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
30.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
30.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
30.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
28.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
28.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
27.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
26.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
26.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
24.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
19.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
18.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
18.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
17.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
17.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
8.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
7.6
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0086820003
Tumor
1.5
CPT0076330003
Tumor
1.5
CPT0084560003
Tumor
1.4
CPT0063630003
Tumor
0.9
CPT0065430003
Tumor
0.9
CPT0014160003
Tumor
0.9
CPT0002350011
Tumor
0.8
CPT0020120003
Tumor
0.7
CPT0001340003
Tumor
0.7
CPT0079230003
Tumor
0.6
CPT0001260009
Tumor
0.6
CPT0086950003
Tumor
0.6
CPT0012280003
Tumor
0.6
CPT0010110003
Tumor
0.6
CPT0015730003
Tumor
0.5
CPT0024680001
Normal
0.5
CPT0025050003
Tumor
0.5
CPT0025290003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0001500009
Tumor
0.5
CPT0026420001
Normal
0.5
CPT0077310003
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0012290003
Normal
0.4
CPT0025110003
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0010120001
Normal
0.4
CPT0063320003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0092290003
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0025580004
Tumor
0.4
CPT0092730003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0066520001
Normal
0.3
CPT0065930003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0015910003
Tumor
0.3
CPT0002370001
Normal
0.3
CPT0009000003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0077320001
Normal
0.2
CPT0024670003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0000660001
Normal
0.2
CPT0001270001
Normal
0.2
CPT0069000003
Tumor
0.2
CPT0063640001
Normal
0.2
CPT0092190003
Normal
0.2
CPT0000640003
Tumor
0.2
CPT0077500001
Normal
0.2
CPT0081880003
Tumor
0.2
CPT0012090003
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0017850003
Tumor
0.1
CPT0088760003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0088970003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0001190001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0065810003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0077110003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0017410003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0025350003
Tumor
-0.1
CPT0001220008
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0011410003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0000790001
Normal
-0.2
CPT0078830003
Tumor
-0.2
CPT0087050003
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0088690003
Tumor
-0.2
CPT0023710001
Normal
-0.2
CPT0023690003
Tumor
-0.2
CPT0014130001
Normal
-0.3
CPT0006440003
Tumor
-0.3
CPT0079300001
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0019990003
Tumor
-0.3
CPT0006630003
Tumor
-0.3
CPT0079000001
Normal
-0.3
CPT0078990003
Tumor
-0.3
CPT0081620001
Normal
-0.3
CPT0006950001
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0017450001
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0078510003
Tumor
-0.3
CPT0079430001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0079410003
Tumor
-0.3
CPT0025610001
Normal
-0.3
CPT0088630003
Tumor
-0.3
CPT0064400001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0012370003
Tumor
-0.3
CPT0025060001
Normal
-0.4
CPT0092740003
Normal
-0.4
CPT0088570001
Normal
-0.4
CPT0019160001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0078670001
Normal
-0.4
CPT0001550001
Normal
-0.4
CPT0009080003
Normal
-0.4
CPT0000780007
Tumor
-0.5
CPT0001180009
Tumor
-0.5
CPT0077490003
Tumor
-0.6
CPT0078660003
Tumor
-0.6
CPT0001230001
Normal
-0.6
CPT0007470001
Normal
-0.6
CPT0012180003
Tumor
-0.6
CPT0026410003
Tumor
-0.7
CPT0086870003
Tumor
-0.7
CPT0002270011
Tumor
-0.7
CPT0088550004
Tumor
-0.8
CPT0079180003
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
